prot_F-serratus_M_contig6240.17092.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6240.17092.1
Unique Nameprot_F-serratus_M_contig6240.17092.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length124
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig6240.17092.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 1.680e-69
Identity = 109/121 (90.08%), Postives = 117/121 (96.69%), Query Frame = 0 
Query:    1 MAGKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKVGKYSKRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVSK 121
            M+GKGKGGRGKK+T+RS+KAGLQFPVGR+GRFLK GKY+ RVGAG+PVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK  K
Sbjct:    1 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 121
[Close]
BLAST of mRNA_F-serratus_M_contig6240.17092.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 9.920e-69
Identity = 109/121 (90.08%), Postives = 117/121 (96.69%), Query Frame = 0 
Query:    1 MAGKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKVGKYSKRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVSK 121
            M+GKGKGGRGKK+T+RS+KAGLQFPVGR+GRFLK GKY+ RVGAG+PVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK  K
Sbjct:   46 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 166
[Close]
BLAST of mRNA_F-serratus_M_contig6240.17092.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 1.050e-68
Identity = 110/122 (90.16%), Postives = 117/122 (95.90%), Query Frame = 0 
Query:    1 MAGKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKVGKYSKRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVSKG 122
            M+GKGKGGRGKK+TS+SSKAGLQFPV RIGR+LK GKY+ RVGAG+PVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK S G
Sbjct:    1 MSGKGKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSVG 122
[Close]
BLAST of mRNA_F-serratus_M_contig6240.17092.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 5.410e-68
Identity = 110/122 (90.16%), Postives = 117/122 (95.90%), Query Frame = 0 
Query:    1 MAGKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKVGKYSKRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVSKG 122
            M+GKGKGGRGKK+TS+SSKAGLQFPV RIGR+LK GKY+ RVGAG+PVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK S G
Sbjct:   52 MSGKGKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSVG 173
[Close]
BLAST of mRNA_F-serratus_M_contig6240.17092.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 207 bits (527), Expect = 2.960e-67
Identity = 106/118 (89.83%), Postives = 113/118 (95.76%), Query Frame = 0 
Query:    1 MAGKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKVGKYSKRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
            M+GKGKGGRGKK TSRS+KAGLQFPVGRIGRF+K GKYS RVG G+PVY+AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELN+LLG+ TIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRGKKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_F-serratus_M_contig6240.17092.1 vs. uniprot
Match: A0A836CG77_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG77_9STRA)

HSP 1 Score: 202 bits (515), Expect = 2.760e-65
Identity = 106/123 (86.18%), Postives = 116/123 (94.31%), Query Frame = 0 
Query:    1 MAGKGKGGRG---KKATSRSSKAGLQFPVGRIGRFLKVGKYSKRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVS 120
            MAGKGKGGRG   KK+TS+SSKAGLQFPV R+GRFLKVG+Y++RVGAG+PVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKK +
Sbjct:    1 MAGKGKGGRGAEAKKSTSKSSKAGLQFPVARLGRFLKVGRYAERVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHAVLLPKKTA 123
[Close]
BLAST of mRNA_F-serratus_M_contig6240.17092.1 vs. uniprot
Match: H2A_CHLRE (Histone H2A n=45 Tax=Chlamydomonadales TaxID=3042 RepID=H2A_CHLRE)

HSP 1 Score: 196 bits (498), Expect = 1.080e-62
Identity = 104/123 (84.55%), Postives = 112/123 (91.06%), Query Frame = 0 
Query:    1 MAGKGKGGR-GKKATSRSSKAGLQFPVGRIGRFLKVGKYSKRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVSKG 122
            MAG+GKG   GKKA SRS+KAGLQFPVGRI R+LK GKY++R+GAG+PVYLAAVLEYLTAEVLELAGNAARDNKK RIVPRHIQLA+RNDEEL KLLGEVTIASGGVLPNIHAVLLPKK   G
Sbjct:    1 MAGRGKGKTSGKKAVSRSAKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKNRIVPRHIQLAIRNDEELGKLLGEVTIASGGVLPNIHAVLLPKKTKGG 123
[Close]
BLAST of mRNA_F-serratus_M_contig6240.17092.1 vs. uniprot
Match: C1EAM9_MICCC (Histone H2A n=7 Tax=cellular organisms TaxID=131567 RepID=C1EAM9_MICCC)

HSP 1 Score: 196 bits (497), Expect = 1.220e-62
Identity = 101/121 (83.47%), Postives = 111/121 (91.74%), Query Frame = 0 
Query:    1 MAGKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKVGKYSKRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVSK 121
            M+G+GKG  GKKA SRS+KAGLQFPVGRI R+LKVGKY+ RVGAG+PVYLAAVLEYL AEVLELAGNA+RDNKK RIVPRHIQLA+RNDEEL+KLLG VTIASGGVLPNIH+VLLPKK  K
Sbjct:    1 MSGRGKGKSGKKAVSRSAKAGLQFPVGRIARYLKVGKYATRVGAGAPVYLAAVLEYLAAEVLELAGNASRDNKKTRIVPRHIQLAIRNDEELSKLLGTVTIASGGVLPNIHSVLLPKKSKK 121
[Close]
BLAST of mRNA_F-serratus_M_contig6240.17092.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 196 bits (498), Expect = 1.540e-62
Identity = 100/117 (85.47%), Postives = 113/117 (96.58%), Query Frame = 0 
Query:    3 GKGKGGRG-KKATSRSSKAGLQFPVGRIGRFLKVGKYSKRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
            GKGKGGRG KKA S+S+KAGLQFPVGR+GRFLK G+Y+KRVGAG+PVY+AAV+EYL AEVLEL+GNAARDNKK+RI+PRHIQLAVRNDEELNKLLG+VTIA+GGVLPNIHAVLLPKK
Sbjct:    5 GKGKGGRGDKKAVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKK 121
[Close]
BLAST of mRNA_F-serratus_M_contig6240.17092.1 vs. uniprot
Match: B9H1Y2_POPTR (Histone H2A n=5 Tax=Saliceae TaxID=238069 RepID=B9H1Y2_POPTR)

HSP 1 Score: 195 bits (495), Expect = 3.190e-62
Identity = 103/125 (82.40%), Postives = 113/125 (90.40%), Query Frame = 0 
Query:    1 MAGKGKG---GRGKKATSRSSKAGLQFPVGRIGRFLKVGKYSKRVGAGSPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVSKG 122
            MAG+GK    G  KKATSRSSKAGLQFPVGRI RFLK GKY++RVGAG+PVYL+AVLEYL AEVLELAGNAARDNKK RIVPRHIQLAVRNDEEL++LLG+VTIA+GGVLPNIH  LLPK+VSKG
Sbjct:    1 MAGRGKALGSGAAKKATSRSSKAGLQFPVGRIARFLKTGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGQVTIANGGVLPNIHNTLLPKRVSKG 125
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6240.17092.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI9_ECTSI1.680e-6990.08Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D7G193_ECTSI9.920e-6990.08Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KG79_9PHAE1.050e-6890.16Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FVQ5_ECTSI5.410e-6890.16Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D8LLP0_ECTSI2.960e-6789.83Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A836CG77_9STRA2.760e-6586.18Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
H2A_CHLRE1.080e-6284.55Histone H2A n=45 Tax=Chlamydomonadales TaxID=3042 ... [more]
C1EAM9_MICCC1.220e-6283.47Histone H2A n=7 Tax=cellular organisms TaxID=13156... [more]
A0A835ZLE9_9STRA1.540e-6285.47Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
B9H1Y2_POPTR3.190e-6282.40Histone H2A n=5 Tax=Saliceae TaxID=238069 RepID=B9... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 12..34
score: 72.8
coord: 41..56
score: 84.58
coord: 70..84
score: 74.98
coord: 56..69
score: 90.54
coord: 98..116
score: 76.04
IPR002119Histone H2ASMARTSM00414h2a4coord: 3..121
e-value: 3.0E-77
score: 272.6
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 90..122
e-value: 3.9E-19
score: 68.1
IPR009072Histone-foldGENE3D1.10.20.10coord: 2..122
e-value: 2.3E-60
score: 203.9
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 3..121
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 11..87
e-value: 1.8E-14
score: 54.2
NoneNo IPR availablePANTHERPTHR23430:SF233HISTONE H2A.6-RELATEDcoord: 1..120
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 1..120
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 20..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6240contigF-serratus_M_contig6240:15658..16029 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6240.17092.1mRNA_F-serratus_M_contig6240.17092.1Fucus serratus malemRNAF-serratus_M_contig6240 15658..16029 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6240.17092.1 ID=prot_F-serratus_M_contig6240.17092.1|Name=mRNA_F-serratus_M_contig6240.17092.1|organism=Fucus serratus male|type=polypeptide|length=124bp
MAGKGKGGRGKKATSRSSKAGLQFPVGRIGRFLKVGKYSKRVGAGSPVYL
AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVT
IASGGVLPNIHAVLLPKKVSKGT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR032454Histone_H2A_C
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3
IPR032458Histone_H2A_CS