prot_F-serratus_M_contig621.17045.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig621.17045.1
Unique Nameprot_F-serratus_M_contig621.17045.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length868
Homology
BLAST of mRNA_F-serratus_M_contig621.17045.1 vs. uniprot
Match: A0A6H5KGG6_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGG6_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 3.920e-23
Identity = 85/203 (41.87%), Postives = 113/203 (55.67%), Query Frame = 0
Query:   11 VAFTLREYWVRAAARWSRNRDAEAMPRGVSRKARQQMVRIRIAKRPASGRVAKRSKLNFSGKQQQQQEIAPWGSSIIASNSGSSNKTRLKRNSSGLTAHVSPKGSKE-GYEDSDAAVAVKVKRG-LLGVCQRR-----ASSDVVLVPSRETCVICMENFRPGEVLEVLLCQHIYHVRCIDRWLGANTWCCVCKADVEEMARAV 206
            +A TL   W     R +R  + E   RGVSRK + +   IR+  + +S   A R + +        +E +    + + + +G   +T +   SSG      P   KE G   S AAVAVKV++G L GV +R      A  DVV VP+ E CVICME F+  +VLEVLLCQH+YH RCI  WLG++T CCVC AD+EEMARA 
Sbjct:    1 MATTLSGCWQWWPMRRARRSERETS-RGVSRKVKSRFTTIRMPAQVSSAGPAGRGRPHSPSDGGGGEETSSVSCAALGAVAGL--ETDIIGESSGGAIGRHPSQQKEDGDSQSAAAVAVKVRKGGLFGVLRRPTFGGGADDDVVHVPAGEICVICMEPFQANDVLEVLLCQHLYHQRCIHEWLGSHTSCCVCMADMEEMARAT 200          
BLAST of mRNA_F-serratus_M_contig621.17045.1 vs. uniprot
Match: A0A7S3B8E0_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3B8E0_9VIRI)

HSP 1 Score: 74.7 bits (182), Expect = 2.500e-10
Identity = 62/157 (39.49%), Postives = 84/157 (53.50%), Query Frame = 0
Query:  125 AVAVKVKRGLLGVCQRRASSDVVLVPSRETCVICMENFRPGEVLEVLLCQHIYHVRCIDRWLGANTWCC-VCKADVEEMARAVRQRPRPRFSRSRSDNIGTRWDDSSESTRSGPPYISQRARSAPSA-AAPSARP--GPIDATSR-GGRSGQTVYGS 276
            A A +V+R L     RRA+    L    ++C IC+++F PGE L+VL CQH++H +C+D+WL +    C +CKAD      A  +   PR S  R+  + T    S    R+G P     A SAPSA A+ SA P  GP  A +  GG  GQT  GS
Sbjct:  257 ATAAQVRR-LKSFTYRRAAQ---LPHDADSCSICLDDFEPGEKLKVLRCQHVFHQKCVDKWLVSRRAICPLCKADPF----ATEEEEAPRASNERTPLLATHRSRSGSDERAGGPTS---AHSAPSAFASSSAAPLDGPEAAEAGPGGGGGQTSVGS 402          
BLAST of mRNA_F-serratus_M_contig621.17045.1 vs. uniprot
Match: D7G9G3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G3_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 9.370e-10
Identity = 38/68 (55.88%), Postives = 46/68 (67.65%), Query Frame = 0
Query:  117 EGYEDSDAAVAVKVKRG-LLGVCQRR-----ASSDVVLVPSRETCVICMENFRPGEVLEVLLCQHIYH 178
            +G     AAVAVKV++G L GV +R      A  DVV VP+ E CVICME F+  +VLEVLLCQH+YH
Sbjct:  103 DGDSQPAAAVAVKVRKGGLFGVLRRTTVGGGADDDVVHVPAGEICVICMEPFQANDVLEVLLCQHMYH 170          
BLAST of mRNA_F-serratus_M_contig621.17045.1 vs. uniprot
Match: A0A852K9N4_UROIN (RN128 ligase (Fragment) n=1 Tax=Urocolius indicus TaxID=458196 RepID=A0A852K9N4_UROIN)

HSP 1 Score: 69.3 bits (168), Expect = 5.700e-9
Identity = 29/60 (48.33%), Postives = 40/60 (66.67%), Query Frame = 0
Query:  145 DVVLVPSRETCVICMENFRPGEVLEVLLCQHIYHVRCIDRWLGANTWCCVCKADVEEMAR 204
            D  L P  E CV+C+E F+P EV+ VL C+H++H RCIDRWL  +  C +CK D+  + R
Sbjct:  241 DKELGPDGEMCVVCLEPFQPKEVVRVLTCKHLFHQRCIDRWLLEHRTCPLCKWDIFNVLR 300          
BLAST of mRNA_F-serratus_M_contig621.17045.1 vs. uniprot
Match: A0A5A8DP02_CAFRO (RING-type domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DP02_CAFRO)

HSP 1 Score: 66.6 bits (161), Expect = 1.060e-8
Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 0
Query:  151 SRETCVICMENFRPGEVLEVLLCQHIYHVRCIDRWLGANTWCCVCKADVEE 201
            +R  C++C+E+F PGE L +L C H +H +CIDRWLG    C VCK+ + +
Sbjct:  142 ARTRCLVCLEDFVPGETLRLLPCIHFFHAKCIDRWLGEKAECPVCKSSIRD 192          
BLAST of mRNA_F-serratus_M_contig621.17045.1 vs. uniprot
Match: A0A5A8CCH3_CAFRO (RING-type domain-containing protein n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8CCH3_CAFRO)

HSP 1 Score: 66.6 bits (161), Expect = 2.610e-8
Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 0
Query:  151 SRETCVICMENFRPGEVLEVLLCQHIYHVRCIDRWLGANTWCCVCKADVEE 201
            +R  C++C+E+F PGE L +L C H +H +CIDRWLG    C VCK+ + +
Sbjct:  198 ARTRCLVCLEDFVPGETLRLLPCIHFFHAKCIDRWLGEKAECPVCKSSIRD 248          
BLAST of mRNA_F-serratus_M_contig621.17045.1 vs. uniprot
Match: A0A670JA11_PODMU (RING-type domain-containing protein n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670JA11_PODMU)

HSP 1 Score: 61.2 bits (147), Expect = 3.410e-8
Identity = 21/40 (52.50%), Postives = 30/40 (75.00%), Query Frame = 0
Query:  153 ETCVICMENFRPGEVLEVLLCQHIYHVRCIDRWLGANTWC 192
            ETCV+C+E ++P EV+ +L C+H++H RCIDRW   N  C
Sbjct:   19 ETCVVCLETYKPREVVRILTCRHVFHKRCIDRWFSFNHPC 58          
BLAST of mRNA_F-serratus_M_contig621.17045.1 vs. uniprot
Match: UPI0005288243 (E3 ubiquitin-protein ligase RNF128 n=1 Tax=Eurypyga helias TaxID=54383 RepID=UPI0005288243)

HSP 1 Score: 66.2 bits (160), Expect = 3.660e-8
Identity = 24/50 (48.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:  150 PSRETCVICMENFRPGEVLEVLLCQHIYHVRCIDRWLGANTWCCVCKADV 199
            P  +TCV+CME ++P EV+ VL C H++H  CID WL  +  C +CK D+
Sbjct:  110 PDEDTCVVCMELYKPNEVVRVLTCNHLFHKNCIDPWLLEHRTCPMCKCDI 159          
BLAST of mRNA_F-serratus_M_contig621.17045.1 vs. uniprot
Match: A0A2C9WCP9_MANES (RING-type domain-containing protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9WCP9_MANES)

HSP 1 Score: 66.2 bits (160), Expect = 5.230e-8
Identity = 33/77 (42.86%), Postives = 49/77 (63.64%), Query Frame = 0
Query:  125 AVAVKVKRGLLGVCQRRASSDVVLVPSRETCVICMENFRPGEVLEVLLCQHIYHVRCIDRWLGA-NTWCCVCKADVE 200
            +V V+V  GL   C    S+ +    +RETC IC+E+++ GE+L+VL CQH +H  C+D WL    T+C VCK D++
Sbjct:  201 SVDVRVLEGL--PCFTFYSTHLNCNQNRETCAICLEDYKDGEILKVLPCQHEFHSSCVDSWLTKWGTFCPVCKFDMK 275          
BLAST of mRNA_F-serratus_M_contig621.17045.1 vs. uniprot
Match: A0A670Y8J5_PSETE (RING-type domain-containing protein n=3 Tax=Elapidae TaxID=8602 RepID=A0A670Y8J5_PSETE)

HSP 1 Score: 63.2 bits (152), Expect = 6.740e-8
Identity = 22/45 (48.89%), Postives = 33/45 (73.33%), Query Frame = 0
Query:  151 SRETCVICMENFRPGEVLEVLLCQHIYHVRCIDRWLGANTWCCVC 195
            + ETCV+C+E ++P E++ +L C+HI+H RCIDRWL     C +C
Sbjct:  106 AEETCVVCLETYKPREIVRILTCRHIFHKRCIDRWLLKRGICPIC 150          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig621.17045.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGG6_9PHAE3.920e-2341.87RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S3B8E0_9VIRI2.500e-1039.49Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
D7G9G3_ECTSI9.370e-1055.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A852K9N4_UROIN5.700e-948.33RN128 ligase (Fragment) n=1 Tax=Urocolius indicus ... [more]
A0A5A8DP02_CAFRO1.060e-847.06RING-type domain-containing protein n=1 Tax=Cafete... [more]
A0A5A8CCH3_CAFRO2.610e-847.06RING-type domain-containing protein n=2 Tax=Sar Ta... [more]
A0A670JA11_PODMU3.410e-852.50RING-type domain-containing protein n=1 Tax=Podarc... [more]
UPI00052882433.660e-848.00E3 ubiquitin-protein ligase RNF128 n=1 Tax=Eurypyg... [more]
A0A2C9WCP9_MANES5.230e-842.86RING-type domain-containing protein n=1 Tax=Maniho... [more]
A0A670Y8J5_PSETE6.740e-848.89RING-type domain-containing protein n=3 Tax=Elapid... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 155..195
e-value: 8.4E-4
score: 28.6
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 154..196
e-value: 9.0E-8
score: 32.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 155..196
score: 10.38
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 138..206
e-value: 6.0E-14
score: 53.0
NoneNo IPR availablePANTHERPTHR45977FAMILY NOT NAMEDcoord: 70..201
NoneNo IPR availablePANTHERPTHR45977:SF4TARGET OF ERK KINASE MPK-1coord: 70..201
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 149..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig621contigF-serratus_M_contig621:364977..382950 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig621.17045.1mRNA_F-serratus_M_contig621.17045.1Fucus serratus malemRNAF-serratus_M_contig621 363678..382989 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig621.17045.1 ID=prot_F-serratus_M_contig621.17045.1|Name=mRNA_F-serratus_M_contig621.17045.1|organism=Fucus serratus male|type=polypeptide|length=868bp
MSSRARANRGVAFTLREYWVRAAARWSRNRDAEAMPRGVSRKARQQMVRI
RIAKRPASGRVAKRSKLNFSGKQQQQQEIAPWGSSIIASNSGSSNKTRLK
RNSSGLTAHVSPKGSKEGYEDSDAAVAVKVKRGLLGVCQRRASSDVVLVP
SRETCVICMENFRPGEVLEVLLCQHIYHVRCIDRWLGANTWCCVCKADVE
EMARAVRQRPRPRFSRSRSDNIGTRWDDSSESTRSGPPYISQRARSAPSA
AAPSARPGPIDATSRGGRSGQTVYGSQASRASQALRHGYGYGPYGPRVTN
STPRGSRAPSALRSTLALGSINNNTPRSIDIYPNSPNGMGLGSSGVNFGT
SPPGMGARTRSPSARDLTPPLIVSHMSVCTPERNVHCRGESKEEGKEEVC
SSSSSNSSIGISSSSSRSSSNRSNSSSSRSSSMVGICAGDYGQDGNDAGR
ALEIGSAENNQQRQASSARTNTSYYENAAIHRRFTRSERQAGSPRPSRLG
PQNPGLSRSKSLGRVLSLQRIFSGTPSAPARVLPHESQPGTPLARRPSSA
TLNGRARTSRSQATSLAIGTSAAPHCVGANPPWSRSLSTPAVIVSTPPRN
GARPRIASRADSPGPSPSAVQHARAGTKASRQLSPTLNTLSTPQRMVRIP
RLDHRSPTSPNHGRSTAAVRGSHRHWGSPERGLSSHVPSPPGDSPGARPW
GAGSSEVLGGRQGQRYREQCGGTGVILSARARMCVESTLPTAAQLSLRSL
PGGKVNNCPSPEEEDSWLDGFDKSPSSEAASESGSYSTQWSETVSQASGC
SDSAKTLRVEGSVASVPSRAQACYNRATSPEPQRVTRGRSRGRASRSEAE
GPRSRSRSARLIWDDGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD