prot_F-serratus_M_contig1477.3297.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1477.3297.1
Unique Nameprot_F-serratus_M_contig1477.3297.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length444
Homology
BLAST of mRNA_F-serratus_M_contig1477.3297.1 vs. uniprot
Match: D8LDC7_ECTSI (Plastid lipid associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDC7_ECTSI)

HSP 1 Score: 287 bits (734), Expect = 4.980e-89
Identity = 166/262 (63.36%), Postives = 202/262 (77.10%), Query Frame = 0
Query:  112 RSLAPRRSSVGSSNSDAAPVNV-VYPVADDPRLAGGXXXXXXXXXMGKTSGGAGDSDTRSSLKRKLLRKVATLNRGFIAKKADRVDIEEIVEMLELENPNPGACAGFETQSSPIAGRWQLLYTSSLDVLSLQLNPTITIGQIFQQIESDGRGIQNMIELQPPFAAVTNRILGSSVATVTVKLETEPVTDTRINLKFVRTEIKADSLFGRNLDLPTLGVDIPSSDKLRRVLNKG----------KAKMEDTKEKARDLTKKVK 362
            R + P   + G   S   P  V V     DP  AGG XXXXXXX         GD+ TR++LK+KLLRKVATLNRGF+A++ DR+D+EEI+EMLE+ENPNP +C GFET SSP+AGRWQLLYT+SLDVLSLQ+NP +T+G+IFQQIESDGR IQN+IELQPPFAAV N+ILGSS+ T+TVKLETEPV+D+RINLKFVRTEIKA+SLFGR LDLPTLGVDIPS+++L +++ KG          K K+E  K KAR L +K+K
Sbjct:   92 RGVGPLLMTSGDGESGPGPAAVPVDAELSDPAAAGGGXXXXXXXDA------VGDAATRAALKQKLLRKVATLNRGFVAEELDRLDVEEIIEMLEMENPNPKSCEGFETGSSPLAGRWQLLYTTSLDVLSLQINPAVTVGKIFQQIESDGRSIQNIIELQPPFAAV-NKILGSSMTTLTVKLETEPVSDSRINLKFVRTEIKANSLFGRELDLPTLGVDIPSAERLEKLIPKGGGSSGGGKALKEKVEGAKTKARQLAEKLK 346          
BLAST of mRNA_F-serratus_M_contig1477.3297.1 vs. uniprot
Match: A0A6H5K952_9PHAE (PAP_fibrillin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K952_9PHAE)

HSP 1 Score: 267 bits (683), Expect = 7.740e-82
Identity = 160/304 (52.63%), Postives = 196/304 (64.47%), Query Frame = 0
Query:  112 RSLAPRRSSVGSSNSDAAPVNV-VYPVADDPRLAGGXXXXXXXXXMGKTSGGAGDSDTRSSLKRKLLRKVATLNRGFIAKKADRVDIEEIVEMLELENPNPGACAGFETQSSPIAGRWQLLYTSSLDVLSLQLNPTITIGQIFQQIESDGRGIQNMIELQPPFAAVTNRILGSSVATVT------------------------------------------VKLETEPVTDTRINLKFVRTEIKADSLFGRNLDLPTLGVDIPSSDKLRRVLNKG----------KAKMEDTKEKARDLTKKVK 362
            R + P   + G   S   P  V V     +P  AGG          G T    GD  TR++LK+KLLRKVATLNRGF+A+++DR+D+EEI+EMLE+ENPNP +C GFET SSP+AGRWQLLYT+SLDVLSLQ+NP +T+G+IFQQIESDGR IQN+IELQPPFAAV N+ILGSS+ T+T                                          VKLETEPV+D+RINLKFVRTEIKA+SLFGR LDLPTLGV+IPS + L +++ KG          K K ED K KAR+L +K+K
Sbjct:   16 RGVGPLFMTSGDGQSGPGPAAVPVDAELSEPAAAGGGARE------GGTEDAVGDPATRAALKQKLLRKVATLNRGFVAEESDRLDVEEIIEMLEMENPNPKSCEGFETGSSPLAGRWQLLYTTSLDVLSLQINPAVTVGKIFQQIESDGRSIQNIIELQPPFAAV-NKILGSSMTTLTARTTFSFCAIFCVVERCTPSGVRLACDHGRRPRQLDQYGHEKVKLETEPVSDSRINLKFVRTEIKANSLFGRELDLPTLGVNIPSVESLEKLIPKGGGSSGGGKALKEKAEDAKTKARELVEKLK 312          
BLAST of mRNA_F-serratus_M_contig1477.3297.1 vs. uniprot
Match: R7Q658_CHOCR (PAP_fibrillin domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q658_CHOCR)

HSP 1 Score: 98.2 bits (243), Expect = 2.340e-19
Identity = 87/261 (33.33%), Postives = 124/261 (47.51%), Query Frame = 0
Query:   76 PLRREEFHMGWGFPTESRQRGRVVGALEGMRRPHQ--ERSLAPRRSSVGSSNSDAAPVNVVYPVADDPRLAGGXXXXXXXXXMGKTSGGAGDSDTR----SSLKRKLLRKVATLNRGFIAKKADRVDIEEIVEMLELENPNPGACAGFETQSSPIAGRWQLLYTSSLDVLSLQL-NPTITIGQIFQQIES---DGRG-----IQNMIELQPPFAAVTNRILGSSVATVTVKLETEPVTDTRINLKFVRTEIKADSLFGRNL 321
            PL R   H    F   S +R R V       RP    +   +P   S   + SD+AP +V     D P  A                    D+ TR    S LK  L   V++ NRG  A   DR +I  +V  LE   P P A A        + GRW+LL+T++LDVLSL L  P   +GQIFQ I     +G+G     I+N+++L+P FA V+N + G S+ ++TV  E    +D+R+++ FV+  IK + +FG  L
Sbjct:    8 PLIRRSRHDPVSF---SPRRRRPVXXXXXXXRPRMTYQPDPSPYSKSDFGNGSDSAPSDVELEAVDVPASAV-------------------DAQTRAVPISDLKCSLYAAVSSTNRGLTASADDRANILSLVAELERAKP-PTAPAD---DPGMLCGRWRLLFTNALDVLSLGLLAPVAQVGQIFQNIYEVPLEGKGDYDYDIENVVQLEPAFAPVSNVLGGQSITSITVSAEGRKTSDSRVDITFVQNAIKQEKIFGMQL 242          
BLAST of mRNA_F-serratus_M_contig1477.3297.1 vs. uniprot
Match: A0A5J4YK43_PORPP (Plastid lipid-associated protein 1, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YK43_PORPP)

HSP 1 Score: 79.3 bits (194), Expect = 1.960e-12
Identity = 59/174 (33.91%), Postives = 91/174 (52.30%), Query Frame = 0
Query:  172 LKRKLLRKVATLNRGFIAKKADRVDIEEIVEMLELENPNPGACAGFETQSSPI-----AGRWQLLYTSSLDVLSLQL-NPTITIGQIFQQIESDGRGIQ------NMIELQPPFAAVTNRI-LGSSVATVTVKLETE--PVTDTRINLKFVRTEIKADSLFGRNLDLPTLGVDI 330
            LK++ +   A  NRGF A  A +  I +++E LE  +          T ++P+      G W L+YT+SLDVLSL L  P   +G+IFQ +E    G Q      N++EL+PPF  V + + LG + + + V+ E       D  +NL+F+R+ + A S+ G  L LP L   +
Sbjct:   90 LKQRFVLATADTNRGFAADAARQKVIMQMIEELEARS----------TSATPLDDALFLGEWSLIYTNSLDVLSLGLLAPVAGLGRIFQNVERAATGAQHEFDIFNIVELEPPFQVVLSPLGLGPTRSVLRVEAEGSRGDQDDQLLNLRFMRSNLTAASIAGMKLQLPKLSASL 253          
BLAST of mRNA_F-serratus_M_contig1477.3297.1 vs. uniprot
Match: UPI001FF0EE99 (PAP/fibrillin family protein n=1 Tax=Synechococcus sp. C9 TaxID=102119 RepID=UPI001FF0EE99)

HSP 1 Score: 75.9 bits (185), Expect = 2.460e-12
Identity = 37/96 (38.54%), Postives = 58/96 (60.42%), Query Frame = 0
Query:  175 KLLRKVATLNRGFIAKKADRVDIEEIVEMLELENPNPGACAGFETQSSPIAGRWQLLYTSSLDVLSLQLNPTITIGQIFQQIESDGRGIQNMIELQ 270
            KLL+ VA  NRG +A    + ++++++  LE  NP P      E     ++G WQLLYT+S+DV+ L   P +T+GQI+Q I++D   + N+ E Q
Sbjct:    6 KLLKAVAVTNRGLLASPRSQAELDQLIRQLEAHNPTPNPAQAPEL----LSGCWQLLYTTSVDVIGLGRVPGVTLGQIYQVIQADKNRVYNLAEAQ 97          
BLAST of mRNA_F-serratus_M_contig1477.3297.1 vs. uniprot
Match: UPI001A00F769 (PAP/fibrillin family protein n=1 Tax=Pleurocapsales cyanobacterium LEGE 06147 TaxID=1828827 RepID=UPI001A00F769)

HSP 1 Score: 67.4 bits (163), Expect = 2.270e-9
Identity = 49/148 (33.11%), Postives = 75/148 (50.68%), Query Frame = 0
Query:  171 SLKRKLLRKVATLNRGFIAKKADRVDIEEIVEMLELENPNPGACAGFETQSSPIAGRWQLLYTSSLDVLSLQLNPTITIGQIFQQIESDGRGIQNMIE-LQPPFAAVTNRILGSSVATVTVKLETEPVTDTRINLKFVRTEIKADSLF 317
            S K +LL  +A  NRG +A + D V +   ++ LE  NP P     FE +   + G W+LLYT+S  +L L   P   +GQI+Q I +    + N+ E +  PF           + +V  K E  PV+++R+N+KF R+ I     F
Sbjct:    2 SKKAELLEAIAGTNRGLLATEIDNVRVLSAIQQLEDYNPTPKP---FEAKEL-LEGNWRLLYTTSKGILGLDRFPLFKLGQIYQCIRTAEATLYNIAEVIGLPFL--------EGIVSVVAKFE--PVSESRVNVKFERSIIGLQRFF 135          
BLAST of mRNA_F-serratus_M_contig1477.3297.1 vs. uniprot
Match: A0A1J0AEG1_9CYAN (PAP fibrillin family protein n=1 Tax=Gloeomargarita lithophora Alchichica-D10 TaxID=1188229 RepID=A0A1J0AEG1_9CYAN)

HSP 1 Score: 67.0 bits (162), Expect = 2.860e-9
Identity = 35/98 (35.71%), Postives = 56/98 (57.14%), Query Frame = 0
Query:  173 KRKLLRKVATLNRGFIAKKADRVDIEEIVEMLELENPNPGACAGFETQSSPIAGRWQLLYTSSLDVLSLQLNPTITIGQIFQQIESDGRGIQNMIELQ 270
            K KLL+ VA  NRG +     + ++++++  LE  NP        E     + G WQLLYT+S+DVL L   P +T+GQ++Q I+++   + N+ E Q
Sbjct:    4 KLKLLKAVAVTNRGLLTSPRVQAELDQLIRQLEAHNPTLNPAQAPEL----LGGCWQLLYTTSVDVLGLGRVPGVTLGQVYQIIQAEKGRVYNLAEAQ 97          
BLAST of mRNA_F-serratus_M_contig1477.3297.1 vs. uniprot
Match: A0A7S0G8T1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G8T1_9RHOD)

HSP 1 Score: 67.0 bits (162), Expect = 4.820e-9
Identity = 60/182 (32.97%), Postives = 85/182 (46.70%), Query Frame = 0
Query:  164 GDSDTRSSLKRKLLRKVATLNRGFIAKKADRVDIEEIVEMLELENPNPGACAGFETQSSPIAGRWQLLYTSSL-----DVLSLQLNPTITIGQIFQQIESDGRGIQNMIELQP-PFAAVTNRILGSSVATVTVKLETEPVTDTRINLKFVRTEIKADSLFGRNLDLPTLGVDIPSSDKLRRV 339
            G   +RS L  +LL   A  NRG  A    +  IE+IV +LE +NPNP   A  ET +  I GRW L+Y S+       +L+   +P I +GQ+ Q I  +   + N I++   P  A           T+   L   PV   R+ +   +  IK  S F R  DL  L +DIP  +  +RV
Sbjct:   25 GVKQSRSDLTTQLLEICAVTNRGQTASAEQKSLIEDIVALLEADNPNP---APVETDA--IDGRWNLIYLSTPFYKANPLLATTASPFIEVGQVRQTISMETGELINEIDITAFPMLA----------GTLVTNLRLTPVGAERLEVALEKATIKGGSAFER-FDLGALKLDIPVEEIYQRV 190          
BLAST of mRNA_F-serratus_M_contig1477.3297.1 vs. uniprot
Match: U9VVE8_9CYAN (Fibrillin n=1 Tax=Leptolyngbya sp. Heron Island J TaxID=1385935 RepID=U9VVE8_9CYAN)

HSP 1 Score: 65.9 bits (159), Expect = 7.290e-9
Identity = 44/143 (30.77%), Postives = 66/143 (46.15%), Query Frame = 0
Query:  176 LLRKVATLNRGFIAKKADRVDIEEIVEMLELENPNPGACAGFETQSSPIAGRWQLLYTSSLDVLSLQLNPTITIGQIFQQIESDGRGIQNMIELQPPFAAVTNRILGSSVATVTVKLETEPVTDTRINLKFVRTEIKADSLFG 318
            LL  +A  NRG +A    + DI   V  LE  NP     A  E     + G WQLLYT+S ++L +   P + +G I+Q +  D + I N+ E++     +           V+V    E V+D R+N++F R      S  G
Sbjct:    7 LLDAIAPTNRGLLAAPEQKADILSKVVCLEARNPTANPLAATEL----LNGNWQLLYTTSTELLGIDRFPLLGLGNIYQCVRIDQQRIYNLAEIKAALGGL-----------VSVTATFEAVSDQRVNVRFDRAIFGLQSTLG 134          
BLAST of mRNA_F-serratus_M_contig1477.3297.1 vs. uniprot
Match: A0A6P0NE78_9CYAN (Fibrillin n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0NE78_9CYAN)

HSP 1 Score: 65.5 bits (158), Expect = 9.880e-9
Identity = 44/135 (32.59%), Postives = 70/135 (51.85%), Query Frame = 0
Query:  176 LLRKVATLNRGFIAKKADRVDIEEIVEMLELENP--NPGACAGFETQSSPIAGRWQLLYTSSLDVLSLQLNPTITIGQIFQQIESDGRGIQNMIELQPPFAAVTNRILGSSVATVTVKLETEPVTDTRINLKFVR 308
            LL  +A  NRG +A    + DI   V  LE +NP  NP  CA        + G WQLLYT+S ++L +   P +++G I+Q +  D + I N+ E++   A + +         VT K E   V++ R++++F R
Sbjct:    7 LLNAIAPTNRGLLANDVQKEDILAQVTRLETKNPTPNPLECADL------LNGNWQLLYTTSSELLGIDRVPLLSLGNIYQCVRLDQQRIYNLAEIRSAIAGLVS---------VTAKFEV--VSNRRVDVRFDR 124          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1477.3297.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDC7_ECTSI4.980e-8963.36Plastid lipid associated protein n=1 Tax=Ectocarpu... [more]
A0A6H5K952_9PHAE7.740e-8252.63PAP_fibrillin domain-containing protein n=1 Tax=Ec... [more]
R7Q658_CHOCR2.340e-1933.33PAP_fibrillin domain-containing protein n=1 Tax=Ch... [more]
A0A5J4YK43_PORPP1.960e-1233.91Plastid lipid-associated protein 1, chloroplastic ... [more]
UPI001FF0EE992.460e-1238.54PAP/fibrillin family protein n=1 Tax=Synechococcus... [more]
UPI001A00F7692.270e-933.11PAP/fibrillin family protein n=1 Tax=Pleurocapsale... [more]
A0A1J0AEG1_9CYAN2.860e-935.71PAP fibrillin family protein n=1 Tax=Gloeomargarit... [more]
A0A7S0G8T1_9RHOD4.820e-932.97Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
U9VVE8_9CYAN7.290e-930.77Fibrillin n=1 Tax=Leptolyngbya sp. Heron Island J ... [more]
A0A6P0NE78_9CYAN9.880e-932.59Fibrillin n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 333..367
NoneNo IPR availableCOILSCoilCoilcoord: 373..400
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 21..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 38..444
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 32..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..20
IPR006843Plastid lipid-associated protein/fibrillin conserved domainPFAMPF04755PAP_fibrillincoord: 171..340
e-value: 2.5E-22
score: 79.8
IPR039633Plastid-lipid-associated proteinPANTHERPTHR31906FAMILY NOT NAMEDcoord: 104..332

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1477contigF-serratus_M_contig1477:190400..198678 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1477.3297.1mRNA_F-serratus_M_contig1477.3297.1Fucus serratus malemRNAF-serratus_M_contig1477 190399..198678 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1477.3297.1 ID=prot_F-serratus_M_contig1477.3297.1|Name=mRNA_F-serratus_M_contig1477.3297.1|organism=Fucus serratus male|type=polypeptide|length=444bp
YPQLRPPYLLTMLPRDRMGKIVGLMLLHSAIPSPCQAFVLPQSSCLRAPL
GPGMAGGFASTETTPMSPTWGLASYPLRREEFHMGWGFPTESRQRGRVVG
ALEGMRRPHQERSLAPRRSSVGSSNSDAAPVNVVYPVADDPRLAGGGGGG
GDGGGMGKTSGGAGDSDTRSSLKRKLLRKVATLNRGFIAKKADRVDIEEI
VEMLELENPNPGACAGFETQSSPIAGRWQLLYTSSLDVLSLQLNPTITIG
QIFQQIESDGRGIQNMIELQPPFAAVTNRILGSSVATVTVKLETEPVTDT
RINLKFVRTEIKADSLFGRNLDLPTLGVDIPSSDKLRRVLNKGKAKMEDT
KEKARDLTKKVKDTSSDKLQGALDKGKEAVEDSKEMARDLTKKVEDAADE
AKQVDVVGVLKDASKGEIDAGVGKSSGDEEARLQSPPPMAYPSV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006843PAP/fibrillin_dom
IPR039633PAP