prot_F-serratus_M_contig1510.3538.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1510.3538.1
Unique Name	prot_F-serratus_M_contig1510.3538.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	279

Homology

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BLAST of mRNA_F-serratus_M_contig1510.3538.1 vs. uniprot
Match: A0A6H5K262_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K262_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 6.470e-16
Identity = 105/320 (32.81%), Postives = 143/320 (44.69%), Query Frame = 0

Query:    1 MTFAPRSAGGGWMEGGGRAVPGAV-AQAFVLEPAIDQLLKYEGYDFAHPMLVAPLRPIVAHEVSLAAMRQAEASKAWHGDQGNKDRPPNGKPQLLAPL------HPDSDR--QPASADLAIERDAADTNIHGKEGSRGGEKASRLASGTEVKGETEKKAGGIPP----TQTPQAASPDRRRAHFVVPFWKRTN--RSRVDG------------AKKENTALE-----GSSGAASAKGGLAGVAYRAGAMPGAPGEGDGGLKSN-SKRPRADG---------KVGGNNSNERPNKTSAVRYQFRAGYTNAVRRPVRMRDLM 278
            +TF+P+SA          A   A  AQ F LEPAIDQLLKYEGY+FAHP L  PLRP+VAHEV+L  MR+AEA+K  H +     +     P   A        HP + +  + + A  A  +  ++ + +G+                                     T    S + R AH  VPFW RTN    R DG            A K++ A++      S   +S        A +AG++  +  +G     +  SKR R +G         +  G+   + P     +RYQFRAGYTNAVRRPVRMRDL+
Sbjct:  764 LTFSPQSASSSSSASAPPAFGAATGAQEFALEPAIDQLLKYEGYEFAHPRLAPPLRPMVAHEVALEGMRKAEAAKLSHREDAAFAKNEASDPFAAASSATRGTGHPFTTKAGKSSGAQAASGKSTSEADENGRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTKFRDSENDRPAH-PVPFWNRTNWISGRKDGTGSRRDAGDDAAAVKQSAAIDFTHDTKSPSKSSVNKLCETPAVQAGSISCSATDGHQATAAERSKRVRHEGVARRGTVEDEEAGSGKGKIP-----IRYQFRAGYTNAVRRPVRMRDLL 1077

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1510.3538.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1510.3538.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5K262_9PHAE	6.470e-16	32.81	AAA domain-containing protein n=2 Tax=Ectocarpus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23389	CHROMOSOME TRANSMISSION FIDELITY FACTOR 18	coord: 27..278
None	No IPR available	PANTHER	PTHR23389:SF3	CHROMOSOME TRANSMISSION FIDELITY PROTEIN 18 HOMOLOG	coord: 27..278

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1510	contig	F-serratus_M_contig1510:172166..173807 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1510.3538.1	mRNA_F-serratus_M_contig1510.3538.1	Fucus serratus male	mRNA	F-serratus_M_contig1510 172090..174501 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1510.3538.1 ID=prot_F-serratus_M_contig1510.3538.1|Name=mRNA_F-serratus_M_contig1510.3538.1|organism=Fucus serratus male|type=polypeptide|length=279bp
MTFAPRSAGGGWMEGGGRAVPGAVAQAFVLEPAIDQLLKYEGYDFAHPML
VAPLRPIVAHEVSLAAMRQAEASKAWHGDQGNKDRPPNGKPQLLAPLHPD
SDRQPASADLAIERDAADTNIHGKEGSRGGEKASRLASGTEVKGETEKKA
GGIPPTQTPQAASPDRRRAHFVVPFWKRTNRSRVDGAKKENTALEGSSGA
ASAKGGLAGVAYRAGAMPGAPGEGDGGLKSNSKRPRADGKVGGNNSNERP
NKTSAVRYQFRAGYTNAVRRPVRMRDLM*