prot_F-serratus_M_contig637.17276.1 (polypeptide) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig637.17276.1 vs. uniprot
Match: A0A6H5KEU9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEU9_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 7.520e-15 Identity = 34/64 (53.12%), Postives = 42/64 (65.62%), Query Frame = 0
Query: 1 MIAVFGNEKGLAMYHLDVSQAFVQAPLKEDTILRLPPGCGERYGKLVRLLSGQYSLKQAGREWY 64
M+A E L + H D+ QAFV+AP KEDT +RLP GCG GK+V+L Y L+QA REWY
Sbjct: 198 MLAALACELDLELCHFDIDQAFVRAPFKEDTFMRLPEGCGALSGKIVQLNKSLYGLRQASREWY 261
BLAST of mRNA_F-serratus_M_contig637.17276.1 vs. uniprot
Match: A0A6H5KAC2_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAC2_9PHAE) HSP 1 Score: 58.9 bits (141), Expect = 1.540e-8 Identity = 27/50 (54.00%), Postives = 31/50 (62.00%), Query Frame = 0
Query: 15 HLDVSQAFVQAPLKEDTILRLPPGCGERYGKLVRLLSGQYSLKQAGREWY 64
H QAFVQ+ L E +RLPP CG R GK+VRL Y LKQA R W+
Sbjct: 1475 HFYAEQAFVQSELDEVVFIRLPPACGARSGKVVRLRRSLYGLKQASRTWH 1524
BLAST of mRNA_F-serratus_M_contig637.17276.1 vs. uniprot
Match: A0A6H5JWT4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT4_9PHAE) HSP 1 Score: 55.8 bits (133), Expect = 1.850e-7 Identity = 23/48 (47.92%), Postives = 33/48 (68.75%), Query Frame = 0
Query: 17 DVSQAFVQAPLKEDTILRLPPGCGERYGKLVRLLSGQYSLKQAGREWY 64
DV QAFV++ L+ED +RLP GCG+ G +V+L Y L+Q R+W+
Sbjct: 616 DVEQAFVRSELEEDVYMRLPQGCGDLSGMIVKLGKSLYGLRQTSRQWH 663
BLAST of mRNA_F-serratus_M_contig637.17276.1 vs. uniprot
Match: F2U8R8_SALR5 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U8R8_SALR5) HSP 1 Score: 48.9 bits (115), Expect = 1.290e-5 Identity = 28/58 (48.28%), Postives = 36/58 (62.07%), Query Frame = 0
Query: 13 MYHLDVSQAFVQAPLKEDTILRLPP-----GCG-ERY-GKLVRLLSGQYSLKQAGREW 63
++ LD A++QA LKE+ + LPP G G +RY GK+ RLL Y LKQAGR W
Sbjct: 64 LHQLDFKSAYLQADLKEELYMELPPHFTDIGDGAQRYAGKVCRLLKPLYGLKQAGRAW 121
BLAST of mRNA_F-serratus_M_contig637.17276.1 vs. uniprot
Match: F2U8R5_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U8R5_SALR5) HSP 1 Score: 49.7 bits (117), Expect = 2.800e-5 Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 0
Query: 13 MYHLDVSQAFVQAPLKEDTILRLPP-----GCG-ERY-GKLVRLLSGQYSLKQAGREW 63
++ LD A++QA LKE+ ++LPP G G +RY GK+ RLL Y LKQAGR W
Sbjct: 737 LHQLDFKSAYLQADLKEELYMKLPPHFTDIGDGAQRYAGKVCRLLKPLYGLKQAGRAW 794
BLAST of mRNA_F-serratus_M_contig637.17276.1 vs. uniprot
Match: F2U082_SALR5 (CCHC-type domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U082_SALR5) HSP 1 Score: 49.7 bits (117), Expect = 2.810e-5 Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 0
Query: 13 MYHLDVSQAFVQAPLKEDTILRLPP-----GCG-ERY-GKLVRLLSGQYSLKQAGREW 63
++ LD A++QA LKE+ ++LPP G G +RY GK+ RLL Y LKQAGR W
Sbjct: 809 LHQLDFKSAYLQADLKEELYMKLPPHFTDIGDGAQRYAGKVCRLLKPLYGLKQAGRAW 866
BLAST of mRNA_F-serratus_M_contig637.17276.1 vs. uniprot
Match: F2U081_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U081_SALR5) HSP 1 Score: 49.7 bits (117), Expect = 2.810e-5 Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 0
Query: 13 MYHLDVSQAFVQAPLKEDTILRLPP-----GCG-ERY-GKLVRLLSGQYSLKQAGREW 63
++ LD A++QA LKE+ ++LPP G G +RY GK+ RLL Y LKQAGR W
Sbjct: 467 LHQLDFKSAYLQADLKEELYMKLPPHFTDIGDGAQRYAGKVCRLLKPLYGLKQAGRAW 524
BLAST of mRNA_F-serratus_M_contig637.17276.1 vs. uniprot
Match: F2U4Z2_SALR5 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U4Z2_SALR5) HSP 1 Score: 48.9 bits (115), Expect = 4.970e-5 Identity = 28/58 (48.28%), Postives = 36/58 (62.07%), Query Frame = 0
Query: 13 MYHLDVSQAFVQAPLKEDTILRLPP-----GCG-ERY-GKLVRLLSGQYSLKQAGREW 63
++ LD A++QA LKE+ + LPP G G +RY GK+ RLL Y LKQAGR W
Sbjct: 85 LHQLDFKSAYLQADLKEELYMELPPHFTDIGDGAQRYAGKVCRLLKPLYGLKQAGRAW 142
BLAST of mRNA_F-serratus_M_contig637.17276.1 vs. uniprot
Match: F2UTR2_SALR5 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UTR2_SALR5) HSP 1 Score: 48.9 bits (115), Expect = 5.120e-5 Identity = 28/58 (48.28%), Postives = 36/58 (62.07%), Query Frame = 0
Query: 13 MYHLDVSQAFVQAPLKEDTILRLPP-----GCG-ERY-GKLVRLLSGQYSLKQAGREW 63
++ LD A++QA LKE+ + LPP G G +RY GK+ RLL Y LKQAGR W
Sbjct: 297 LHQLDFKSAYLQADLKEELYMELPPHFTDIGDGAQRYAGKVCRLLKPLYGLKQAGRAW 354
BLAST of mRNA_F-serratus_M_contig637.17276.1 vs. uniprot
Match: F2U501_SALR5 (Integrase catalytic domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U501_SALR5) HSP 1 Score: 48.9 bits (115), Expect = 5.160e-5 Identity = 28/58 (48.28%), Postives = 36/58 (62.07%), Query Frame = 0
Query: 13 MYHLDVSQAFVQAPLKEDTILRLPP-----GCG-ERY-GKLVRLLSGQYSLKQAGREW 63
++ LD A++QA LKE+ + LPP G G +RY GK+ RLL Y LKQAGR W
Sbjct: 476 LHQLDFKSAYLQADLKEELYMELPPHFTDIGDGAQRYAGKVCRLLKPLYGLKQAGRAW 533 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig637.17276.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 22
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_F-serratus_M_contig637.17276.1 ID=prot_F-serratus_M_contig637.17276.1|Name=mRNA_F-serratus_M_contig637.17276.1|organism=Fucus serratus male|type=polypeptide|length=66bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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