prot_F-serratus_M_contig1510.3537.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1510.3537.1
Unique Nameprot_F-serratus_M_contig1510.3537.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length147
Homology
BLAST of mRNA_F-serratus_M_contig1510.3537.1 vs. uniprot
Match: A0A6H5K262_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K262_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 6.240e-70
Identity = 113/146 (77.40%), Postives = 130/146 (89.04%), Query Frame = 0
Query:    2 NRSEPDLLEEVEGFNDHGKVVAGVHENFLGVRFNDPTLSKASAAVDWLAMADLMDARTNRSQDYSFCRYLPLAAAGVHYLCRSDQRAVVSQPKKDYEARTARSAKRNILHSFVDGRQLTATARTAESVALDMLSHLMDILAPTLRP 147
            +R + D+ EEV+ FNDH KV+AGVHENFLGVRFNDPTLSKA+AA+DWL MADLMD RTN++QDYSF RY P+AAAGVH+LCRSDQR+ V+QPKKDYEARTAR+AK NILHSF DGRQL AT RT +++ LDMLSHLMDILAPTLRP
Sbjct:  593 DRKDADVFEEVQAFNDHSKVLAGVHENFLGVRFNDPTLSKAAAAMDWLEMADLMDTRTNQTQDYSFSRYAPVAAAGVHFLCRSDQRSTVTQPKKDYEARTARAAKSNILHSFADGRQLGATGRTTQALVLDMLSHLMDILAPTLRP 738          
BLAST of mRNA_F-serratus_M_contig1510.3537.1 vs. uniprot
Match: A0A4D9CU49_9STRA (AAA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU49_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.380e-20
Identity = 56/141 (39.72%), Postives = 82/141 (58.16%), Query Frame = 0
Query:    8 LLEEVEGFNDHGKVVAGVHENFLGVRFNDPTLSKASAAVDWLAMADLMDARTNRSQDYSFCRYLPLAAAGVHYLCRSDQRAVVSQPKKDYEARTARSAKRNILHSFVDGRQLTAT-ARTAESVALDMLSHLMDILAPTLRP 147
            ++  V  ++DH  V+    EN+  +RF DP L+K   A +WLA +DL+  R           +L  AAA +H LCR + R  ++ P+KD+E R+AR ++++IL SF +G  L A  AR    V LD++S LM IL P LRP
Sbjct:  739 VMASVASYSDHAHVLLAAQENYCQLRFTDPNLTKVLHAAEWLAFSDLVQGRQMEGHHVMEDLHLATAAA-LHLLCRVETRPRLALPRKDHEYRSARLSRQHILQSFGEGCSLQAMWARRPTPVVLDVVSPLMHILNPNLRP 878          
BLAST of mRNA_F-serratus_M_contig1510.3537.1 vs. uniprot
Match: W7TIW5_9STRA (Chromosome transmission fidelity n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIW5_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.790e-20
Identity = 56/141 (39.72%), Postives = 84/141 (59.57%), Query Frame = 0
Query:    8 LLEEVEGFNDHGKVVAGVHENFLGVRFNDPTLSKASAAVDWLAMADLMDARTNRSQDYSFCRYLPLAAAGVHYLCRSDQRAVVSQPKKDYEARTARSAKRNILHSFVDGRQLTAT-ARTAESVALDMLSHLMDILAPTLRP 147
            ++  V  ++DH  V+    EN+  +RF DP+L+K   A +WLA +DL+  R           +L  AAA +H LCR + R  ++ P+KD+E R+AR ++++IL SF +G  L A  AR    V LD++S LM IL P+LRP
Sbjct:  338 VMTSVASYSDHAHVLLAAQENYCQLRFTDPSLTKVLHAAEWLAFSDLVHGRQMEGLHVMEDLHLATAAA-LHLLCRVETRPRLALPRKDHEYRSARLSRQHILQSFGEGCSLQALWARRPTPVVLDVVSPLMHILNPSLRP 477          
BLAST of mRNA_F-serratus_M_contig1510.3537.1 vs. uniprot
Match: A0A8C6RTR0_NANGA (Chromosome transmission fidelity factor 18 n=2 Tax=Nannospalax galili TaxID=1026970 RepID=A0A8C6RTR0_NANGA)

HSP 1 Score: 92.4 bits (228), Expect = 5.590e-19
Identity = 51/141 (36.17%), Postives = 74/141 (52.48%), Query Frame = 0
Query:    8 LLEEVEGFNDHGKVVAGVHENFLGVRFNDPTLSKASAAVDWLAMADLMDARTNRSQDYSFCRYLPLAAAGVHYLCRSDQRAVVSQPKKDYEARTARSAKRNILHSFVDGRQLTATAR-TAESVALDMLSHLMDILAPTLRP 147
            +L       +H KVV G+ +NFL +R  D +L     A+DWLA  DL++   +RSQ +   RYLP   A  H L  S     +  P    EA+T  +  RN + + V G   T  ++ T +++ LD L  L+D+LAP LRP
Sbjct:  629 ILHVTTSAGEHEKVVQGLFDNFLRLRLRDSSLGTVCCALDWLAFDDLLEQAAHRSQSFQLLRYLPFLPAAFHVLFASSHVPRILFPSSQQEAQTRMNQTRNQIQTLVSGMAPTTRSQATPQTLVLDTLCLLLDVLAPKLRP 769          
BLAST of mRNA_F-serratus_M_contig1510.3537.1 vs. uniprot
Match: A0A4X2LD57_VOMUR (Chromosome transmission fidelity factor 18 n=5 Tax=Metatheria TaxID=9263 RepID=A0A4X2LD57_VOMUR)

HSP 1 Score: 92.0 bits (227), Expect = 7.660e-19
Identity = 46/132 (34.85%), Postives = 72/132 (54.55%), Query Frame = 0
Query:   17 DHGKVVAGVHENFLGVRFNDPTLSKASAAVDWLAMADLMDARTNRSQDYSFCRYLPLAAAGVHYLCRSDQRAVVSQPKKDYEARTARSAKRNILHSFVDGRQLTATARTA-ESVALDMLSHLMDILAPTLRP 147
            DH KV  G+++NFL ++  DPTL+    A+DWL   D++D      Q++   RYLP      H L  ++    +S P   +EA    +  +N++ S V G    A +R A +S+ L+ L  L+DI++P LRP
Sbjct:  687 DHEKVAQGLYDNFLNMKLKDPTLNSVCTAMDWLIFEDILDQTVRHGQNFQLMRYLPFLPVAFHLLFAANSVPRISYPNSQHEALNKMNQTQNLIMSLVSGVTPAARSRAAPQSLVLEALCLLLDIISPKLRP 818          
BLAST of mRNA_F-serratus_M_contig1510.3537.1 vs. uniprot
Match: G3WKJ1_SARHA (Chromosome transmission fidelity factor 18 n=3 Tax=Sarcophilus harrisii TaxID=9305 RepID=G3WKJ1_SARHA)

HSP 1 Score: 91.7 bits (226), Expect = 1.040e-18
Identity = 46/132 (34.85%), Postives = 72/132 (54.55%), Query Frame = 0
Query:   17 DHGKVVAGVHENFLGVRFNDPTLSKASAAVDWLAMADLMDARTNRSQDYSFCRYLPLAAAGVHYLCRSDQRAVVSQPKKDYEARTARSAKRNILHSFVDGRQLTATARTA-ESVALDMLSHLMDILAPTLRP 147
            DH KV  G+++NFL ++  DPTL+   AA+DWL   D++D      Q++   RYLP      H L  ++    +S P   +EA    +  +N++ S V G    A +R   +S+ L+ L  L+DI++P LRP
Sbjct:  686 DHEKVAQGLYDNFLNMKLKDPTLNSVCAAMDWLIFEDILDQTVRHGQNFQLMRYLPFLPVAFHLLFAANSIPRISYPNSQHEALNKMNQTQNLIMSLVSGVTPAARSRAGPQSLILEALCLLLDIISPKLRP 817          
BLAST of mRNA_F-serratus_M_contig1510.3537.1 vs. uniprot
Match: H0VG48_CAVPO (Chromosome transmission fidelity factor 18 n=4 Tax=Cavia porcellus TaxID=10141 RepID=H0VG48_CAVPO)

HSP 1 Score: 90.5 bits (223), Expect = 2.640e-18
Identity = 49/141 (34.75%), Postives = 74/141 (52.48%), Query Frame = 0
Query:    8 LLEEVEGFNDHGKVVAGVHENFLGVRFNDPTLSKASAAVDWLAMADLMDARTNRSQDYSFCRYLPLAAAGVHYLCRSDQRAVVSQPKKDYEARTARSAKRNILHSFVDG-RQLTATARTAESVALDMLSHLMDILAPTLRP 147
            +L+      +H KVV G+ +NFL +R  D +L     A+DWLA  DL++   +  Q +   RYLP   A  H L  S     ++ P    EA+   S  RN++ + V G   +T +  T +++ LD L  L+DILAP +RP
Sbjct:  649 ILQVTTSAGEHEKVVQGLFDNFLRLRLRDSSLGSVCMALDWLAFDDLVERAAHHGQSFQLLRYLPFLPAAFHMLFASSHVPRIAFPSSQQEAQNRISQMRNLIQTLVSGITPVTRSRATPQTLILDTLCLLLDILAPKMRP 789          
BLAST of mRNA_F-serratus_M_contig1510.3537.1 vs. uniprot
Match: F6XJ59_MONDO (Chromosome transmission fidelity factor 18 n=6 Tax=Didelphinae TaxID=126287 RepID=F6XJ59_MONDO)

HSP 1 Score: 87.0 bits (214), Expect = 4.210e-17
Identity = 44/132 (33.33%), Postives = 70/132 (53.03%), Query Frame = 0
Query:   17 DHGKVVAGVHENFLGVRFNDPTLSKASAAVDWLAMADLMDARTNRSQDYSFCRYLPLAAAGVHYLCRSDQRAVVSQPKKDYEARTARSAKRNILHSFVDGRQLTATARTA-ESVALDMLSHLMDILAPTLRP 147
            DH KV  G+++NFL ++  D TL+    A+DWL   D++D      Q++   RY P      H L  ++    +S P   +EA    +  +N++ S V G    A +R A +S+ L+ L  L+DI++P LRP
Sbjct:  513 DHEKVAQGLYDNFLNMKLKDSTLNSVCTAMDWLIFEDILDQAVRHGQNFQLMRYFPFLPVAFHLLFAANSVPRISYPNSQHEALNKTNQTQNLIMSLVSGVTPAARSRAAPQSLILEALCLLLDIISPKLRP 644          
BLAST of mRNA_F-serratus_M_contig1510.3537.1 vs. uniprot
Match: UPI001EAEB601 (chromosome transmission fidelity protein 18 homolog n=1 Tax=Oncorhynchus gorbuscha TaxID=8017 RepID=UPI001EAEB601)

HSP 1 Score: 84.7 bits (208), Expect = 5.820e-17
Identity = 47/141 (33.33%), Postives = 72/141 (51.06%), Query Frame = 0
Query:    8 LLEEVEGFNDHGKVVAGVHENFLGVRFNDPTLSKASAAVDWLAMADLMDARTNRSQDYSFCRYLPLAAAGVHYLCRSDQRAVVSQPKKDYEARTARSAKRNILHSFVDGRQLTATARTAE-SVALDMLSHLMDILAPTLRP 147
            +L       +H K+  G+++NFL +R  D  L +   A+DWL  +D +     + Q++S  RY P   A  H+L        ++ P   YEA T  SA RN L + +         R +E S++LD+LS L+DI+ P LRP
Sbjct:   50 ILHLASSTGEHDKLTQGLYDNFLSMRVKDHDLGRVCQALDWLGFSDGLTQAMLQGQNFSLLRYQPFLPAAFHFLFAHTHVPRINYPHSQYEALTKTSASRNALAAMLSEVPACIRTRVSELSLSLDILSLLLDIICPKLRP 190          
BLAST of mRNA_F-serratus_M_contig1510.3537.1 vs. uniprot
Match: A0A2K6EZA4_PROCO (Chromosome transmission fidelity factor 18 n=8 Tax=Lemuriformes TaxID=376915 RepID=A0A2K6EZA4_PROCO)

HSP 1 Score: 86.7 bits (213), Expect = 5.840e-17
Identity = 48/132 (36.36%), Postives = 68/132 (51.52%), Query Frame = 0
Query:   17 DHGKVVAGVHENFLGVRFNDPTLSKASAAVDWLAMADLMDARTNRSQDYSFCRYLPLAAAGVHYLCRSDQRAVVSQPKKDYEARTARSAKRNILHSFVDGRQLTATARTA-ESVALDMLSHLMDILAPTLRP 147
            +H KVV G+ +NFL +R  D +L    +A+DWLA  DL+    +  Q +   RYLP      H L        +S P    EA+   S  RN++ + V G      ++ A +S+ LD L  L+DILAP LRP
Sbjct:  668 EHEKVVQGLFDNFLRLRLRDSSLGAVCSALDWLAFDDLLGQAAHHGQSFQLLRYLPFLPVAFHVLFARSHVPRISFPSSQQEAQNRISQTRNLIQTLVSGMAPATRSQAAPQSLVLDALCLLLDILAPKLRP 799          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1510.3537.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K262_9PHAE6.240e-7077.40AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A4D9CU49_9STRA1.380e-2039.72AAA domain-containing protein n=1 Tax=Nannochlorop... [more]
W7TIW5_9STRA1.790e-2039.72Chromosome transmission fidelity n=2 Tax=Nannochlo... [more]
A0A8C6RTR0_NANGA5.590e-1936.17Chromosome transmission fidelity factor 18 n=2 Tax... [more]
A0A4X2LD57_VOMUR7.660e-1934.85Chromosome transmission fidelity factor 18 n=5 Tax... [more]
G3WKJ1_SARHA1.040e-1834.85Chromosome transmission fidelity factor 18 n=3 Tax... [more]
H0VG48_CAVPO2.640e-1834.75Chromosome transmission fidelity factor 18 n=4 Tax... [more]
F6XJ59_MONDO4.210e-1733.33Chromosome transmission fidelity factor 18 n=6 Tax... [more]
UPI001EAEB6015.820e-1733.33chromosome transmission fidelity protein 18 homolo... [more]
A0A2K6EZA4_PROCO5.840e-1736.36Chromosome transmission fidelity factor 18 n=8 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23389CHROMOSOME TRANSMISSION FIDELITY FACTOR 18coord: 8..147
NoneNo IPR availablePANTHERPTHR23389:SF3CHROMOSOME TRANSMISSION FIDELITY PROTEIN 18 HOMOLOGcoord: 8..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1510contigF-serratus_M_contig1510:170212..171620 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1510.3537.1mRNA_F-serratus_M_contig1510.3537.1Fucus serratus malemRNAF-serratus_M_contig1510 170189..171620 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1510.3537.1 ID=prot_F-serratus_M_contig1510.3537.1|Name=mRNA_F-serratus_M_contig1510.3537.1|organism=Fucus serratus male|type=polypeptide|length=147bp
MNRSEPDLLEEVEGFNDHGKVVAGVHENFLGVRFNDPTLSKASAAVDWLA
MADLMDARTNRSQDYSFCRYLPLAAAGVHYLCRSDQRAVVSQPKKDYEAR
TARSAKRNILHSFVDGRQLTATARTAESVALDMLSHLMDILAPTLRP
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