prot_F-serratus_M_contig1467.3270.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1467.3270.1
Unique Nameprot_F-serratus_M_contig1467.3270.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length390
Homology
BLAST of mRNA_F-serratus_M_contig1467.3270.1 vs. uniprot
Match: A0A6H5KFU5_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU5_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 6.290e-48
Identity = 119/238 (50.00%), Postives = 143/238 (60.08%), Query Frame = 0
Query:  126 SKPLLSDSASMDFREKERRFVKGRFVIPGSEVQRKIADAMAGMLAAGGRAMSGQTLHEASDGSSGGDEH--------------DRTVSSVTAQSDTGDAYAYSQAPDGEANGGVTSGAV-SDANGEASGRSTRAGGVNSGAVLSRRASPRRSASPSKEGFHG-----------------VEEEKECVICMEDFTVADPEMLTLCSCGVNKTFFHYSCLLKWLSKHSYCPACRGYLYFE 331
            SKPLLS S S +FREKERRF+KGRFV+PGS+VQR+IADAMA +LAAG RAMSG     A+ G+ G + +              DR     T   D  D+ +   A D +    + S +  +  +  A GR   AGG   G+    RASPR+      EGF G                  EEE+ECVICME+F   DPEMLTLCSCGVNKTFFHY+CLL+WLSKHSYCPACRGYL+FE
Sbjct:  176 SKPLLSHSKSAEFREKERRFIKGRFVLPGSDVQRRIADAMAEVLAAGERAMSGTDASGATGGAIGPNRNHSGGGGGEGYREITDRGPQFATCHGDALDSDSDKIAHDDQGQFRLPSSSQPASLDATARGRMMPAGGA-IGSPSHLRASPRQGTC--NEGFRGGSSAVAGLGGRRAPGGEAEEERECVICMEEFCKEDPEMLTLCSCGVNKTFFHYACLLQWLSKHSYCPACRGYLFFE 410          
BLAST of mRNA_F-serratus_M_contig1467.3270.1 vs. uniprot
Match: D7G9A0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A0_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 2.990e-28
Identity = 61/93 (65.59%), Postives = 66/93 (70.97%), Query Frame = 0
Query:  256 RASPRRSASPSKEGFHG-----------------VEEEKECVICMEDFTVADPEMLTLCSCGVNKTFFHYSCLLKWLSKHSYCPACRGYLYFE 331
            RASPRR      EGF G                  EEE+ECVICME+F+  DPEMLTLCSCGVNKTFFHYSCLL+WLSKHSYCPACRGYL+FE
Sbjct:  105 RASPRRGTI--NEGFRGGSSAVAGLGGRRAPGGEAEEERECVICMEEFSKEDPEMLTLCSCGVNKTFFHYSCLLQWLSKHSYCPACRGYLFFE 195          
BLAST of mRNA_F-serratus_M_contig1467.3270.1 vs. uniprot
Match: A0A835Z175_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z175_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.530e-19
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 0
Query:  281 ICMEDFTVADPEMLTLCSCGVNKTFFHYSCLLKWLSKHSYCPACRGYLYFEEQ 333
            +C+ +FT  DPE+LTLCSCG+NKT FHY+CLL WL  HSYCPACRG LYFEE+
Sbjct:    1 MCLGEFTKEDPEVLTLCSCGMNKTAFHYACLLGWLEHHSYCPACRGELYFEER 53          
BLAST of mRNA_F-serratus_M_contig1467.3270.1 vs. uniprot
Match: A0A7S2CKZ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CKZ4_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.220e-16
Identity = 38/65 (58.46%), Postives = 45/65 (69.23%), Query Frame = 0
Query:  268 EGFHGVEEEKECVICMEDFTVADPEMLTLCSCGVNKTFFHYSCLLKWLSKHSYCPACRGYLYFEE 332
            +G     E+ ECVICME F  ++P M TLC CGVNKT FHY+CLL W  K  +CPAC G LY+EE
Sbjct:   64 DGVSSQPEDVECVICMETFDASNPMMPTLCKCGVNKTCFHYACLLTWKEKQDHCPACYGPLYYEE 128          
BLAST of mRNA_F-serratus_M_contig1467.3270.1 vs. uniprot
Match: A0A6U0WDD7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0WDD7_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 2.610e-16
Identity = 33/56 (58.93%), Postives = 44/56 (78.57%), Query Frame = 0
Query:  277 KECVICMEDFTVADPEMLTLCSCGVNKTFFHYSCLLKWLSKHSYCPACRGYLYFEE 332
            KECVICM++FT  +PE+  LC CGVNKT FHY CLL+W+   ++CP CRG ++F+E
Sbjct:  120 KECVICMDEFTEKNPEVPVLCDCGVNKTHFHYHCLLEWMQHRNFCPVCRGSIFFQE 175          
BLAST of mRNA_F-serratus_M_contig1467.3270.1 vs. uniprot
Match: K3WBN4_GLOUD (RING-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WBN4_GLOUD)

HSP 1 Score: 75.1 bits (183), Expect = 3.980e-12
Identity = 27/59 (45.76%), Postives = 48/59 (81.36%), Query Frame = 0
Query:  274 EEEKECVICMEDFTVADPEMLTLCSCGVNKTFFHYSCLLKWLSKHSYCPACRGYLYFEE 332
            E++ EC++C++ F+  +P++ TLCSCG+N+T FH SCL++W ++++ CP CR YL++E+
Sbjct:  143 EQDLECIMCLDIFSPDNPKVRTLCSCGMNRTNFHMSCLMEWKNRNAKCPVCREYLFYED 201          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1467.3270.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KFU5_9PHAE6.290e-4850.00RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G9A0_ECTSI2.990e-2865.59RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A835Z175_9STRA1.530e-1971.70RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S2CKZ4_9STRA1.220e-1658.46Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A6U0WDD7_9STRA2.610e-1658.93Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
K3WBN4_GLOUD3.980e-1245.76RING-type domain-containing protein n=1 Tax=Globis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 260..328
e-value: 2.3E-12
score: 48.0
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 277..325
e-value: 5.6E-10
score: 39.4
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 279..325
score: 10.63
NoneNo IPR availablePANTHERPTHR45798FAMILY NOT NAMEDcoord: 272..343
NoneNo IPR availablePANTHERPTHR45798:SF44RING-H2 FINGER PROTEIN ATL61-RELATEDcoord: 272..343
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 274..331

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1467contigF-serratus_M_contig1467:91434..104751 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1467.3270.1mRNA_F-serratus_M_contig1467.3270.1Fucus serratus malemRNAF-serratus_M_contig1467 82105..106578 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1467.3270.1 ID=prot_F-serratus_M_contig1467.3270.1|Name=mRNA_F-serratus_M_contig1467.3270.1|organism=Fucus serratus male|type=polypeptide|length=390bp
MSASPSGPGAAAASVADCLCCCSFCPHCCENPCDWLSSLLLSWDWLPIED
YARPPQPPGAPRPSRVSRAGGGSSRRVQEQQGVHGEGSGGRRRGGFGGPD
GVASGGEGIGGDRGGGLRRAFSADDSKPLLSDSASMDFREKERRFVKGRF
VIPGSEVQRKIADAMAGMLAAGGRAMSGQTLHEASDGSSGGDEHDRTVSS
VTAQSDTGDAYAYSQAPDGEANGGVTSGAVSDANGEASGRSTRAGGVNSG
AVLSRRASPRRSASPSKEGFHGVEEEKECVICMEDFTVADPEMLTLCSCG
VNKTFFHYSCLLKWLSKHSYCPACRGYLYFEEQRHRRPEERSGNHHGDRA
GTAARPGRVSSEEYGEALRRALRAGLSGGPAGNKADPES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING