prot_F-serratus_M_contig148.3318.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig148.3318.1
Unique Nameprot_F-serratus_M_contig148.3318.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length200
Homology
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BLAST of mRNA_F-serratus_M_contig148.3318.1 vs. uniprot
Match: D7FRY6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRY6_ECTSI)

HSP 1 Score: 224 bits (570), Expect = 2.140e-71
Identity = 131/204 (64.22%), Postives = 150/204 (73.53%), Query Frame = 0 
Query:    1 MAPACWCLLLTFALLLL--SKSIDAFFRPRIVL-NGRHSNTPIMNKFTCVMSVPVERRPFATQLSQGILG--VLGLGVASERVQAYEKEYLSDPTPEFKAMEAKQSEFANAQRAYKNEFVKQLDAFLAVKTDDDAVDTLNTMSRTVVQRGGLPESVRINDLLKTCRKKKAEMKGSGKWSTPVQIAYETLVQVTNRSVIPLQSGS 199
            MAP  +  L+  AL LL   K  DAF  PR  L   R     IM     VMS    RR F +    G +G  VLGLG+A+ER  AYEKEYL +PT EFKAMEA+Q++F+ AQRAYK EFVK+LDAFLAV+TD++AV TLN MS TV+QRGGLPESVRINDLLKTCR+KKA MK SGKWSTPVQIAYETLVQ TNR+V+PLQSGS
Sbjct:    1 MAPVSYITLVVSALTLLLPRKGADAFVHPRPALPRSRQQQQSIM-----VMSA--TRRAFLSDQLVGAIGAGVLGLGLATERATAYEKEYLKEPTAEFKAMEARQADFSAAQRAYKQEFVKKLDAFLAVETDEEAVSTLNAMSNTVIQRGGLPESVRINDLLKTCRRKKAAMKDSGKWSTPVQIAYETLVQTTNRTVVPLQSGS 197
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BLAST of mRNA_F-serratus_M_contig148.3318.1 vs. uniprot
Match: A0A7R9U2W1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2W1_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 7.770e-11
Identity = 40/116 (34.48%), Postives = 61/116 (52.59%), Query Frame = 0 
Query:   80 AYEKEYLSDPTPEFKAMEAKQSEFANAQRAYKNEFVKQLDAFLAVKTDDDAVDTLNTMSRTVVQRGGLPESVRINDLLKTCRKKKAEMKGSGKWSTPVQIAYETLVQVTNRSVIPL 195
            AYEK  +++PTP ++  EA+ + F   QR     F    DAF +   +    D L +M++ VVQ+GGLP  +    ++   R KKA+M  +G W T  ++AY  L     R  +PL
Sbjct:   51 AYEK--VAEPTPAWEEAEAQAAAFRKKQRELAKTFNAFFDAFTSATNEKIMQDNLQSMTKFVVQQGGLPSGITAKQVISGVRSKKADMSRAGGWETETEMAYLDLTLQMRRLSLPL 164
[Close]
BLAST of mRNA_F-serratus_M_contig148.3318.1 vs. uniprot
Match: A0A7S1CXS8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CXS8_CYCTE)

HSP 1 Score: 66.2 bits (160), Expect = 4.650e-10
Identity = 42/103 (40.78%), Postives = 59/103 (57.28%), Query Frame = 0 
Query:   85 YLSDPTPEFKAMEAKQSEFANAQRAYKNEFVKQLDAFLAV-KTDDDAVDTLNTMSRTVVQRGGLPESVRINDLLKTCRKKKAEMKGSGKWSTPVQIAYETLVQ 186
            +L++PT EFKA EAK  EF  AQ A K +FV  +D      KT+   V  LN +   V+   GLP  ++  +L KT R+KKA+    G W T V+ AY+ L++
Sbjct:   73 WLTEPTEEFKANEAKSMEFKRAQLAQKAKFVTVIDRLSTESKTEAALVGDLNELQDLVIATRGLPLGIKKEELYKTIRRKKAQ----GFWPTAVEYAYQALIR 171
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig148.3318.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FRY6_ECTSI2.140e-7164.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9U2W1_9STRA7.770e-1134.48Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1CXS8_CYCTE4.650e-1040.78Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..199
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.875

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig148contigF-serratus_M_contig148:639937..651429 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig148.3318.1mRNA_F-serratus_M_contig148.3318.1Fucus serratus malemRNAF-serratus_M_contig148 639891..652566 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig148.3318.1 ID=prot_F-serratus_M_contig148.3318.1|Name=mRNA_F-serratus_M_contig148.3318.1|organism=Fucus serratus male|type=polypeptide|length=200bp
MAPACWCLLLTFALLLLSKSIDAFFRPRIVLNGRHSNTPIMNKFTCVMSV
PVERRPFATQLSQGILGVLGLGVASERVQAYEKEYLSDPTPEFKAMEAKQ
SEFANAQRAYKNEFVKQLDAFLAVKTDDDAVDTLNTMSRTVVQRGGLPES
VRINDLLKTCRKKKAEMKGSGKWSTPVQIAYETLVQVTNRSVIPLQSGS*
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