prot_F-serratus_M_contig624.17081.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig624.17081.1
Unique Nameprot_F-serratus_M_contig624.17081.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length347
Homology
BLAST of mRNA_F-serratus_M_contig624.17081.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL)

HSP 1 Score: 225 bits (574), Expect = 6.260e-66
Identity = 132/371 (35.58%), Postives = 193/371 (52.02%), Query Frame = 0
Query:    7 QWRGALKREMDVQIARGVWKVVDRPKGKTVLGTKTVFKQKVGQDGRVEKYKCRFVA--------------------------------KVGLGGQQLDVDMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKA-PLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 344
            QW  A+K E D     G W  V R     V+ TK VF +K  + G + ++K R VA                                  G   +QLDVD AFL AD+ E++Y+E P+G +   ++V +L KA+YGL  AG  W K   G LI  GF+   +D C++  +  G     I +YVDD++V   T+       + + + F IK+LG + + LG  I  DR  R ++ +Q  Y +T+ ERF  +    +  P  ++  LS+ADGP++D + AEM   PYR  +G L +VA  TRPD+A+    L++F +NPGP HW A ++ L+YLK T   G++YGG  E+     + DAD  +  D RRSVSG
Sbjct:    8 QWLKAVKAEFDAHSRNGTWTKVKRQTWMKVIKTKWVFAKKFNEHGDILRWKARLVALGFLQLFGVDFFETYAAVASMGSIRIFLSVCCAAGYILEQLDVDTAFLNADLKEDVYIEPPEGLKVDGDRVLKLNKALYGLKQAGNAWFKTIHGALIDLGFKPCGSDTCIYVGR-AGGDTTYICLYVDDMVVGGRTQTRVDEVKKLIAARFRIKELGPVKHLLGMEIVYDRVKRYLSINQAHYVKTLVERFNQQSCRDVTNPCEQSLKLSKADGPRDDQQKAEMSKRPYRSLIGCLQYVAQCTRPDIAFAVTHLSRFMENPGPRHWTAAIRVLRYLKSTRDYGISYGGDHEENTPVVFCDADWGTSVDDRRSVSG 377          
BLAST of mRNA_F-serratus_M_contig624.17081.1 vs. uniprot
Match: H3H7M7_PHYRM (CCHC-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7M7_PHYRM)

HSP 1 Score: 233 bits (595), Expect = 2.380e-65
Identity = 134/346 (38.73%), Postives = 189/346 (54.62%), Query Frame = 0
Query:    7 QWRGALKREMDVQIARGVWKVVDRPKGKTVLGTKTVFKQKVGQDGRVEKYKCRFVAK------VGLGGQQLDVDMAFLEADVTEELYVELPDGYRDSPNQVGR--LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKAPLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 344
            +W  A++ EM        WK+VD P  K  +G K VF+ K    G++ K+K R VAK        +  + +DVD AFL  DV EELY++ PDG+ D  N   +  L +A+YG   A   W+ K    L  +GF RS ADPCV+ R+   K  +IIV YVDDL++ S TK +     + L+  F IK+LGE+ Y LG  I R+R  +T+  +Q+ Y Q + E FG+ K   +  P      S+   P  D +    +  PYRE VGALM++A  TRPD+A     +AKF +     HW A  + L+YLK T  LG+ + G T+  +L  + DA+ A   DTRRS +G
Sbjct:  705 EWLRAMESEMKSLEDHRTWKLVDMPSDKKAIGCKWVFRIKRDPSGKIIKFKARLVAKGFTQPEEDMEAENVDVDTAFLYGDVEEELYMDQPDGFEDQVNPTKKCLLMQALYGTKQAARQWNSKLNKHLEGQGFHRSAADPCVYVRRSDSKFSIIIV-YVDDLMIFSRTKAEIGEIKKALKREFSIKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEEFGVEKCKAVHTPADSN--SKLVKPSEDEDFVPRY--PYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTPDLGLVFNGGTKG-ELIGYADANWAGDLDTRRSTTG 1044          
BLAST of mRNA_F-serratus_M_contig624.17081.1 vs. uniprot
Match: A0A2P6Q6P3_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6Q6P3_ROSCH)

HSP 1 Score: 221 bits (562), Expect = 3.150e-64
Identity = 128/367 (34.88%), Postives = 198/367 (53.95%), Query Frame = 0
Query:   12 LKREMDVQIARGVWKVVDRPKGKTVLGTKTVFKQKVGQDGRVEKYKCRFVAK--------------------------------VGLGGQQLDVDMAFLEADVTEELYVELPDGYRDSPNQ--VGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKA-PLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVS 343
            +K EM+  +    +++V+ PKG+  L  K VFK K  ++ ++ K+K R V K                                + L  +QLDV  AFL  D+ EE+Y+E P+G+     Q  V +L+K++YGL  A   W KKF   ++  G++R+ ADPCV+ ++  G   +I+++YVDD+L++ +      +   DL  SF +KDLG     LG  ITRDR+A+ +   Q+RY + V ERF +++   +  P G    LSR   P    E  +M GIPY  AVG+LM+    TRPD+A+    ++++  NPG EHW+AV   L+YL+ T+ L + +GG+  +  L  + DAD A   D R+S S
Sbjct:    1 MKSEMESLLKNDTYELVELPKGRKALKNKWVFKLKRDENEQLTKFKARLVVKGFGQKEGIDFDEIFSPVVKMTSIRIILGMAASMDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVERKQHMVCKLKKSLYGLKQAPRQWYKKFDSFMVGHGYKRTDADPCVYLQRFTGGNFIILLLYVDDMLIVGKDVSMIRKLKADLSKSFDMKDLGPAKQILGMEITRDRQAKKLWLSQERYVERVLERFNMKEAKSVSSPLGNHFKLSRLSCPTTQVEKDKMAGIPYSSAVGSLMYAMVCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILKYLRGTSKLCLCFGGS--EPILEGFTDADLAGDLDNRKSTS 365          
BLAST of mRNA_F-serratus_M_contig624.17081.1 vs. uniprot
Match: A0A2P6SP23_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6SP23_ROSCH)

HSP 1 Score: 228 bits (580), Expect = 3.220e-63
Identity = 131/372 (35.22%), Postives = 202/372 (54.30%), Query Frame = 0
Query:    7 QWRGALKREMDVQIARGVWKVVDRPKGKTVLGTKTVFKQKVGQDGRVEKYKCRFVAK--------------------------------VGLGGQQLDVDMAFLEADVTEELYVELPDGYRDSPNQ--VGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKA-PLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVS 343
            +W  A+K EM+  +    +++V+ PKG+  L  K VFK K  ++ ++ K+K R V K                                + L  +QLDV  AFL  D+ EE+Y+E P+G+     Q  V +L+K++YGL  A   W KKF   ++  G++R+ ADPCV+ ++  G   +I+++YVDD+L++ +     H+   DL  SF +KDLG     LG  ITRDR+A+ +   Q+RY + V ERF +++   +  P G    LSR   P    E  +M GIPY  AVG+LM+    TRPD+A+    ++++  NPG EHW+AV   L+YL+ T+ L + +GG+  +  L  + DAD A   D R+S S
Sbjct:  835 KWMLAMKSEMESLLKNDTYELVELPKGRKALKNKWVFKLKRDENEQLTKFKARLVVKGFGQKEGIDFDEIFSPVVKMTSIRIILGMAASMDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVEGKQHMVCKLKKSLYGLKQAPRQWYKKFDSFMVGHGYKRTDADPCVYLQRFTGGNFIILLLYVDDMLIVGKDVSMIHKLKADLSKSFDMKDLGPAKQILGMEITRDRQAKKLWLSQERYVERVLERFNMKEAKSVSSPLGNHFKLSRLSCPTTQVEKDKMAGIPYSSAVGSLMYAMVCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILKYLRGTSKLCLCFGGS--EPILEGFTDADLAGDLDNRKSTS 1204          
BLAST of mRNA_F-serratus_M_contig624.17081.1 vs. uniprot
Match: A0A0A9Z683_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z683_LYGHE)

HSP 1 Score: 220 bits (561), Expect = 1.130e-60
Identity = 125/370 (33.78%), Postives = 197/370 (53.24%), Query Frame = 0
Query:    8 WRGALKREMDVQIARGVWKVVDRPKGKTVLGTKTVFKQKVGQDGRVEKYKCRFV--------------------------------AKVGLGGQQLDVDMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTG-KAPLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 344
            W+ A+  E   Q+  G W++VD P GK  L +K VF+ K    G++ K+K R V                                AK  +   Q+D   AFL+ D+TEE+Y+  P+GY++S  +V RL+K++YGL  A  +W+ K    L   G  +S+ DPC++  K   K +V + V+VDDLL+ S+ K+        L   F + D+GE  + LG  I+RDR+ + +  DQ+ Y   V  RFG+   +    P      LS+   P +  E  +M  IPY+EAVG+L++ + + RPD+A+    +++F  NPGP HW AV + L+Y+K T+   + Y G T+  +++ + D+D AS  D R+SV+G
Sbjct:  855 WKQAMDVEYKSQLENGTWELVDLPPGKVPLNSKWVFRTKRDVTGKIVKHKARLVVKGCAQRKGLDFEETFSPVVRYSSIRYLLALAAKRDMDIHQMDAVSAFLQGDLTEEIYMRQPEGYQES-GKVCRLRKSLYGLKQASRVWNIKLDRSLKTIGLRQSKFDPCIYY-KSSQKKMVFVAVWVDDLLIFSDDKKLTQEVKSQLMKCFKMTDIGEAKFVLGFQISRDRERKKIWMDQRAYIDNVLIRFGMENCNPAATPLDPNIKLSKDQQPSSPDERKKMEAIPYQEAVGSLLFASQVCRPDIAFAVSLVSRFNSNPGPAHWAAVKRILRYMKGTSDWKLEYDG-TKSSEITGYCDSDFASDVDERKSVTG 1221          
BLAST of mRNA_F-serratus_M_contig624.17081.1 vs. uniprot
Match: A0A4Y9ZBF0_9AGAM (Uncharacterized protein n=1 Tax=Dentipellis fragilis TaxID=205917 RepID=A0A4Y9ZBF0_9AGAM)

HSP 1 Score: 220 bits (560), Expect = 1.660e-60
Identity = 133/373 (35.66%), Postives = 194/373 (52.01%), Query Frame = 0
Query:    7 QWRGALKREMDVQIARGVWKVVDRPKGKTVLGTKTVFKQKVGQDGRVEKYKCRFV--------------------------AKVGLGG------QQLDVDMAFLEADVTEELYVELPDGYRDS-PNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKAP-LSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKL-SAWVDADHASCPDTRRSVSG 344
            +W  A   E+   +  G +++V  P  +T LG++ VFK K   DG +E++K R V                          A + L        + +D+  AFL  D+ EE+YV  P+G+ +  P  V RL K++YGL  AG  W KK    L A GF R + +  ++  +    V +II V++DD+ + S+++    +  +DLR+ F  +DLG  S+ LG  ITRDR  RT++  Q++Y   + ERFG+ +   +  P      L+ A  PK   E AEMH  PYR AVGAL ++A  TR D+A++   LA+FG NPG EHWKA+   L+YLK T    +TY        L +A+ DADH    D  RS SG
Sbjct:  683 KWYSAAVEEVQALVENGTFQLVRLPPDRTALGSRWVFKVKHKSDGSIERHKARLVVQGFSQRPGFDYTETFAPTPRWSALRAVLALAAIEDLELESIDISSAFLNGDLEEEIYVRQPEGFTEKGPEWVWRLLKSLYGLKQAGRCWHKKLNEVLEALGFHRIKCEHSIWVYQR-DDVRIIIPVFIDDMTIASKSQAAIQKVKDDLRAHFKFRDLGPTSWLLGVEITRDRSTRTLSLSQRQYTLDLLERFGMSQCDTVATPLNPGTRLTSAMSPKTQEESAEMHDKPYRAAVGALQYLATATRCDIAHSVGVLARFGHNPGIEHWKALKHLLRYLKGTLDYKLTYHPDPSGSHLFTAFCDADHGGDLDNGRSTSG 1054          
BLAST of mRNA_F-serratus_M_contig624.17081.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 219 bits (557), Expect = 3.910e-60
Identity = 125/376 (33.24%), Postives = 199/376 (52.93%), Query Frame = 0
Query:    2 SSEWPQWRGALKREMDVQIARGVWKVVDRPKGKTVLGTKTVFKQKVGQDGRVEKYKCRFVAK--------------------------VGLGG------QQLDVDMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKAPLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSA-WVDADHASCPDTRRSVSG 344
            S EW +W+ A+  EM V    G +   D P G+  +G K VF +K  +DG + +YK R VA+                          +G+         Q+DV  A+L  ++ EE+Y+  P+GY D   +V RL+K +YGL  +G  W+++F  +L + GF + +AD CV++R   G++  II V+VDDLL+ SET +D      +L + F +KDLGE    +G  I RDR+  T++  Q++Y + V  RFG++    +  P     + +       A+ A + G  Y+  +G+L++ A  TRPD+++    L +F  NPGPEHW A+ +  +YL  T +L + +    E   +S  + DA  AS PD R+S+SG
Sbjct:  888 SPEWAEWKKAMDEEMSVIKEMGTYTKEDLPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMT-IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTPLDPNVILKKRTDDLVADPAMVGG--YQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHWTALKRVCRYLAGTRNLELVFRANEEGEIISTGYSDASFASNPDDRKSISG 1260          
BLAST of mRNA_F-serratus_M_contig624.17081.1 vs. uniprot
Match: H3G9E3_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G9E3_PHYRM)

HSP 1 Score: 209 bits (533), Expect = 5.080e-60
Identity = 127/367 (34.60%), Postives = 187/367 (50.95%), Query Frame = 0
Query:   12 LKREMDVQIARGVWKVVDRPKGKTVLGTKTVFKQKVGQDGRVEKYKCRFVAK--------------------------------VGLGGQQLDVDMAFLEADVTEELYVELPDGYRDSPNQVGR--LQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKAPLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 344
            +K EM        W++V  P+ K  +G K VF+ K   +G V K+K R VAK                                  +  + +DVD AFL  DV EELY++ PDG+ D  N   +  L++A+YG   A   W+ K    L  +GF RS ADPCV+ R+   +   I+V+YVDDL++ S+TK+        L+  F IK+LGE+ Y LG  I R+R+ +T+  +Q+ Y + + E+FG+ K   +  P        +   K   E A +   PYRE VGALM++A  TRPD+A     +AKF +     HW A  + L+YLK T  +G+ + GA +   +  + DA+ A   DTRRS +G
Sbjct:    1 MKSEMKSLEDHNTWELVKMPRDKKAIGFKWVFRIKRDPNGNVVKFKARLVAKGYTQRPGIDFTDTFAPVAREESINASLATAAEEDMEAENVDVDTAFLYGDVEEELYMDQPDGFEDQSNPAMKCLLKQALYGTKQAARQWNSKLNKHLEDQGFRRSDADPCVYVRRSTDEYS-IVVIYVDDLMLFSKTKEHIESIKVALKKEFSIKELGELKYCLGIEIDRNREDKTILMNQRAYIKRLAEKFGVDKCKAVHTPAD----CNSKLVKMTEEEAFVAKYPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDMGIVFNGAIKGEPIG-YADANWAGDLDTRRSTTG 361          
BLAST of mRNA_F-serratus_M_contig624.17081.1 vs. uniprot
Match: UPI001F00A048 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F00A048)

HSP 1 Score: 218 bits (554), Expect = 8.460e-60
Identity = 130/372 (34.95%), Postives = 197/372 (52.96%), Query Frame = 0
Query:    7 QWRGALKREMDVQIARGVWKVVDRPKGKTVLGTKTVFKQKVGQDGRVEKYKCRFVAK--------------------------------VGLGGQQLDVDMAFLEADVTEELYVELPDGYRDS-PNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKA-PLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 344
            +W  A++ EM+       +++V+ P+GK  L  K VFK K     +V KYK R V K                                + L  +Q+DV  AFL   + EE+Y+E P+G+  S  N V +L+K++YGL  A   W KKF   + ++G++++ AD CV+ +K      V +++YVDD+L++ +  +  ++  ++L  SF +KDLG     LG  ITRDRK R +   Q++Y + V  RF +     + +P      LS+   P +  EI EM  +PY  AVG+LM+    TRPD+A+    +++F  NPG EHW+AV   L+YLK T  L + YGGA  D  L  + DAD A   D+R+S SG
Sbjct:  660 KWFLAMQDEMESLQKNQTYEIVELPRGKKALKNKWVFKLKKDGSEKVVKYKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGMVASMNLELEQMDVKTAFLHGGLDEEIYMEQPEGFEVSGDNLVCKLKKSLYGLKQAPRQWYKKFDSCMTSQGYKKTSADECVYIQKFSDGNFVALLLYVDDILIVGKDAKKINQLKKELSKSFDMKDLGPAQQILGMQITRDRKNRRLWLSQEKYIERVLARFNMNNAKPVSIPLANHFKLSKRSCPSSKEEIGEMSSVPYSSAVGSLMYAMVCTRPDIAHAVGKVSRFLSNPGKEHWEAVKWILRYLKGTIKLCLCYGGA--DPILEGYTDADMAGDLDSRKSTSG 1029          
BLAST of mRNA_F-serratus_M_contig624.17081.1 vs. uniprot
Match: A0A438HUL4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HUL4_VITVI)

HSP 1 Score: 209 bits (533), Expect = 1.160e-59
Identity = 129/378 (34.13%), Postives = 187/378 (49.47%), Query Frame = 0
Query:    2 SSEWPQWRGALKREMDVQIARGVWKVVDRPKGKTVLGTKTVFKQKVGQDGRVEKYKCRFVAK--------------------------------VGLGGQQLDVDMAFLEADVTEELYVELPDGYR--DSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKAP-LSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 344
            SS   +W  A+K EM      GVW +V+ PKG   +G K +FK K    G + +YK R VAK                                  L   Q+DV  AFL  ++ E +Y+  P+ +   DS   V RL++++YGL  A   W +KF   + + GF+ +  D C++  K  G   +I+V+YVDD+L+ S      H  M  L S F +KDLG  S+ LG  I RDR    +   Q+ Y   V  RFG+   +    P  K    S    PKN+ E  +M   PY  AVG+LM+    TRPD+AY    L ++  NPG +HWK   + ++YL+RT    +TY  ++  +++ A+ D+D A C D+RRS SG
Sbjct:   16 SSNSEKWIKAMKDEMKSMKDNGVWDLVELPKGVKPIGCKWIFKTKRDSKGNIVRYKARLVAKGFTQKEGIDYKETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNGNIDETIYMVQPENFESNDSKQLVCRLKRSIYGLKQASRQWYRKFDQVITSFGFKENTVDQCIYL-KFSGSKFIILVLYVDDILLASSDVGLLHETMRFLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRFGMSNYAPGDTPVAKGDKFSLHQCPKNELEKKDMERFPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKKAKRVMRYLQRTKDYMLTYRRSSH-LEIVAYSDSDFAGCLDSRRSTSG 391          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig624.17081.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8K1CTN1_PYTOL6.260e-6635.58Uncharacterized protein n=2 Tax=Pythium oligandrum... [more]
H3H7M7_PHYRM2.380e-6538.73CCHC-type domain-containing protein n=1 Tax=Phytop... [more]
A0A2P6Q6P3_ROSCH3.150e-6434.88Putative RNA-directed DNA polymerase n=1 Tax=Rosa ... [more]
A0A2P6SP23_ROSCH3.220e-6335.22Putative RNA-directed DNA polymerase n=1 Tax=Rosa ... [more]
A0A0A9Z683_LYGHE1.130e-6033.78Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y9ZBF0_9AGAM1.660e-6035.66Uncharacterized protein n=1 Tax=Dentipellis fragil... [more]
A0A284QR88_ARMOS3.910e-6033.24Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
H3G9E3_PHYRM5.080e-6034.60Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI001F00A0488.460e-6034.95DDE-type integrase/transposase/recombinase n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 70..232
e-value: 1.7E-31
score: 109.7
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 6..282
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 81..315

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig624contigF-serratus_M_contig624:140500..141635 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig624.17081.1mRNA_F-serratus_M_contig624.17081.1Fucus serratus malemRNAF-serratus_M_contig624 140473..141635 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig624.17081.1 ID=prot_F-serratus_M_contig624.17081.1|Name=mRNA_F-serratus_M_contig624.17081.1|organism=Fucus serratus male|type=polypeptide|length=347bp
MSSEWPQWRGALKREMDVQIARGVWKVVDRPKGKTVLGTKTVFKQKVGQD
GRVEKYKCRFVAKVGLGGQQLDVDMAFLEADVTEELYVELPDGYRDSPNQ
VGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVV
VIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRD
RKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKAPLSRADGPKNDAEI
AEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMK
ALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2