prot_F-serratus_M_contig6235.17077.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6235.17077.1
Unique Nameprot_F-serratus_M_contig6235.17077.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length129
Homology
BLAST of mRNA_F-serratus_M_contig6235.17077.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 1.740e-22
Identity = 57/121 (47.11%), Postives = 72/121 (59.50%), Query Frame = 0
Query:    1 GPSNITGCRFDGNNATDGGAIYTAAGYDRVVNSSFTRNFAGIIASTVKHLETVQGGALLHSGVLVALTGCTFEFNMAGEDGLAVMSLGIADNISDLSFRNNSFFCPSGKYGFTEDSELVEV 121
            G  N T C F GN+A DGGA+Y+AAGYD + +  F  N A              GGA LHSGVLV L   TF  N A + GLAV SLGIA NI+D +F +N+++C SG+YG+  +    EV
Sbjct:  449 GSVNATMCVFQGNSAVDGGAMYSAAGYDGIKDCRFEDNLA-----------VGSGGAYLHSGVLVELDRSTFVGNRARDAGLAVQSLGIAGNITDTTFESNTYYCSSGQYGYEYEIGEDEV 558          
BLAST of mRNA_F-serratus_M_contig6235.17077.1 vs. uniprot
Match: D7FPF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF6_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 1.320e-18
Identity = 52/121 (42.98%), Postives = 68/121 (56.20%), Query Frame = 0
Query:    1 GPSNITGCRFDGNNATDGGAIYTAAGYDRVVNSSFTRNFAGIIASTVKHLETVQGGALLHSGVLVALTGCTFEFNMAGEDGLAVMSLGIADNISDLSFRNNSFFCPSGKYGFTEDSELVEV 121
            GP+N T C F+ N+A DGGAIY+AAGYD + +S F  N A               GA LHSG+LV+L   TF  N AG  GLAV SL          F +N+++C SG+YG+   ++  EV
Sbjct:  405 GPANTTTCVFERNSAEDGGAIYSAAGYDIISDSWFEDNIA-----------VGSRGAYLHSGLLVSLADTTFVGNRAGAAGLAVASLXXXXXXXXXXFESNTYYCQSGQYGYDISADEDEV 514          
BLAST of mRNA_F-serratus_M_contig6235.17077.1 vs. uniprot
Match: D7FUB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB6_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 1.240e-16
Identity = 50/132 (37.88%), Postives = 65/132 (49.24%), Query Frame = 0
Query:    1 GPSNITGCRFDGNNATDGGAIYTAAGYDRVVNSSFTRNFAGIIASTVKHLETVQGGALLHSGVLVALTGCTFEFNMAGEDGLAVMSLGIADNISDLSFRNNSFFCPSGKYGFTE---DSELVEVRPCPTRCS 129
            GP N T C F+ N+A DGGA Y+AAGYD V + SF  NFA +            GGALLHSGVLV +                     IA+N +D++F  N+F+C  G+YG      D E+ +       CS
Sbjct:  222 GPVNTTACVFERNSADDGGAFYSAAGYDLVQDCSFQANFAAL-----------SGGALLHSGVLVGVHXXXXXXXXXXXXXXXXXXXXIAENFTDVTFAENTFYCAPGQYGSDAHFLDEEVADTCRLEVVCS 342          
BLAST of mRNA_F-serratus_M_contig6235.17077.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 2.770e-9
Identity = 47/132 (35.61%), Postives = 64/132 (48.48%), Query Frame = 0
Query:    2 PSNITGCRFDGNNA-TDGGAIYTAAGYDRVVNSSFTRNFAGIIASTVKHLETVQGGALLHSGVLVALTGCTFEFNMAGEDG-LAVMSLGIADNISDLSFRNNSFFCPSGKYGFTEDS-ELVEV--RPCPTRC 128
            P+    CRF  N A   GGA+ TAAG D+ VNS F  N AG             GGAL  +G    +  C+F  N++ + G  AV ++G   ++S+LSF  N + C  G +   E+S  L E     CP  C
Sbjct:  370 PTTFEQCRFTSNRAIATGGAVDTAAGQDKFVNSVFEGNTAG------------TGGALRLAGT-AEVNNCSFVENVSDDGGGAAVSNIGFVSSVSNLSFSRNVYGCQEGMFLECEESGTLYEAICDGCPVEC 488          
BLAST of mRNA_F-serratus_M_contig6235.17077.1 vs. uniprot
Match: A0A6H5L200_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L200_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 6.010e-9
Identity = 25/65 (38.46%), Postives = 43/65 (66.15%), Query Frame = 0
Query:   46 TVKHLETVQGGALLHSGVLVALTGCTFEFNMAGEDGLAVMSLGIADNISDLSFRNNSFFCPSGKY 110
            +V ++    GGAL+H+ ++  ++   FE N AG +G AV+SLGI ++++ + F+ N F+CP G Y
Sbjct:   10 SVYNVAESSGGALVHARMITEMSSTVFEGNDAGNEGPAVLSLGIVESMTGVVFQENGFYCPVGTY 74          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6235.17077.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JWI3_9PHAE1.740e-2247.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPF6_ECTSI1.320e-1842.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FUB6_ECTSI1.240e-1637.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2Z8_ECTSI2.770e-935.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L200_9PHAE6.010e-938.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 8..24
e-value: 0.0023
score: 15.7
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 4..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6235contigF-serratus_M_contig6235:35744..36268 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6235.17077.1mRNA_F-serratus_M_contig6235.17077.1Fucus serratus malemRNAF-serratus_M_contig6235 35744..36268 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6235.17077.1 ID=prot_F-serratus_M_contig6235.17077.1|Name=mRNA_F-serratus_M_contig6235.17077.1|organism=Fucus serratus male|type=polypeptide|length=129bp
GPSNITGCRFDGNNATDGGAIYTAAGYDRVVNSSFTRNFAGIIASTVKHL
ETVQGGALLHSGVLVALTGCTFEFNMAGEDGLAVMSLGIADNISDLSFRN
NSFFCPSGKYGFTEDSELVEVRPCPTRCS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003368POMP_repeat
IPR011050Pectin_lyase_fold/virulence