prot_F-serratus_M_contig622.17061.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig622.17061.1
Unique Nameprot_F-serratus_M_contig622.17061.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length517
Homology
BLAST of mRNA_F-serratus_M_contig622.17061.1 vs. uniprot
Match: D7G0L6_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0L6_ECTSI)

HSP 1 Score: 412 bits (1059), Expect = 6.340e-125
Identity = 200/311 (64.31%), Postives = 234/311 (75.24%), Query Frame = 0
Query:  205 GGSLWFKVEHVVCFLQLLALALDVDGASWPPLFVKVWSWTWFTTGYLRWPLLALIRRVGWEFSLTFGEGERDLWFFRDVVGYGLEVYATVVVAFALFFVFEMPDYTGHEPKAAWKRSFLTSWFRLTLLRYLLNLSLCFAMLFALAYYGTLIFPEEVVKGVVVVGGALVMVTWLSVVILSFAVHVAIRVVTKHDAEYSFITAIKHAVKIKGRVCLFILHLVYIPVTVSIVRALLPVFDWNKNWTKESRRHYYNYHVSCYFLGFPPQLSDYTRSITVLDCTSESGVAVYTLSVCLLLLFTCGLPNMVRQDHAF 515
            GGSLWFK E +V  LQLLALALDV GA WPPLFV++WSW W T  YLRWP L L+RRVG EFSLTFG+ + DLWFFRDV+GYG+EV A  V  F  FFV +MPDYT  +PKAAW+RSFLT WFR TL RYLLNL LC+     + Y+G +  P +VVK V+VVGG L+ V+W+ VV+LS  VHV +R+ TKHDAEYSF+ A+KH VK KGR CLF LHL Y+P+T SIVRAL+P FDWN  W  ESRR Y N+HV C F+GFPPQL   T  + VL+CTS SGVAV+TLS CL+L F CGLPNMVR    F
Sbjct:   86 GGSLWFKAERIVITLQLLALALDVYGAPWPPLFVRMWSWVWLTNQYLRWPALVLLRRVGREFSLTFGDAQLDLWFFRDVIGYGVEVCAASVAVFVFFFVLQMPDYTSSKPKAAWRRSFLTHWFRRTLPRYLLNLGLCYVAFAGVTYFGEVFVPPDVVKAVIVVGGTLLTVSWILVVLLSLLVHVNVRMATKHDAEYSFMIAMKHVVKTKGRTCLFFLHLAYVPLTASIVRALVPEFDWNDKWAHESRREY-NHHVWCNFMGFPPQLEG-TAEMIVLECTSTSGVAVHTLSACLVLFFACGLPNMVRYLVRF 394          
BLAST of mRNA_F-serratus_M_contig622.17061.1 vs. uniprot
Match: A0A835YNL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNL2_9STRA)

HSP 1 Score: 184 bits (467), Expect = 3.230e-46
Identity = 127/376 (33.78%), Postives = 172/376 (45.74%), Query Frame = 0
Query:  206 GSLWFKVEHVVCFLQLLALALDVDGASWPPLFVKVWSWTWFTTGYLRWPLLALIRRVGWEFSLTFGEGERDLWFFRDVVGYGLEVYATVVVAFALFFVFEMPDYTGHEPKAAWKRSFLTSWFRLTLLRYLLNLSLCFAMLFALAYYGTLIFPEEVVKGVVVVGGALVMVTWLSVVILSFAVHVAIRVVTKHDAEYSFITAIKHAVKI------------------------------------------------------------------------KGRVCLFILHLVYIPVTVSIVRALLPVFDWNKNWTKESRRHYYNYHVSCYFLGFPPQ-LSDYTRSITVLDCTSESGVAVYTLSVCLLLLFTCGLPNM 508
            G+LWFKVE VV FLQ+L LA  V   SWPP+F  +W W+ +   + R PL  L+R        T  +G   LW +R VVGY  E        F L  V  MPDY        W+R +LT W+  +LLRYL   S+  A++ AL  YG L FPE VV G  V   AL  V    VV LSFA+H+ +R   +HDA+YSF   ++  V                                                                          K R+CL +L ++Y+PV+VS+++AL P+ DWN   T    R  +N++++CY+  FPPQ L      + V+ C S SG+  Y LS  LL L+  GLP +
Sbjct:  135 GTLWFKVERVVHFLQVLWLARQVPVDSWPPVFTALWGWSSWAATFARTPLPWLLRWAEHRAGYTLPDG-LSLWHYRSVVGYTAEAAVPAFAVFVLLHVLSMPDYADPAACRRWERLYLTHWYTRSLLRYLAWGSVAAAIVAALRIYGDLAFPEAVVAGAAVSLAALASVLGGIVVALSFAIHLRLRDAARHDAKYSFGIMVRAVVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVDMDVGIVFVKTMVTEVATKNEGQADGGGKVRMCLLVLSIIYLPVSVSVLQALSPMVDWNDT-TAIPVRARHNFNIACYYAAFPPQVLPGGAAPVAVMGCASRSGLCNYALSSVLLALYLGGLPAL 508          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig622.17061.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0L6_ECTSI6.340e-12564.31Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
A0A835YNL2_9STRA3.230e-4633.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 325..351
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 352..362
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..207
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 208..226
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 416..437
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 227..282
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 488..509
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 438..487
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 387..415
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 363..386
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 283..304
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 305..324
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 510..516
NoneNo IPR availableTMHMMTMhelixcoord: 416..438
NoneNo IPR availableTMHMMTMhelixcoord: 283..305
NoneNo IPR availableTMHMMTMhelixcoord: 334..356
NoneNo IPR availableTMHMMTMhelixcoord: 487..509
NoneNo IPR availableTMHMMTMhelixcoord: 366..388

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig622contigF-serratus_M_contig622:359947..362008 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig622.17061.1mRNA_F-serratus_M_contig622.17061.1Fucus serratus malemRNAF-serratus_M_contig622 359947..363065 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig622.17061.1 ID=prot_F-serratus_M_contig622.17061.1|Name=mRNA_F-serratus_M_contig622.17061.1|organism=Fucus serratus male|type=polypeptide|length=517bp
MRVKKYKRVRRQKIQPELHELTKDQRGTSTKGGISQAPGRTEESESCSAV
EGDDERGQEISGSDLGQNNAVLSEKSQGHDTNAAAGTIDEKAGNKLSRNK
GNNLIPSGTDRESVDVTDVHASTISVPPSKSNGDDDTPPGNPTPRTIACS
EEVSLTPPGSSHEYGRAANVPSTHREGQDIREDNDTLSSDRGGSNCEKGK
FLVSGGSLWFKVEHVVCFLQLLALALDVDGASWPPLFVKVWSWTWFTTGY
LRWPLLALIRRVGWEFSLTFGEGERDLWFFRDVVGYGLEVYATVVVAFAL
FFVFEMPDYTGHEPKAAWKRSFLTSWFRLTLLRYLLNLSLCFAMLFALAY
YGTLIFPEEVVKGVVVVGGALVMVTWLSVVILSFAVHVAIRVVTKHDAEY
SFITAIKHAVKIKGRVCLFILHLVYIPVTVSIVRALLPVFDWNKNWTKES
RRHYYNYHVSCYFLGFPPQLSDYTRSITVLDCTSESGVAVYTLSVCLLLL
FTCGLPNMVRQDHAFN*
back to top