prot_F-serratus_M_contig6228.17072.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6228.17072.1
Unique Nameprot_F-serratus_M_contig6228.17072.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length390
Homology
BLAST of mRNA_F-serratus_M_contig6228.17072.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 9.970e-88
Identity = 162/391 (41.43%), Postives = 229/391 (58.57%), Query Frame = 0
Query:    1 RDPRGVSGVSGAVGRLNKAIYELVQAGRCWNNTF--CDMTAIGFEQAKADPCVFRKAVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQYLYVESMIKRFDVKKEAKVPVASGVPTLSRADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSCAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDGKHHLVRDASYAKRVRVAYVRSEDQHADLLTKPLDVKKFCKHAKFILNV 388
            R P+G   +SG + +L K++Y L QA R W+     C + A+GFEQ  AD CVFR   DG   +++VVHVDDI A   ++   D+F A+L +   +K++G+  +Y GC   RN++T  L   Q  + + +   + V     VP++SGV  LS  D  +   E      FP+RE VG+LMW AT TRPDIA AVRAVAR+C +P   H  A M I  Y   T  +GI++  G   G  ++ Y D+DF +    RRSVS  ++    GA+SW SR Q+     T+EAEYVAL + VK++LFLRQ+  FM P + +  + VFEDN+GAI+LA N  ++  +KHID +HH +R+    K + V +V S  Q AD LTK L    F  H  F++N+
Sbjct:   80 RLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRC-LVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFDADEVATE------FPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHRDFVMNL 461          
BLAST of mRNA_F-serratus_M_contig6228.17072.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 279 bits (713), Expect = 7.890e-87
Identity = 158/390 (40.51%), Postives = 230/390 (58.97%), Query Frame = 0
Query:    1 RDPRGVSGVSGAVGRLNKAIYELVQAGRCWNNTFCD-MTAIGFEQAKADPCVFRKAVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQYLYVESMIKRFDVKKEAKVPVASGVPTLSRADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSCAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDGKHHLVRDASYAKRVRVAYVRSEDQHADLLTKPLDVKKFCKHAKFILNV 388
            R P G   +SG + +LNK++Y L QA R W++     +  +GF Q  AD CVFR   +G   + +VVHVDDI +  +++   D+F  +L     +K++GD  +Y GC   R+     LK  Q  Y E +   F V+   ++P+  G+  LS  D+       EE+  +P+RE +G+LMW AT TRPDIA AVRAVAR+C +P   H +A + I  Y++ T D GIT+  G   GL ME + D+D+ +    RRSVS  ++M   G ISW SR Q+     T+EAEYV+LA+ +K+VLFLRQV  FM P   +  + VFEDN+GAI+LA N  ++  +KHID +HH +R+    K + + +V S  QHAD LTK L    F  H  +++++
Sbjct:   56 RLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFDQ------DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYVMSM 437          
BLAST of mRNA_F-serratus_M_contig6228.17072.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 279 bits (713), Expect = 7.960e-85
Identity = 158/390 (40.51%), Postives = 230/390 (58.97%), Query Frame = 0
Query:    1 RDPRGVSGVSGAVGRLNKAIYELVQAGRCWNNTFCD-MTAIGFEQAKADPCVFRKAVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQYLYVESMIKRFDVKKEAKVPVASGVPTLSRADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSCAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDGKHHLVRDASYAKRVRVAYVRSEDQHADLLTKPLDVKKFCKHAKFILNV 388
            R P G   +SG + +LNK++Y L QA R W++     +  +GF Q  AD CVFR   +G   + +VVHVDDI +  +++   D+F  +L     +K++GD  +Y GC   R+     LK  Q  Y E +   F V+   ++P+  G+  LS  D+       EE+  +P+RE +G+LMW AT TRPDIA AVRAVAR+C +P   H +A + I  Y++ T D GIT+  G   GL ME + D+D+ +    RRSVS  ++M   G ISW SR Q+     T+EAEYV+LA+ +K+VLFLRQV  FM P   +  + VFEDN+GAI+LA N  ++  +KHID +HH +R+    K + + +V S  QHAD LTK L    F  H  +++++
Sbjct:  230 RLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFDQ------DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYVMSM 611          
BLAST of mRNA_F-serratus_M_contig6228.17072.1 vs. uniprot
Match: A0A6H5JWK8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWK8_9PHAE)

HSP 1 Score: 265 bits (677), Expect = 4.020e-82
Identity = 152/392 (38.78%), Postives = 229/392 (58.42%), Query Frame = 0
Query:    1 RDPRGVSGVSGAVGRLNKAIYELVQAGRCWNNTF--CDMTAIGFEQAKADPCVFRKAVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQYLYVESMIKRFDVKKEAKVPVASGVPTLSRADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSCAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDGKHHLVRDASYAKRVRVAYVRSEDQHADLLTKPLDVKKFCKHAKFILNVV 389
            R P G   +SG + +LNK++Y L QA R W      C + A+GFEQ  AD CVFR   DGE  +++VVHVDDI A    K   D+F  +LG+   +K +G+ ++Y GC+  R+R+   L   Q  Y + + +R  V+    +P+    PT  R  +    E   E   +P+R  +G+L+W A +TRPDIA AVRAVAR+C  P   H +A + I  Y + T  +GI++  G   G  +  + D+D+ +    RRSVS  V+M A GAI+W S+ Q+     T++AEYVA+A+  K++LFLR+V  FM P      + ++EDNEGAI++A +  ++  +KHID +HH +R     K V + +V S+ QHAD LTK L  + F  H  +++N++
Sbjct:    2 RLPEGCGALSGKIVQLNKSLYGLRQASREWYALLKKC-LLALGFEQCMADSCVFRLVEDGEVVLILVVHVDDIFA-VGTKERCDQFGKDLGEYVPVKSLGELQWYSGCYYERDREAGRLTISQETYTKELGERHGVEWGGGIPL----PTTWRLWDSDVNEPSVE---YPFRALIGSLLWVALLTRPDIANAVRAVARYCSEPKLIHWRAALGILGYAVRTSSFGISFQRGTVSGFSLITFADADYASRAADRRSVSGGVVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMADMGKEILFLREVWRFMLPKELRPCIPLYEDNEGAIQIAKHPISNSNSKHIDVRHHFLRQLVDEKEVEIIHVASQYQHADFLTKALPERDFVFHRDYVMNLM 384          
BLAST of mRNA_F-serratus_M_contig6228.17072.1 vs. uniprot
Match: A0A6H5J4N2_9PHAE (Integrase catalytic domain-containing protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4N2_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 2.150e-81
Identity = 162/391 (41.43%), Postives = 229/391 (58.57%), Query Frame = 0
Query:    1 RDPRGVSGVSGAVGRLNKAIYELVQAGRCWNNTF--CDMTAIGFEQAKADPCVFRKAVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQYLYVESMIKRFDVKKEAKVPVASGVPTLSRADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSCAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDGKHHLVRDASYAKRVRVAYVRSEDQHADLLTKPLDVKKFCKHAKFILNV 388
            R P+G   +SG + +L K++Y L QA R W+     C + A+GFEQ  AD CVFR   DG   +++VVHVDDI A   ++   D+F A+L +   +K++G+  +Y GC   RN++T  L   Q  + + +   + V     VP++SGV  LS  D  +   E      FP+RE VG+LMW AT TRPDIA AVRAVAR+C +P   H  A M I  Y   T  +GI++  G   G  ++ Y D+DF +    RRSVS  ++    GA+SW SR Q+     T+EAEYVAL + VK++LFLRQ+  FM P + +  + VFEDN+GAI+LA N  ++  +KHID +HH +R+    K + V +V S  Q AD LTK L    F  H  F++N+
Sbjct: 1416 RLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRC-LVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFDADEVATE------FPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHRDFVMNL 1797          
BLAST of mRNA_F-serratus_M_contig6228.17072.1 vs. uniprot
Match: A0A6H5JG40_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG40_9PHAE)

HSP 1 Score: 281 bits (718), Expect = 2.310e-81
Identity = 160/391 (40.92%), Postives = 229/391 (58.57%), Query Frame = 0
Query:    1 RDPRGVSGVSGAVGRLNKAIYELVQAGRCWNNTF--CDMTAIGFEQAKADPCVFRKAVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQYLYVESMIKRFDVKKEAKVPVASGVPTLSRADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSCAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDGKHHLVRDASYAKRVRVAYVRSEDQHADLLTKPLDVKKFCKHAKFILNV 388
            R P+G   +SG + +L K++Y L QA R W+     C + A+GFEQ  AD CVFR   DG   +++VVHVDDI A   ++   D+F A+L +   +K++G+  +Y GC   RN++T  L   Q  + + +   + V     VP++SGV  LS  D  +   +      FP+RE VG+LMW AT TRPDIA AVRAVAR+C +P   H  A M I  Y   T  +GI++  G   G  ++ Y D+DF +    RRSVS  ++    GA+SW SR Q+     T+EAEYVAL + VK++LFLRQ+  FM P + +  + +FEDN+GAI+LA N  ++  +KHID +HH +R+    K + V +V S  Q AD LTK L    F  H  F++N+
Sbjct:  910 RLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRC-LVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFDADEVATD------FPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSKDAFESHRDFVMNL 1291          
BLAST of mRNA_F-serratus_M_contig6228.17072.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE)

HSP 1 Score: 277 bits (709), Expect = 1.380e-80
Identity = 157/390 (40.26%), Postives = 230/390 (58.97%), Query Frame = 0
Query:    1 RDPRGVSGVSGAVGRLNKAIYELVQAGRCWNNTFCD-MTAIGFEQAKADPCVFRKAVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQYLYVESMIKRFDVKKEAKVPVASGVPTLSRADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSCAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDGKHHLVRDASYAKRVRVAYVRSEDQHADLLTKPLDVKKFCKHAKFILNV 388
            R P G   +SG + +LNK++Y L QA R W++     +  +GF Q  AD CVFR   +G   + +VVHVDDI +  +++   D+F  +L     +K++GD  +Y GC   R+     LK  Q  Y E +   F V+   ++P+  G+  LS  D+       EE+  +P+RE +G+LMW AT TRPDIA AVRAVAR+C +P   H +A + I  Y++ T D GIT+  G   GL ME + D+D+ +    RRSVS  ++M   G ISW SR Q+     T+EAEYV+LA+ +K+VLFLRQV  FM P   +  + VFEDN+GAI+LA N  ++  +KHID +HH +R+    K + + +V S  QHA+ LTK L    F  H  +++++
Sbjct:  751 RLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFDQ------DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHAEFLTKALHAGDFEFHRNYVMSM 1132          
BLAST of mRNA_F-serratus_M_contig6228.17072.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 262 bits (669), Expect = 3.030e-80
Identity = 151/391 (38.62%), Postives = 225/391 (57.54%), Query Frame = 0
Query:    1 RDPRGVSGVSGAVGRLNKAIYELVQAGRCWNN--TFCDMTAIGFEQAKADPCVFRKAVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQYLYVESMIKRFDVKKEAKVPVASGVPTLSRADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSCAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDGKHHLVRDASYAKRVRVAYVRSEDQHADLLTKPLDVKKFCKHAKFILNV 388
            R P+G   +SG + +L K++Y L QA R W++  T C +  +GF Q  AD CVFR   +G   M++VVHVDDI A  + K   D+F  +L +   +K++G+  +Y  C   R+ +   L+  Q  + E +   + ++    VP+   V  L+  DE       E     P+RE VG+LMW AT TRPDIA AVRAVAR+C +P   H KA + I  Y+  T   GIT+  G   G+ M+ + D+D+ +    RRSVS  ++M   G ++W SR Q+     T+EAEYVA+A+ +K+VLFLRQV  FM P   +  + VFEDN+GAI++A N   +  +KHID +HH +R+    K + + +V +  QHAD LTK +  +    H  F++N+
Sbjct:   56 RLPQGCGRLSGLIVKLCKSLYGLKQASRHWHSHLTRC-LLLLGFLQCLADACVFRLMEEGRVIMIIVVHVDDIFAVGQ-KERCDKFGEDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVSV-KLTDFDE------NEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTHFQHADFLTKAISKESLGLHRDFVMNL 437          
BLAST of mRNA_F-serratus_M_contig6228.17072.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 259 bits (663), Expect = 3.980e-80
Identity = 147/383 (38.38%), Postives = 223/383 (58.22%), Query Frame = 0
Query:    9 VSGAVGRLNKAIYELVQAGRCWNN--TFCDMTAIGFEQAKADPCVFRKAVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQYLYVESMIKRFDVKKEAKVPVASGVPTLSRADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSCAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDGKHHLVRDASYAKRVRVAYVRSEDQHADLLTKPLDVKKFCKHAKFILNV 388
            +SG + +L K++Y L QA R W+   T C +  +GF Q  AD CVFR   +G   M++VVHVDDI A  + K   D+F  +L +   +K++G+  +Y  C   R+ +   L+  Q  + E +   + ++    VP+   V  L+  DE ++  +       P+RE VG+LMW AT TRPDIA AVRAVAR+C +P   H KA + I  Y+  T   GIT+  G   G+ M+ + D+D+ +    RRSVS  ++M   G ++W SR Q+     T+EAEYVA+A+ +K+VLFLRQV  FM P   +  + VFEDN+GAI++  N   +  +KHID +HH +R+    K + + +V ++ QHAD LTK +  + F  H  F++N+
Sbjct:    2 LSGLIVKLCKSLYGLKQASRHWHAHLTRC-LLLLGFLQCLADACVFRLMEEGRVIMIIVVHVDDIFAVGQ-KERCDKFGEDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVSV-KLTDFDENEASAD------VPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAISKESFALHRDFVMNL 375          
BLAST of mRNA_F-serratus_M_contig6228.17072.1 vs. uniprot
Match: A0A6G0MK94_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=A0A6G0MK94_9STRA)

HSP 1 Score: 260 bits (664), Expect = 1.560e-79
Identity = 151/365 (41.37%), Postives = 231/365 (63.29%), Query Frame = 0
Query:   16 LNKAIYELVQAGRCWNNTFCD-MTAIGFEQAKADPCVFRKAVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDAEYYMGCHITRNRKTRELKFDQYLYVESMIKRFDVKKEAK---VPVASGVPTLSRADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSCAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDGKHHLVRDASYAKRVRVAYVRSEDQHADLLTKPLDVK 376
            L +++Y L QA R WN T    + ++GFE A ADPCV+ +  +GE E +V ++VDD+L  ++ KA +    A + +KF++KD+G A + +G  I  + + R L   Q  Y ES+IK+F  ++ AK    P+  GV  L++ADEPQ+ E+K +MK  PYR  VG+LM+ A  TRPDI+ AV  ++RF ENPG  H  A +K+ +YLL TKD GI Y G   G  +EAY+D+++    D RRSVS  +LML    + W S  Q+  A  ++EAEY+AL++ VK+ +++R++ + +    +VGA+ ++EDN+GA+ LA N     RTKHID ++H +R+   +  V + YV +++Q AD +TK L  K
Sbjct:   57 LLQSLYGLKQASRVWNETIDKHLKSMGFEPADADPCVYTRG-EGEGECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFG-QENAKPWLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDANWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAE-QVGAMVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIREKVVSSEVELEYVDTKNQLADFMTKGLSSK 416          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6228.17072.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFG2_9PHAE9.970e-8841.43Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JLN0_9PHAE7.890e-8740.51Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQB8_9PHAE7.960e-8540.51Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JWK8_9PHAE4.020e-8238.78Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5J4N2_9PHAE2.150e-8141.43Integrase catalytic domain-containing protein n=18... [more]
A0A6H5JG40_9PHAE2.310e-8140.92Integrase catalytic domain-containing protein n=3 ... [more]
A0A6H5K2R1_9PHAE1.380e-8040.26Integrase catalytic domain-containing protein n=3 ... [more]
A0A6H5JEF2_9PHAE3.030e-8038.62Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L4G9_9PHAE3.980e-8038.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6G0MK94_9STRA1.560e-7941.37Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 10..137
e-value: 1.1E-21
score: 77.6
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 167..378
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 167..378

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6228contigF-serratus_M_contig6228:20444..21613 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6228.17072.1mRNA_F-serratus_M_contig6228.17072.1Fucus serratus malemRNAF-serratus_M_contig6228 20444..21613 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6228.17072.1 ID=prot_F-serratus_M_contig6228.17072.1|Name=mRNA_F-serratus_M_contig6228.17072.1|organism=Fucus serratus male|type=polypeptide|length=390bp
RDPRGVSGVSGAVGRLNKAIYELVQAGRCWNNTFCDMTAIGFEQAKADPC
VFRKAVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDVGDA
EYYMGCHITRNRKTRELKFDQYLYVESMIKRFDVKKEAKVPVASGVPTLS
RADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCEN
PGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTR
RSVSCAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEAVKDVLFLRQV
QEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDGKHHLVRDASY
AKRVRVAYVRSEDQHADLLTKPLDVKKFCKHAKFILNVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like