prot_F-serratus_M_contig625.17096.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig625.17096.1
Unique Nameprot_F-serratus_M_contig625.17096.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length175
Homology
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BLAST of mRNA_F-serratus_M_contig625.17096.1 vs. uniprot
Match: D7FPD0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPD0_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 3.190e-41
Identity = 79/178 (44.38%), Postives = 112/178 (62.92%), Query Frame = 0 
Query:    1 RRTFWATAGLGWVVWVLSVSSAADQKW--MTSGSFGLGIKDVTKACDSPFANESACEAYDAFVATQTLATVMCSVAVAIYTIAFFRPFEAKIGSTKVLGLMGGVLMAFASFFQMLAFIFAAKRVQKNNEDLGESLF-ENGPTYDVGVTTFVFGSVQAILILLTFKATGDGPLLPILRR 175
            R+ +W   G GWVVWVL+  +A D+ W  + +G  G G+     ACD    N+S C A+  F A Q  ATVMCSVAV ++T++FFRP +A+ GS+K LGL+GGV MA  +F QM++ +F  K +Q+ N   G++   + G TY +G+T FVFG +Q I++L  F    +GPLL   RR
Sbjct:   23 RKVYWFGCGFGWVVWVLTTPAAGDENWGELPAGD-GYGVA-TGFACDEGDVNDSFCTAHRNFAAAQKAATVMCSVAVLLFTVSFFRPSQARYGSSKGLGLVGGVFMALFTFCQMVSILFLVKSIQEYNRYGGDAFMAKTGDTYGLGITAFVFGLIQVIIVLGFFGQAANGPLLSCTRR 198
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BLAST of mRNA_F-serratus_M_contig625.17096.1 vs. uniprot
Match: A0A6H5KLK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLK4_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 5.330e-26
Identity = 58/118 (49.15%), Postives = 77/118 (65.25%), Query Frame = 0 
Query:   60 FVATQTLATVMCSVAVAIYTIAFFRPFEAKIGSTKVLGLMGGVLMAFASFFQMLAFIFAAKRVQKNNEDLGESLFE--NGPTYDVGVTTFVFGSVQAILILLTFKATGDGPLLPILRR 175
            F A Q  ATVMCSVAV ++T++FFRP  A+ GS+K  GL+GGV MA  +FFQM++ +F  K +Q+ N   G   FE   G TY +G+T FVFG +Q I++L  F    +GPLL   RR
Sbjct:    9 FAAAQKAATVMCSVAVLLFTVSFFRPSHARHGSSKGFGLVGGVFMALFTFFQMVSILFLVKSIQEYNR-YGGGAFEAKTGDTYGLGMTAFVFGLIQVIIVLGFFGQAANGPLLSCTRR 125
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig625.17096.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPD0_ECTSI3.190e-4144.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLK4_9PHAE5.330e-2649.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 120..138
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 139..161
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 65..83
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..64
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 95..119
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 162..175
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 84..94
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.752
NoneNo IPR availableTMHMMTMhelixcoord: 95..117
NoneNo IPR availableTMHMMTMhelixcoord: 5..23
NoneNo IPR availableTMHMMTMhelixcoord: 137..159
NoneNo IPR availableTMHMMTMhelixcoord: 60..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig625contigF-serratus_M_contig625:429415..430637 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig625.17096.1mRNA_F-serratus_M_contig625.17096.1Fucus serratus malemRNAF-serratus_M_contig625 429415..430637 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig625.17096.1 ID=prot_F-serratus_M_contig625.17096.1|Name=mRNA_F-serratus_M_contig625.17096.1|organism=Fucus serratus male|type=polypeptide|length=175bp
RRTFWATAGLGWVVWVLSVSSAADQKWMTSGSFGLGIKDVTKACDSPFAN
ESACEAYDAFVATQTLATVMCSVAVAIYTIAFFRPFEAKIGSTKVLGLMG
GVLMAFASFFQMLAFIFAAKRVQKNNEDLGESLFENGPTYDVGVTTFVFG
SVQAILILLTFKATGDGPLLPILRR
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