prot_F-serratus_M_contig630.17160.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig630.17160.1
Unique Nameprot_F-serratus_M_contig630.17160.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1402
Homology
BLAST of mRNA_F-serratus_M_contig630.17160.1 vs. uniprot
Match: D8LS03_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS03_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 4.150e-111
Identity = 259/635 (40.79%), Postives = 321/635 (50.55%), Query Frame = 0
Query:  792 DPTVIARPWDIFLCRYQDAYEEELSLQRLMELGAAFKKPQVGASVAAVPHRPLRATGDHKVGSSTGGGETDLGPGDGRVWRTAAKPGAQRVLGAMSMATLWGHRNK---------DTVISASIHDDAEYFVSEIASLLMQMNANGREVGITYWESPERKCLNDSRLPLPAEEEVFLATRSAAAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQLMAKQQMAKQEAR---IAWNDAPGGWKEHSHCHSGPVIIWRAGPTRSRAKAKGDFVEHCCAALVSTAHVPPGVELMLVDGFLQGTGVLETSTAFRPYRRRAWSPLAVPKGGSFPGKSTEDISKLPP-CTVRLHWRKIIVEVGKVPRKPETLYVCSSRPAAIASAAVSADDWDGSGAPRGLLLGKAEGNGCAAFFSQDEMEIPLGTAPWAALNNKNKNSVNSTIKPT---------SWSRRGGXXXTPAKQPGDQHHYYQGPRLHFQACIVCQRFGENGSGSSSASGGGDNGENLNQNGSDSNGSTSRPSVRGP---GPLLFCSTCPASFHLPCLRPRLRVMPKGAWTESSNGGXXXXXXXXXXWSCAYCYATGRAIGGDSDGACGAVRLMESLRQGMQNAVRVNTKRTLRYKAFG 1401
            D  ++A+P D+F+CR+++ YEE +SL RL +LGA+F   +   + AA               S+  GG  + GPG GR +    KPGAQR+L AMSM++LW H+ +         +TV+SASIHDDAE  V E   LL  M   GRE+G+++WESPERKCLN+  LPLP      LA   AAA XXXXXXXXXXXXXXXX                  R    KQ + KQ        W   PGGW E  HCH+ P+++W  GP+R+R +AKG+FV+HC AA++ ++H PPG ELML+DGFL GTGVLE    F+ YRRR W+ L+        G +     KLPP  T RL W+K                                                   +G A           +GTAPW A  +   N    T  P                 XXX             QGP  HF+ACIVCQR G + +G++                 D       P  RGP   GPLL CSTCPA+FHL CLRPRLR MP+G    +  GG          WSCAYC+A GR +GGD+DGACGAVRLMESLRQGM   VRVN  RTLRY A G
Sbjct:    7 DRKIVAKPTDLFVCRFKEGYEENISLARLRQLGASFSFTRAPITAAAFT-------------SAVSGGLANQGPGGGRRFEGPVKPGAQRILDAMSMSSLWNHKMRGGVGPSAKGETVVSASIHDDAELTVHEALRLLKSMKEQGREIGVSFWESPERKCLNECTLPLPPSVLAQLAEEDAAAXXXXXXXXXXXXXXXXXLTKG--------------RVGCGKQGLQKQHPGGVVPVWPKIPGGWAEPRHCHTAPLVVWATGPSRARVRAKGEFVDHCSAAMLGSSHFPPGAELMLMDGFLHGTGVLEKHAVFQRYRRRPWAQLSPEDAPGLQGPA-----KLPPGATTRLQWKK---------------------------------------------------DGAA-----------VGTAPWTAALDSTTNEERKTSTPEIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGP--HFRACIVCQRPGTDSNGAAV----------------DGPAPPCLPQARGPAAAGPLLLCSTCPAAFHLSCLRPRLRKMPEG----TGEGGSAK-------WSCAYCHAMGRVVGGDADGACGAVRLMESLRQGMHGTVRVNAMRTLRYNALG 518          
BLAST of mRNA_F-serratus_M_contig630.17160.1 vs. uniprot
Match: A0A6H5KX53_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX53_9PHAE)

HSP 1 Score: 389 bits (1000), Expect = 2.330e-108
Identity = 275/652 (42.18%), Postives = 343/652 (52.61%), Query Frame = 0
Query:  792 DPTVIARPWDIFLCRYQDAYEEELSLQRLMELGAAFKKPQVGASVAAVPHRPLRATGDHKVGSSTGGGETDLGPGDGRVWRTAAKPGAQRVLGAMSMATLWGHRNK---------DTVISASIHDDAEYFVSE----IASLLMQMNANGREVGITYWESPERKCLNDSRLPLPAEEEVFLATRSAAAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQLMAKQQMAKQEAR---IAWNDAPGGWKEHSHCHSGPVIIWRAGPTRSRAKAKGDFVEHCCAALVSTAHVPPGVELMLVDGFLQGTGVLETSTAFRPYRRRAWSPLAVPKGGSFPGKSTEDISKLPP-CTVRLHWRKIIVEVGKVPRKPETLYVCSSRPAAIASAAVSADDWDGSGAPRGLLLGKAEGNGCAAFFSQDEMEIPLGTAPWAALNNKNKNSVNSTIKP---TSWSRRGGXXXTPAKQPGDQHHYY-------------------QGPRLHFQACIVCQRFGENGSGSSSASGGGDNGENLNQNGSDSNGSTSRPSVRGP---GPLLFCSTCPASFHLPCLRPRLRVMPKGAWTESSNGGXXXXXXXXXXWSCAYCYATGRAIGGDSDGACGAVRLMESLRQGMQNAVRVNTKRTLRYKAFG 1401
            D  ++ARP D+F+  +++ YEE +SL RL +LGA+F   +  A + A P             S+   G  + GPG GR +   AKPGAQ++L AMSM++LW H+ +         +TV+SASIHDDAE  V E    +  LL  M   GRE+G+++WESPERKCLN+  LPLP      LA   AA  XXXXXXXXXXXXXXXX                       KQ + KQ A      W   PGGW E  HCH  P+++W  GP+R+R +AKG+F++HC AA++ ++H P G ELMLVDGFL GTGVLE    F+ YRRR W  L+        G +     KLPP  T RL W+K  ++VGKVPR  +++YVCSSR    A    SA+     G+  G                QD     +GTAPW A  + + N    T  P   T+ +        P                              QGP  HF+ACIVCQR G + +G +                 D     S    RGP   GPLL CSTCPA+FHL CLRPRLR MP+G    +S GG          WSCAYC+A GR IGGD+DGACGAVRLMESLRQGM  AVRVN  RTLRY A G
Sbjct: 1200 DRKIVARPTDLFV--FKEGYEENISLARLRQLGASFSFTR--APITAAPFT-----------SAASDGLANQGPGGGRRFEGPAKPGAQQILDAMSMSSLWNHKMRGGVGPSAKGETVVSASIHDDAELMVHEALRQVLLLLKSMKEQGREIGVSFWESPERKCLNECTLPLPPSVLARLADEDAAXXXXXXXXXXXXXXXXXXVTKGKVGC--------------GKQGLQKQHAGGVVPVWPKIPGGWAEPRHCHIAPLVVWATGPSRARVRAKGEFMDHCSAAMLGSSHFPRGAELMLVDGFLHGTGVLEKHAVFQRYRRRPWPQLSPEDAVRLQGPA-----KLPPGATTRLQWKKKFLQVGKVPRSQQSIYVCSSREGLEAVTMTSANTRGNDGSTAGXXXXXXX----XXXVCQDG--AAMGTAPWTAALDSSTNEDRKTSTPEIPTTATAAANATHAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQQGP--HFRACIVCQRPGTDSNGVAV----------------DEPAPPSLLQTRGPAAAGPLLLCSTCPAAFHLSCLRPRLRKMPEG----TSEGGSAK-------WSCAYCHAMGRVIGGDADGACGAVRLMESLRQGMHGAVRVNALRTLRYNALG 1782          
BLAST of mRNA_F-serratus_M_contig630.17160.1 vs. uniprot
Match: A0A7S3YUQ4_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YUQ4_9EUKA)

HSP 1 Score: 60.1 bits (144), Expect = 2.590e-5
Identity = 28/75 (37.33%), Postives = 40/75 (53.33%), Query Frame = 0
Query:  876 KPGAQRVLGAMSMATLWGHRNKDTVISASIHDDAEYFVSEIASLLMQMNANGREVGITYWESPERKCLNDSRLPL 950
            K G   V+ AM  +TLW H   + V    +HD+A   + E+  ++  + A  R   +TYWES E  C N+S LPL
Sbjct:  275 KSGGHWVICAMRFSTLWEHEGPEIVAVVDVHDNASLMLKELHKIVHLLGAQKRTHALTYWESDEPVCANNSSLPL 349          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig630.17160.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LS03_ECTSI4.150e-11140.79PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KX53_9PHAE2.330e-10842.18PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A7S3YUQ4_9EUKA2.590e-537.33Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 1256..1356
e-value: 9.8E-8
score: 41.7
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 1257..1355
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 1300..1333

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig630contigF-serratus_M_contig630:339026..359222 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig630.17160.1mRNA_F-serratus_M_contig630.17160.1Fucus serratus malemRNAF-serratus_M_contig630 338073..365061 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig630.17160.1 ID=prot_F-serratus_M_contig630.17160.1|Name=mRNA_F-serratus_M_contig630.17160.1|organism=Fucus serratus male|type=polypeptide|length=1402bp
MKRAREATDAAPDAVVENAAPAEEKVEEITEKTATWADTAVAVDEADVAV
VAEAAVVATERAVPLEAMEGVEGVEAAVPTNNPADGESRSRWNERKERAE
RRARVTSAARGGGALGSRLTRDRSDGRSESISSADGSAERPRLTSDEEKC
ELAEQARKESGEEIEVIDVGPKFELEMQMQDAPDALLSSTNTADRVNIAG
NGDAGRIKAPQNDDASEAGGGGGRLETRPLEQKPWEVEEEATPPGVVGEV
ETKVESKEIDYASGGTVTALDVTADFDTSRLVSIPTAPVGDGGGSIRTLT
EGGALSSAGVLATSEVEAVSSKGCEDIGSERLQAGSGGEPEVMEVEPDLE
DASRPDLVGLTSGGMVDGEGRQGAGSEMDTIADERLPEGKGGGDRPEKME
EEDIDAGEKSGEKTGADARSKPEAPWGELGENQTVVVTETTVMVASSEEN
ASEKEKKTENDRGGLEMADSKDQTTMVPSGNNAGYVGSSHPSMGPHSLAL
VQSASADEDWMDVLVSSPVSPGDLNSAGAYSCTPSVEGGRPAAEEPPSAG
GGPDDVIGGLQGSEYLLEATGLAVGGAQSPPQGIRLGSQGRGGRRKSRAK
GSANPVEEAKAKAEGGEVEMVPEVTAQATMTGAQASGEAMLTQAGGDAGA
QSSASSLFAIRKSGRRRIETNRFRDAWEGSTVSKQKKIAVVESAECGSTT
SGTAAEPVTTPAPVMATTSVEGGFQSGGSGSEEKPKAAAVGTAIAMKFAK
AAKAAKVTGLVAAKADVAAVSVLTTAEQAPSTTATTTLSSFDPTVIARPW
DIFLCRYQDAYEEELSLQRLMELGAAFKKPQVGASVAAVPHRPLRATGDH
KVGSSTGGGETDLGPGDGRVWRTAAKPGAQRVLGAMSMATLWGHRNKDTV
ISASIHDDAEYFVSEIASLLMQMNANGREVGITYWESPERKCLNDSRLPL
PAEEEVFLATRSAAAYASACGGGGGSNSGVGGKGKGGGGSKAKSKGSQQQ
RQLMAKQQMAKQEARIAWNDAPGGWKEHSHCHSGPVIIWRAGPTRSRAKA
KGDFVEHCCAALVSTAHVPPGVELMLVDGFLQGTGVLETSTAFRPYRRRA
WSPLAVPKGGSFPGKSTEDISKLPPCTVRLHWRKIIVEVGKVPRKPETLY
VCSSRPAAIASAAVSADDWDGSGAPRGLLLGKAEGNGCAAFFSQDEMEIP
LGTAPWAALNNKNKNSVNSTIKPTSWSRRGGGGGTPAKQPGDQHHYYQGP
RLHFQACIVCQRFGENGSGSSSASGGGDNGENLNQNGSDSNGSTSRPSVR
GPGPLLFCSTCPASFHLPCLRPRLRVMPKGAWTESSNGGPGGSSGGGGGW
SCAYCYATGRAIGGDSDGACGAVRLMESLRQGMQNAVRVNTKRTLRYKAF
G*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD