prot_F-serratus_M_contig6219.17050.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig6219.17050.1
Unique Name	prot_F-serratus_M_contig6219.17050.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	258

Homology

[Close]

BLAST of mRNA_F-serratus_M_contig6219.17050.1 vs. uniprot
Match: D7G4J8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4J8_ECTSI)

HSP 1 Score: 231 bits (590), Expect = 5.750e-69
Identity = 134/213 (62.91%), Postives = 159/213 (74.65%), Query Frame = 0

Query:    1 KQYFNCFGLDDTEYLPEVEGADLEIPWAAGXXXXXXXSSMAADTGLAVALGHAVAAAVALTHVIFFVLLFLNIEPVPVRGYMYMRGLGLMTALSSFYLIFTGVVSFFFGVKDSLDSYMESSSGLRPSWAYILTVVDVILMMLVATKACHDDQVDAAIATPQYTSSSRNEDTVKRASGQLLHLRSKSSDTILEGSAT-NLP----TSAPKATTG 208
            K+   CFGL + E   E E         AG        SM ADTGLAVALGHAVAAAVA  H++FFVLL+ NI+P PVRGY+YMRGLGLM+AL+SFYL+FT VVSFFF +K SLD  M +S+GLRPSWAY+LTV+DV +M++V   AC D++VDAAIATPQYTSSSR+EDTVKRA+G+LLHLRSKS DT  E S + N P    +SAPKAT G
Sbjct:   66 KEDSGCFGLAEKELEDETEAV------LAGGR------SMDADTGLAVALGHAVAAAVASIHILFFVLLYFNIDPAPVRGYLYMRGLGLMSALTSFYLLFTCVVSFFFAIKGSLDVNMSTSAGLRPSWAYVLTVIDVTIMVVVGMLACQDEEVDAAIATPQYTSSSRDEDTVKRANGKLLHLRSKSGDTFCEASTSLNGPDASASSAPKATVG 266

[Close]

BLAST of mRNA_F-serratus_M_contig6219.17050.1 vs. uniprot
Match: A0A6H5JHQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ9_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 1.910e-13
Identity = 52/96 (54.17%), Postives = 63/96 (65.62%), Query Frame = 0

Query:  134 VVDVILMMLVATKACHDDQVDAAIATPQ----------------YTSSSRNEDTVKRASGQLLHLRSKSSDTILEGSAT-NLP----TSAPKATTG 208
            V+DV +M++V   AC D++VDAAIATPQ                YTSSSR+EDTVKRA+G+LLHLRSKS DT  E S + N P    +SAPKAT G
Sbjct:   12 VIDVTIMVVVGMLACQDEEVDAAIATPQIDTPRAVRLNSYLVFQYTSSSRDEDTVKRANGKLLHLRSKSGDTFCEASTSLNGPDASASSAPKATVG 107

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig6219.17050.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig6219.17050.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G4J8_ECTSI	5.750e-69	62.91	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JHQ9_9PHAE	1.910e-13	54.17	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 46..71
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 83..108
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 72..82
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 128..145
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 109..127
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..45
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 146..258
None	No IPR available	TMHMM	TMhelix		coord: 86..108
None	No IPR available	TMHMM	TMhelix		coord: 128..145
None	No IPR available	TMHMM	TMhelix		coord: 51..73

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig6219	contig	F-serratus_M_contig6219:19176..25693 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig6219.17050.1	mRNA_F-serratus_M_contig6219.17050.1	Fucus serratus male	mRNA	F-serratus_M_contig6219 19176..25694 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig6219.17050.1 ID=prot_F-serratus_M_contig6219.17050.1|Name=mRNA_F-serratus_M_contig6219.17050.1|organism=Fucus serratus male|type=polypeptide|length=258bp
KQYFNCFGLDDTEYLPEVEGADLEIPWAAGEIPWAAGSSMAADTGLAVAL
GHAVAAAVALTHVIFFVLLFLNIEPVPVRGYMYMRGLGLMTALSSFYLIF
TGVVSFFFGVKDSLDSYMESSSGLRPSWAYILTVVDVILMMLVATKACHD
DQVDAAIATPQYTSSSRNEDTVKRASGQLLHLRSKSSDTILEGSATNLPT
SAPKATTGVAGNSDGDDVELGVGGRLPLVSVSSVSLSLIGGSRAAGPSIT
TTAGAAGA