prot_F-serratus_M_contig617.16967.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig617.16967.1
Unique Nameprot_F-serratus_M_contig617.16967.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length371
Homology
BLAST of mRNA_F-serratus_M_contig617.16967.1 vs. uniprot
Match: D7FHF5_ECTSI (Nup54 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHF5_ECTSI)

HSP 1 Score: 329 bits (843), Expect = 1.470e-108
Identity = 169/242 (69.83%), Postives = 200/242 (82.64%), Query Frame = 0
Query:  122 PATENVGAASTRELEKLYFSYAEKAVGSNAPNPDCRMKHVVYNQVDPNLRYSYTRPAHIDEKAWKKAEEDNPDPSKLAPAAVIGWESLKERLVVQQGEVEAMAKNVQYMRSTAGNGLRSVALLRTRMEASRRTHLAQAHRFLKIQSKLESIRFMNKPLIGEDRLLRMKLEKVQRSLDPPQQALKDLNAALLQGERMAEEVEEITDPEQLANIFEALDGQRDGMEHLMRILKKDRQDLEIMKK 363
            P   N G+AS +E EKL+ +YA K   +  PNP CRMKHVVYNQVDP+LR SYTRP H+D+K W+KAEEDNPDPSKLAPAAVIGWESLKERLV QQ E++ MA+ V  M++T   GLRSVAL+RT+MEASRR HLAQAHRFLK+Q KL+++R +NKPL  ++R LR +LE V RSL PPQQ LKDLN+ALLQGER  EEVEEITDPE+L  IF+AL+GQR+G+ HLMRI+KKDRQDLEIMKK
Sbjct:   54 PPAANAGSASQKEFEKLFEAYAAKNPANGEPNPSCRMKHVVYNQVDPSLRNSYTRPPHMDDKTWQKAEEDNPDPSKLAPAAVIGWESLKERLVGQQQEMKKMAEFVALMQNTTRGGLRSVALVRTQMEASRRRHLAQAHRFLKLQRKLDAVRCLNKPLSDDERQLRTRLEGVHRSLGPPQQTLKDLNSALLQGERHMEEVEEITDPEELRRIFQALEGQREGLTHLMRIVKKDRQDLEIMKK 295          
BLAST of mRNA_F-serratus_M_contig617.16967.1 vs. uniprot
Match: A0A024TY86_9STRA (Nup54 domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TY86_9STRA)

HSP 1 Score: 131 bits (329), Expect = 1.630e-30
Identity = 83/225 (36.89%), Postives = 122/225 (54.22%), Query Frame = 0
Query:  157 RMKHVVYNQVDPNLRYSYTRPAHIDEKAWKKAEEDNPDPSKLAPAAVIGWESLKERLVVQQGEVEA-------MAKNVQYMRSTAGNGLRSVALLRTRMEASRRTHLAQAHRFLKIQSKLESIRFMNKPLIGEDRLLRMKLEKVQRSLDPPQQ---------ALKDLNAALLQGERMAEEVEEITDPEQLANIFEALDGQRDGMEHLMRILKKDRQDLEIMKKQL 365
            R KH+ YN VDP+ ++ Y+RP H+ EK W +A+ DNPDP+ L PAAV+G++ L  R+ +QQ  ++        +   VQ M   + N          ++   R+ H+A  HR +++  KLE  + + KPL   +  L   L+ VQ  LD P Q          L+ L AAL   +R    + E    E LA +F  LD QR+G+EHL RIL +D +D++IMKK L
Sbjct:  256 RFKHMFYNAVDPSQKHLYSRPPHVGEKLWIQAQRDNPDPANLVPAAVVGFKELSTRIQLQQAHIKKFHGYAKDLVVQVQEMEKASRN-------TDVKLTQCRQQHIALFHRLVQLMRKLELFKQLRKPLHANEHHLAATLKHVQSLLDNPTQFKAHMHELMTLQSLQAALPTQQRPDAPLTE----EDLATVFRVLDKQREGLEHLTRILNQDMRDVQIMKKAL 469          
BLAST of mRNA_F-serratus_M_contig617.16967.1 vs. uniprot
Match: W4G2Y8_9STRA (Nup54 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G2Y8_9STRA)

HSP 1 Score: 127 bits (318), Expect = 4.360e-29
Identity = 78/218 (35.78%), Postives = 123/218 (56.42%), Query Frame = 0
Query:  157 RMKHVVYNQVDPNLRYSYTRPAHIDEKAWKKAEEDNPDPSKLAPAAVIGWESLKERLVVQQGEVEAMAKNVQYMRSTAGNGLRSVALLRTRMEASRRTHLAQAHRFLKIQSKLESIRFMNKPLIGEDRLLRMKLEKVQRSLDPPQQ---------ALKDLNAALLQGERMAEEVEEITDPEQLANIFEALDGQRDGMEHLMRILKKDRQDLEIMKKQL 365
            R K++ YN VDP  ++ YTRP H+ EK W +A+ DNPDP+ L PAAV+G++ L  R+ +QQ  ++      + + +   +  ++      ++   R+ H+A  HR +++  KLE  + + KPL   +  L   L+ VQ  LD P Q          L+ + AAL   +R   +   +TD E +A +F  LD QR+G+EHL RIL +D +D++IMKK L
Sbjct:  237 RFKYMFYNAVDPAQKHLYTRPPHVGEKLWIQAQRDNPDPANLVPAAVVGFKELSTRIQLQQAHIKKFHGYAKDLVAQVQDMEKASRHTDVKLTQCRQQHIALFHRLVQLMRKLELFKQLRKPLHPSEHHLAATLKHVQSLLDNPTQFKAHMHELMTLQSMQAALPNQQRPDAQ---LTD-EDMATVFRVLDKQREGLEHLTRILNQDLRDVQIMKKAL 450          
BLAST of mRNA_F-serratus_M_contig617.16967.1 vs. uniprot
Match: A0A6G0XI91_9STRA (Nup54 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XI91_9STRA)

HSP 1 Score: 126 bits (316), Expect = 1.120e-28
Identity = 76/220 (34.55%), Postives = 124/220 (56.36%), Query Frame = 0
Query:  157 RMKHVVYNQVDPNLRYSYTRPAHIDEKAWKKAEEDNPDPSKLAPAAVIGWESLKERLVVQQGEVEA-------MAKNVQYMRSTAGNGLRSVALLRTRMEASRRTHLAQAHRFLKIQSKLESIRFMNKPLIGEDRLLRMKLEKVQRSLDPPQQALKDLNAAL----LQGERMAEEVEEITDPEQLANIFEALDGQRDGMEHLMRILKKDRQDLEIMKKQL 365
            R KH+ YN VDP+L++ YTRP HI EK W +A+ DNPDP+   PAAV+G++ L  R+ +QQ E +        + K V+ M+ ++ +          ++   R+ H+A  HR +++  KLE  + + KPL  ++  L   L+++Q  LD P Q    ++  +    LQ  +     +     E +A +F  LD QR+G+EHL +IL +D +D++IM+K L
Sbjct:  251 RFKHMFYNAVDPSLKHLYTRPPHIGEKLWIQAQRDNPDPTNCVPAAVLGFKELSTRIKLQQEEAQKFHGYAKDLVKQVEEMKVSSRH-------TDVKLAQCRQQHVALCHRLVQLMRKLEVFKQLRKPLHVDELRLAAMLKQIQSMLDNPTQFKAHMHELITLQALQEAKPHHRPDAQLTEEDMATVFRLLDKQREGLEHLTKILNQDIRDVQIMQKAL 463          
BLAST of mRNA_F-serratus_M_contig617.16967.1 vs. uniprot
Match: A0A329SUH9_9STRA (Nup54 domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SUH9_9STRA)

HSP 1 Score: 124 bits (311), Expect = 3.560e-28
Identity = 81/249 (32.53%), Postives = 129/249 (51.81%), Query Frame = 0
Query:  119 AAAPATENVGA-ASTRELEKLYFSYAEKAVGSNAPNPDCRMKHVVYNQVDPNLRYSYTRPAHIDEKAWKKAEEDNPDPSKLAPAAVIGWESLKERLVVQQGEVEAMAKNVQYMRSTAGNGLRSVALLRTRMEASRRTHLAQAHRFLKIQSKLESIRFMNKPLIGEDRLLRMKLEKVQRSLDPPQQALKDLNAAL----LQGERMAEEVEEITDPEQLANIFEALDGQRDGMEHLMRILKKDRQDLEIMK 362
            + APA   +GA AS  +L  +  +Y + A          R K ++YN VDP  R+ YTRPAHI E+ W +AE DNPDP   AP  ++G++SL +R+  QQ   +   K    +R+      +       ++E  R  H+   H  +K+   +E ++   KPL  E+  L M L+K+Q  LD P Q    LN A+    +Q E       +++ P+ L  ++E +D QR G+EHL  ++  D  D++++K
Sbjct:  200 STAPAPIILGADASVAQLNTVKAAYQDPA--------QSRFKFLMYNTVDPTQRHLYTRPAHISERLWNQAELDNPDPLNCAPVPILGFDSLLKRIKAQQVHADKYNKYTDDLRAQLNEMDKQTRATEEKLEKCRHEHVQLFHALVKVMRDIELLQNYGKPLQREEMQLAMMLKKLQTLLDSPGQYKARLNDAVSLQRVQKETQPPPSSQLS-PQDLQRLYEFMDKQRQGLEHLTNMINDDLADIQLIK 439          
BLAST of mRNA_F-serratus_M_contig617.16967.1 vs. uniprot
Match: V9EUL8_PHYPR (Nup54 domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=V9EUL8_PHYPR)

HSP 1 Score: 124 bits (312), Expect = 3.650e-28
Identity = 81/247 (32.79%), Postives = 129/247 (52.23%), Query Frame = 0
Query:  121 APATENVGA-ASTRELEKLYFSYAEKAVGSNAPNPDCRMKHVVYNQVDPNLRYSYTRPAHIDEKAWKKAEEDNPDPSKLAPAAVIGWESLKERLVVQQGEVEAMAKNVQYMRSTAGNGLRSVALLRTRMEASRRTHLAQAHRFLKIQSKLESIRFMNKPLIGEDRLLRMKLEKVQRSLDPPQQALKDLNAALLQGERMAEEVE----EITDPEQLANIFEALDGQRDGMEHLMRILKKDRQDLEIMK 362
            APA   +GA AS  +L  +  +Y + A          R K ++YN VDP  R+ YTRPAHI E+ W +AE DNPDP   AP  ++G+++L +R+  QQ   E   K    +R+      +       ++E  R  H+   H  +K+   +E ++   KPL  E+  L M L+K+Q  LD P Q    LN A+   +R+ +E +     +  P+ L  ++E +D QR G+EHL  ++  D  D++++K
Sbjct:  231 APAPIILGADASVAQLNTVKTAYQDPA--------QSRFKFLMYNTVDPTQRHMYTRPAHISERLWNQAELDNPDPLNCAPVPILGFDNLLKRIKAQQEHAEKYNKYTDDLRAQLKEMDKHTRATEEKLEKCRHEHVQLFHALVKVMRDIELLQNYGKPLQREEMQLAMMLKKLQTLLDSPGQYKARLNDAVSL-QRVQKETQPPPSSLLSPQDLQRLYEFMDKQRQGLEHLTNMINDDLADIQLIK 468          
BLAST of mRNA_F-serratus_M_contig617.16967.1 vs. uniprot
Match: A0A485LQI1_9STRA (Aste57867_23878 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQI1_9STRA)

HSP 1 Score: 124 bits (312), Expect = 4.240e-28
Identity = 78/222 (35.14%), Postives = 122/222 (54.95%), Query Frame = 0
Query:  157 RMKHVVYNQVDPNLRYSYTRPAHIDEKAWKKAEEDNPDPSKLAPAAVIGWESLKERLVVQQ-------GEVEAMAKNVQYMRSTAGNGLRSVALLRTRMEASRRTHLAQAHRFLKIQSKLESIRFMNKPLIGEDRLLRMKLEKVQRSLDPPQQALKDLNAAL-LQGERMAEEVEEITDPEQLAN-----IFEALDGQRDGMEHLMRILKKDRQDLEIMKKQL 365
            R KH+ YN VDP  ++ YTRP H+ EK W +A+ DNPDP+   PAAV+G++ L  R+ +QQ       G    + K VQ M   +            ++   R+ H+A  HR +++  KLE  + + KPL  ++  L M L+ +Q  LD P Q    ++  + LQ  + A + ++  + +QL       +F  LD QR+G+EHL +IL +D +D++IMKK L
Sbjct:  269 RFKHMFYNAVDPAHKHLYTRPPHVGEKLWIQAQRDNPDPTNCVPAAVLGFKELATRIKLQQEHTQKFNGYAVDLVKQVQEMEKASRQ-------TDVKLAHCRQQHIALFHRLVQLMRKLEVFKQLRKPLAADEHRLAMTLKHIQGLLDNPTQFKAHMHELMTLQSMQEAVQSQQRAENQQLTEDDMVTVFRLLDKQREGLEHLTKILNQDLRDVQIMKKAL 483          
BLAST of mRNA_F-serratus_M_contig617.16967.1 vs. uniprot
Match: A0A5D6XFA2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XFA2_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.930e-27
Identity = 84/248 (33.87%), Postives = 128/248 (51.61%), Query Frame = 0
Query:  120 AAPATENVGA-ASTRELEKLYFSYAEKAVGSNAPNPDCRMKHVVYNQVDPNLRYSYTRPAHIDEKAWKKAEEDNPDPSKLAPAAVIGWESLKERLVVQQGEVEAMAKNVQYMRSTAGNGLRSVALLRTRMEASRRTHLAQAHRFLKIQSKLESIRFMNKPLIGEDRLLRMKLEKVQRSLDPPQQ---ALKDLNAAL-LQGERMAEEVEEITDPEQLANIFEALDGQRDGMEHLMRILKKDRQDLEIMK 362
            ++PA   VGA A+  +L  + ++Y + A          R K ++YN VDP  R+ YTRPAHI E+ W +AE DNPDP   APA V+G+  L +R+ VQQ       K    +R+       +      ++E  R  H+   H  +K+   +E ++   KPL   +  L M ++K+Q  LD P Q    LKD  A   +Q    A    +++ PE L  +++ LD QR G+EHL  IL  D  D++++K
Sbjct:  160 SSPAPIIVGADAAVAQLNTVKYAYMDPA--------QSRFKFLLYNAVDPTQRHLYTRPAHISERQWNQAELDNPDPLHFAPAPVVGFADLLKRVQVQQEHAAKYDKFTDDLRAQLQEMAAATRATEEKLEKCRHEHVQLFHTLVKVMKDIELLQNYGKPLQRNEMQLAMMMKKLQTLLDSPAQYKARLKDAVALQRIQDAAPAPPGNQLS-PEDLQRVYQFLDKQRQGLEHLTSILNDDLADIKLIK 398          
BLAST of mRNA_F-serratus_M_contig617.16967.1 vs. uniprot
Match: A0A067CQG4_SAPPC (Nup54 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQG4_SAPPC)

HSP 1 Score: 122 bits (306), Expect = 2.580e-27
Identity = 75/214 (35.05%), Postives = 118/214 (55.14%), Query Frame = 0
Query:  157 RMKHVVYNQVDPNLRYSYTRPAHIDEKAWKKAEEDNPDPSKLAPAAVIGWESLKERLVVQQGEVEAMAKNVQYMRSTAGNGLRSVALLRTRMEASRRTHLAQAHRFLKIQSKLESIRFMNKPLIGEDRLLRMKLEKVQRSLDPPQQALKDLNAAL----LQGERMAEEVEEITDPEQ-LANIFEALDGQRDGMEHLMRILKKDRQDLEIMKKQL 365
            R KH++YN VDP  ++ Y RPAHI EK W +A+ DNPDP+   PAAVIG++ L  R+ +QQ   +  A   + M +      ++      ++   R  H+A  HR +++  KLE  + + KPL  ++  L   L+KV   LD P Q    +N  +    +Q  +   + E+    EQ L  +F  +D QR G+EH+ ++L +D +D+EIM+K L
Sbjct:  260 RFKHMLYNAVDPAQKHLYVRPAHISEKLWTQAQRDNPDPANCVPAAVIGFKELSTRIKLQQEHADKFATYAEDMVTQVKEMEKTSRETDVKLAQCRHQHVALFHRLIQLMRKLEVFKNLRKPLHADEVKLLETLKKVASMLDNPTQFKARMNELMALQAMQAAKPHPDQEQCQLSEQDLHLVFGIMDRQRQGLEHVTKVLSQDMRDVEIMQKAL 473          
BLAST of mRNA_F-serratus_M_contig617.16967.1 vs. uniprot
Match: A0A6A3EYN4_9STRA (Nup54 domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3EYN4_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.640e-26
Identity = 79/249 (31.73%), Postives = 127/249 (51.00%), Query Frame = 0
Query:  119 AAAPATENVGA-ASTRELEKLYFSYAEKAVGSNAPNPDCRMKHVVYNQVDPNLRYSYTRPAHIDEKAWKKAEEDNPDPSKLAPAAVIGWESLKERLVVQQGEVEAMAKNVQYMRSTAGNGLRSVALLRTRMEASRRTHLAQAHRFLKIQSKLESIRFMNKPLIGEDRLLRMKLEKVQRSLDPPQQALKDLNAALLQGERMAEEVEEIT----DPEQLANIFEALDGQRDGMEHLMRILKKDRQDLEIMK 362
            + APA   +GA AS  +L  +  +Y + A          R K ++YN VDP  R+ Y RP HI E+ W +AE DNPDP    P  ++G+++L +R+  QQ   E   K    +R+      +       ++E  R  H+   H  +K+   +E ++   KPL  E+  L M L+K+Q  LD P Q    LN A+   +R+ +E + +      P+ L  ++E +D QR G+EHL  I+  D  D++++K
Sbjct:  264 STAPAPIILGADASVAQLNTVKAAYQDPA--------QSRFKFLMYNTVDPTQRHLYVRPPHISERLWNQAELDNPDPLNCTPVPILGFDNLLKRIKAQQEHAEKYNKYTDDLRAQLNEMDKHSRATEEKLEKCRHEHIQLFHALVKVMRDIELLQNYGKPLQREEMQLAMALKKLQTLLDSPGQYKARLNDAVSL-QRVQKEAQPLPTSQLSPQDLQRLYEFMDKQRQGLEHLSNIINDDLADMQLIK 503          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig617.16967.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHF5_ECTSI1.470e-10869.83Nup54 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A024TY86_9STRA1.630e-3036.89Nup54 domain-containing protein n=2 Tax=Aphanomyce... [more]
W4G2Y8_9STRA4.360e-2935.78Nup54 domain-containing protein n=1 Tax=Aphanomyce... [more]
A0A6G0XI91_9STRA1.120e-2834.55Nup54 domain-containing protein n=1 Tax=Aphanomyce... [more]
A0A329SUH9_9STRA3.560e-2832.53Nup54 domain-containing protein n=1 Tax=Phytophtho... [more]
V9EUL8_PHYPR3.650e-2832.79Nup54 domain-containing protein n=10 Tax=Phytophth... [more]
A0A485LQI1_9STRA4.240e-2835.14Aste57867_23878 protein n=1 Tax=Aphanomyces stella... [more]
A0A5D6XFA2_9STRA1.930e-2733.87Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A067CQG4_SAPPC2.580e-2735.05Nup54 domain-containing protein n=2 Tax=Saprolegni... [more]
A0A6A3EYN4_9STRA1.640e-2631.73Nup54 domain-containing protein n=5 Tax=Phytophtho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 304..324
NoneNo IPR availableCOILSCoilCoilcoord: 344..364
IPR025712Nucleoporin Nup54, alpha-helical domainPFAMPF13874Nup54coord: 176..309
e-value: 1.1E-23
score: 83.9
IPR024864Nucleoporin Nup54/Nup57/Nup44PANTHERPTHR13000NUCLEOPORIN P54coord: 1..366

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig617contigF-serratus_M_contig617:237304..264415 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig617.16967.1mRNA_F-serratus_M_contig617.16967.1Fucus serratus malemRNAF-serratus_M_contig617 236793..264589 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig617.16967.1 ID=prot_F-serratus_M_contig617.16967.1|Name=mRNA_F-serratus_M_contig617.16967.1|organism=Fucus serratus male|type=polypeptide|length=371bp
MAFAFGNSPAPATGFSFGTPAPAPASGFSFGGAPAPAVPSQASAFGGFGA
AGAPAPAPTTSAFGGGTSAFGAGTSTFGGSAPGFGVGTSTFGAATPGGGF
GSTATLQQQQLQNQQQLGAAAPATENVGAASTRELEKLYFSYAEKAVGSN
APNPDCRMKHVVYNQVDPNLRYSYTRPAHIDEKAWKKAEEDNPDPSKLAP
AAVIGWESLKERLVVQQGEVEAMAKNVQYMRSTAGNGLRSVALLRTRMEA
SRRTHLAQAHRFLKIQSKLESIRFMNKPLIGEDRLLRMKLEKVQRSLDPP
QQALKDLNAALLQGERMAEEVEEITDPEQLANIFEALDGQRDGMEHLMRI
LKKDRQDLEIMKKQLPALTQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025712Nup54_alpha-helical_dom
IPR024864Nup54/Nup57/Nup44