prot_F-serratus_M_contig6236.17078.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6236.17078.1
Unique Nameprot_F-serratus_M_contig6236.17078.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length251
Homology
BLAST of mRNA_F-serratus_M_contig6236.17078.1 vs. uniprot
Match: D8LKY5_ECTSI (PRA1 family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKY5_ECTSI)

HSP 1 Score: 261 bits (668), Expect = 7.630e-85
Identity = 160/251 (63.75%), Postives = 183/251 (72.91%), Query Frame = 0
Query:    1 MAEGSELKDEIAVLGQHIQKFFIEDCRPWAEFFGPVSQPKWTQAEVKKRVTANMSFFATNYLMICALCSAFYILRSPGLLLTLMVSLSMFLYVFMSRRKPLVVFDMSLGTREKIIAAIAATTLLMSVTGYIFTIQYSTMIGSTLCFLHAVFRPPVARAIRNARNL-EPELHGGDGDVEGGGVWGGTPSAIGRGRVXXXXXXXXXXXXXXPAGVATGMGMSPTLGSGGAGGFHESMPPVGEFGKSRLHSHAT 250
            MAE SELKDE+ VLGQH+ +FF+ D RPWAEFFGPV QPKWTQAEVKKRV AN+SFFATNYLMI A  +A YILRSPGLLLTL+ SL MFLYVFMSRRK LVV D++LGTREK IAA  A+ LL+SVTGYIF++Q+S ++G  +C LHA FRPPVARA+RN R    PELHGGDGD+EGG               XXXXXXXXXXXXXX      G GM+ T        F ES PP+ +   +  HSHAT
Sbjct:    1 MAEASELKDELTVLGQHMHRFFVADRRPWAEFFGPVEQPKWTQAEVKKRVNANLSFFATNYLMIWATIAAVYILRSPGLLLTLLASLCMFLYVFMSRRKKLVVLDVTLGTREKTIAAAVASMLLLSVTGYIFSLQFSGILGCAVCLLHATFRPPVARAVRNTRGGGPPELHGGDGDLEGGXXX------------XXXXXXXXXXXXXXXXXXXXGAGMATTXXXXXXXXFRESAPPMVDPSNAGRHSHAT 239          
BLAST of mRNA_F-serratus_M_contig6236.17078.1 vs. uniprot
Match: A0A836CGC4_9STRA (PRA1 family protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGC4_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.130e-28
Identity = 67/162 (41.36%), Postives = 103/162 (63.58%), Query Frame = 0
Query:   23 IEDCRPWAEFFGPVSQP-KWTQAEVKKRVTANMSFFATNYLMICALCSAFYILRSPGLLLTLMVSLSMFLYVFMSRRKPLVVFDMSLGTREKIIAAIAA--TTLLMSVTGYIFTIQYSTMIGSTLCFLHAVFRPPVARAIRNARNLEPELHGG--DGDVEGG 179
            + + RPWAEF GPV+ P KWT  ++++R+ AN  FF  NY ++ AL SA+YI+ SPGLLLTL+V L ++  V ++RRK  V  + ++   + +   +A   T +L+   GY+F +Q++  +G  +C  HA+ RPPVARA+   R+ E +   G   GD+EGG
Sbjct:   17 LGEVRPWAEFVGPVAPPPKWTLPDIQRRLVANTRFFKANYALLVALMSAYYIVTSPGLLLTLLVCLMLYGAVLLTRRKNYVFMNGAVIVTDTVKMGVATVVTVILLGAMGYLFALQWAVSLGGLVCLAHALLRPPVARALLTQRS-EADASAGVRGGDIEGG 177          
BLAST of mRNA_F-serratus_M_contig6236.17078.1 vs. uniprot
Match: A0A3P6D904_BRAOL (PRA1 family protein (Fragment) n=2 Tax=Brassica TaxID=3705 RepID=A0A3P6D904_BRAOL)

HSP 1 Score: 58.5 bits (140), Expect = 5.560e-7
Identity = 39/113 (34.51%), Postives = 60/113 (53.10%), Query Frame = 0
Query:   44 AEVKKRVTANMSFFATNYLMICALCSAFYILRSPGLLLTLMVSLS--MFLYVFMSRRKPLVVFDMSLGTREKIIAAIAATTLLMSVTGYIFTIQYSTMIGSTLCFLHAVFRPP 154
            A+   R+  N+S+F  NY  I +L  AF +L  P  LL L+  L+  MFLY+F S  +PLVVF  S   RE ++  +  T +++ +T     +  +  +G  +  LH  FR P
Sbjct:   29 ADSFSRIRKNLSYFKVNYSAIISLVLAFSLLSHPFSLLVLLSLLAAWMFLYLFRSSDRPLVVFGRSFSDRETLLGLVLTTVVVVFMTSVGSLLTSALTVGVAIVCLHGTFRVP 141          
BLAST of mRNA_F-serratus_M_contig6236.17078.1 vs. uniprot
Match: UPI0006AB1D99 (PRA1 family protein B2-like n=2 Tax=Brassica napus TaxID=3708 RepID=UPI0006AB1D99)

HSP 1 Score: 55.8 bits (133), Expect = 4.700e-6
Identity = 37/108 (34.26%), Postives = 57/108 (52.78%), Query Frame = 0
Query:   49 RVTANMSFFATNYLMICALCSAFYILRSPGLLLTLMVSLS--MFLYVFMSRRKPLVVFDMSLGTREKIIAAIAATTLLMSVTGYIFTIQYSTMIGSTLCFLHAVFRPP 154
            R+  N+S+F  NY  I +   AF +L  P  LL L+  L+  +FLY+F S  +PLVVF  S   RE ++  +  T +++ +T     +  +  IG  +  LH  FR P
Sbjct:   29 RIRKNLSYFKVNYSAIISFVLAFSLLSHPFSLLVLLSLLAAWIFLYLFRSSDRPLVVFGRSFSDRETLLGLVVTTVVVVFMTSVGSLLTSALTIGVAIVCLHGTFRVP 136          
BLAST of mRNA_F-serratus_M_contig6236.17078.1 vs. uniprot
Match: A0A3S3MFL0_9MAGN (PRA1 family protein n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3MFL0_9MAGN)

HSP 1 Score: 55.5 bits (132), Expect = 1.130e-5
Identity = 41/132 (31.06%), Postives = 66/132 (50.00%), Query Frame = 0
Query:   27 RPWAEFF--GPVSQPKWTQAEVKKRVTANMSFFATNYLMICALCSAFYILRSPGLLLTLMVSLS--MFLYVFMSRRKPLVVFDMSLGTREKIIAAIAATTLLMSVTGYIFTIQYSTMIGSTLCFLHAVFRPP 154
            RPW E       S+P  + ++   R+  N S+F  NYL++ A   A  +L  P  LL L++ LS  +FLY+F     PLV+F  +   RE + + +  T +++ +T     I  + M+G  +   H  FR P
Sbjct:   53 RPWLELLDRSSFSRPD-SLSDAAARIRKNASYFRVNYLLLLASVLALSLLSHPFSLLLLLLLLSAWLFLYLFRPSEPPLVLFGRTFSDREILASLVVLTVVVVFLTSVGSLIISALMVGLAIVAAHGAFRMP 183          
BLAST of mRNA_F-serratus_M_contig6236.17078.1 vs. uniprot
Match: A0A166C3A1_DAUCS (Uncharacterized protein n=3 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166C3A1_DAUCS)

HSP 1 Score: 55.1 bits (131), Expect = 3.080e-5
Identity = 34/126 (26.98%), Postives = 64/126 (50.79%), Query Frame = 0
Query:   27 RPWAEFFGPVSQPKWTQAEVKKRVTANMSFFATNYLMICALCSAFYILRSPGLLLTLMVSLSMFLYVFMSRRKPLVVFDMSLGTREKIIAAIAATTLLMSVTGYIFTIQYSTMIGSTLCFLHAVFR 152
            R W +   P + P  +  EV  R++ N S+F  NY +I  L     +L  PG L+ L+  +S++L++++ R +P+VV+   +     +I     T L++ +T   + +     IG  L  +H++ R
Sbjct:  161 RAWHQVLIPPTMPD-SFNEVLSRISTNFSYFYINYAIIAVLVLFLSLLWHPGTLIVLVFMVSVWLFLYILRERPMVVYGQEIDDLVVLIGLCGVTILMLILTHATYNLAVGVGIGLLLVLIHSILR 285          
BLAST of mRNA_F-serratus_M_contig6236.17078.1 vs. uniprot
Match: A0A5K1DH51_9MAGN (PRA1 family protein n=1 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1DH51_9MAGN)

HSP 1 Score: 53.1 bits (126), Expect = 6.470e-5
Identity = 37/134 (27.61%), Postives = 70/134 (52.24%), Query Frame = 0
Query:   23 IEDCRPWAEFF--GPVSQPKWTQAEVKKRVTANMSFFATNYLMICALCSAFYILRSPGLLLTLMVSLSMFLYVFMSRRKPLVVFDMSLGTREKIIAAIAATTLLMSVTGYIFTIQYSTMIGSTLCFLHAVFRPP 154
            +   RPWAE      +++P+ + AE   R+  N ++F  NY+++ A   A  ++  PG L+ L + LS ++++++ R +PLV+F  +   RE +      T +++ +T     +  + M G  +   HA FR P
Sbjct:   42 LSQRRPWAELADRNQLAKPE-SFAEATGRIRKNWTYFRVNYVILLAAVLAISLVAHPGSLIILAMLLSGWIFLYLFRSEPLVLFGRTYTDREVLGGMTLFTVIVLFLTSVGSLLISALMFGVAIICAHASFRVP 174          
BLAST of mRNA_F-serratus_M_contig6236.17078.1 vs. uniprot
Match: UPI00129E083E (PRA1 family protein B4 n=1 Tax=Nymphaea colorata TaxID=210225 RepID=UPI00129E083E)

HSP 1 Score: 52.8 bits (125), Expect = 8.910e-5
Identity = 38/134 (28.36%), Postives = 68/134 (50.75%), Query Frame = 0
Query:   23 IEDCRPWAEFF--GPVSQPKWTQAEVKKRVTANMSFFATNYLMICALCSAFYILRSPGLLLTLMVSLSMFLYVFMSRRKPLVVFDMSLGTREKIIAAIAATTLLMSVTGYIFTIQYSTMIGSTLCFLHAVFRPP 154
            +   RPW E      +++P  + AE   RV  N ++F  NYL++ +      ++  P  L  L++ LS +L++++ R +PLV+F+ +   RE +   I  T +++ +T     I  + M G  +   HA FR P
Sbjct:   40 LSQRRPWLELVDRNQLAKPD-SLAEATARVRKNWTYFRVNYLILLSTVLTISLVSHPVSLFVLILLLSGWLFLYLFRSEPLVLFNRTFSDREVLGIMILLTIIVVFLTSVGSLIISALMFGLAIVCAHAAFRVP 172          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6236.17078.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LKY5_ECTSI7.630e-8563.75PRA1 family protein n=1 Tax=Ectocarpus siliculosus... [more]
A0A836CGC4_9STRA1.130e-2841.36PRA1 family protein-domain-containing protein n=1 ... [more]
A0A3P6D904_BRAOL5.560e-734.51PRA1 family protein (Fragment) n=2 Tax=Brassica Ta... [more]
UPI0006AB1D994.700e-634.26PRA1 family protein B2-like n=2 Tax=Brassica napus... [more]
A0A3S3MFL0_9MAGN1.130e-531.06PRA1 family protein n=1 Tax=Cinnamomum micranthum ... [more]
A0A166C3A1_DAUCS3.080e-526.98Uncharacterized protein n=3 Tax=Daucus carota subs... [more]
A0A5K1DH51_9MAGN6.470e-527.61PRA1 family protein n=1 Tax=Nymphaea colorata TaxI... [more]
UPI00129E083E8.910e-528.36PRA1 family protein B4 n=1 Tax=Nymphaea colorata T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004895Prenylated rab acceptor PRA1PFAMPF03208PRA1coord: 25..154
e-value: 1.7E-25
score: 89.3
IPR004895Prenylated rab acceptor PRA1PANTHERPTHR19317PRENYLATED RAB ACCEPTOR 1-RELATEDcoord: 24..154
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 73..77
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 133..250
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..94
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..72
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 95..113
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..132
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..49
NoneNo IPR availableTMHMMTMhelixcoord: 56..73
NoneNo IPR availableTMHMMTMhelixcoord: 114..136
NoneNo IPR availableTMHMMTMhelixcoord: 77..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6236contigF-serratus_M_contig6236:14036..22737 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6236.17078.1mRNA_F-serratus_M_contig6236.17078.1Fucus serratus malemRNAF-serratus_M_contig6236 13497..22980 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6236.17078.1 ID=prot_F-serratus_M_contig6236.17078.1|Name=mRNA_F-serratus_M_contig6236.17078.1|organism=Fucus serratus male|type=polypeptide|length=251bp
MAEGSELKDEIAVLGQHIQKFFIEDCRPWAEFFGPVSQPKWTQAEVKKRV
TANMSFFATNYLMICALCSAFYILRSPGLLLTLMVSLSMFLYVFMSRRKP
LVVFDMSLGTREKIIAAIAATTLLMSVTGYIFTIQYSTMIGSTLCFLHAV
FRPPVARAIRNARNLEPELHGGDGDVEGGGVWGGTPSAIGRGRVNANVNA
NIRLRTRPPAGVATGMGMSPTLGSGGAGGFHESMPPVGEFGKSRLHSHAT
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004895Prenylated_rab_accept_PRA1