prot_F-serratus_M_contig1489.3348.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1489.3348.1
Unique Nameprot_F-serratus_M_contig1489.3348.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length293
Homology
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BLAST of mRNA_F-serratus_M_contig1489.3348.1 vs. uniprot
Match: A0A7S3BQ95_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BQ95_9EUKA)

HSP 1 Score: 58.9 bits (141), Expect = 9.280e-7
Identity = 35/112 (31.25%), Postives = 61/112 (54.46%), Query Frame = 0 
Query:   98 CPRDGGVWARFMMVSVSMIYFARLSLASL------AHKERCPKDFDDYKMPKWWAFYRPLDNVVTSLLYDTFIFLSNLLIVFQDRGVNDMVVDVLALEFFTMIDDEFKTALL 203
            CP D  ++ + +M+ +S++Y ARL +ASL       H +R       Y        Y   D V+   +++  ++L NL +VF+     +MV+++LALEF   ID+EFK++ +
Sbjct:   22 CPADADIFTKVIMLCISVMYVARLRVASLDFAEASKHMKRSGSGVTSYTSVL--GVYTMFDLVIMQGVFEASVYLFNLYLVFKTPEPLEMVLNMLALEFIVKIDNEFKSSFM 131
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1489.3348.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S3BQ95_9EUKA9.280e-731.25Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..64
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 89..107
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 128..292
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 108..127
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 65..88
NoneNo IPR availableTMHMMTMhelixcoord: 102..124
NoneNo IPR availableTMHMMTMhelixcoord: 269..291
NoneNo IPR availableTMHMMTMhelixcoord: 65..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1489contigF-serratus_M_contig1489:205725..213931 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1489.3348.1mRNA_F-serratus_M_contig1489.3348.1Fucus serratus malemRNAF-serratus_M_contig1489 205594..214433 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1489.3348.1 ID=prot_F-serratus_M_contig1489.3348.1|Name=mRNA_F-serratus_M_contig1489.3348.1|organism=Fucus serratus male|type=polypeptide|length=293bp
MTNLYASSFRRKNATVEPETAPAFRADGLGPAELNSLKSLISEYKGFGLL
SLIRALMFSGDCRDFMLSLMGLALLIGQWVGPIGFIAFKLRSEDVTECPR
DGGVWARFMMVSVSMIYFARLSLASLAHKERCPKDFDDYKMPKWWAFYRP
LDNVVTSLLYDTFIFLSNLLIVFQDRGVNDMVVDVLALEFFTMIDDEFKT
ALLDYDSDFLFNMVSSAPATEMSGPQRFSGGLEHVAEDAEKKKCRDTVQD
IARVTILAVTSVIRLICRIGGPLCAFVMIFYGPYCLGTPALD*
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