prot_F-serratus_M_contig1466.3269.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1466.3269.1
Unique Nameprot_F-serratus_M_contig1466.3269.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length193
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1466.3269.1 vs. uniprot
Match: A0A6H5K1J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J1_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 5.360e-51
Identity = 88/192 (45.83%), Postives = 124/192 (64.58%), Query Frame = 0 
Query:    2 FSLDLVSGSSAPELAMQAAATATLWHRRMRHLNRKSLDLLKKVNNDGVSFDGTVPDCDVCAVGKSRQRARPKTADQHVQRPFQLVFTDLMGQFTPEALGGYKYVSMISDEHTRWTEIYLLKSKDGALHAFQSFVQLMLIPSGVRVERLRADKRGEFIGNDFKDYCTQKGVLLEYASTITPQQIGLSERVGGT 193
            F++DL        +A+   + A LWHRR+ H++ +SLD+L+KV  +GV ++G +  CDVCAVG S+Q+  PK A     RPFQLV TDLMG F+P ALGG+ Y+    D+H +W E++L+K K   + A Q F Q +L P  +R+E +RADK GE+    F  YC   G+ L +AST TPQ+IG +ER+G T
Sbjct:  246 FTMDLPETGEISGVALPVKSAA-LWHRRVGHVHGRSLDILRKVQGNGVEYNGELSACDVCAVGNSKQQNHPKRASYDASRPFQLVTTDLMGPFSPPALGGFLYIKKFVDQHIKWNEVFLMKEKSATVDALQLFNQSVLTPHELRLECVRADKGGEYTSWAFCKYCRDVGIKLLFASTNTPQRIGANERIGRT 436
[Close]
BLAST of mRNA_F-serratus_M_contig1466.3269.1 vs. uniprot
Match: A0A6H5KJN3_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN3_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 1.520e-45
Identity = 81/172 (47.09%), Postives = 108/172 (62.79%), Query Frame = 0 
Query:   22 TATLWHRRMRHLNRKSLDLLKKVNNDGVSFDGTVPDCDVCAVGKSRQRARPKTADQHVQRPFQLVFTDLMGQFTPEALGGYKYVSMISDEHTRWTEIYLLKSKDGALHAFQSFVQLMLIPSGVRVERLRADKRGEFIGNDFKDYCTQKGVLLEYASTITPQQIGLSERVGGT 193
            TA LWHRRM H+N KSLD+L++    G+ + G V DC  C +GKS Q+  PK A   V  PFQLVF D +G FTP ALGG+KY +   D+HT+W E+ L+K K  ++ A + F +  +IP   R+  LRADK  EF    ++ YC   G+ L++AS  TP QIG +ER G T
Sbjct:  572 TADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRT 743
[Close]
BLAST of mRNA_F-serratus_M_contig1466.3269.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 1.580e-45
Identity = 81/172 (47.09%), Postives = 108/172 (62.79%), Query Frame = 0 
Query:   22 TATLWHRRMRHLNRKSLDLLKKVNNDGVSFDGTVPDCDVCAVGKSRQRARPKTADQHVQRPFQLVFTDLMGQFTPEALGGYKYVSMISDEHTRWTEIYLLKSKDGALHAFQSFVQLMLIPSGVRVERLRADKRGEFIGNDFKDYCTQKGVLLEYASTITPQQIGLSERVGGT 193
            TA LWHRRM H+N KSLD+L++    G+ + G V DC  C +GKS Q+  PK A   V  PFQLVF D +G FTP ALGG+KY +   D+HT+W E+ L+K K  ++ A + F +  +IP   R+  LRADK  EF    ++ YC   G+ L++AS  TP QIG +ER G T
Sbjct:  694 TADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRT 865
[Close]
BLAST of mRNA_F-serratus_M_contig1466.3269.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 1.590e-45
Identity = 81/172 (47.09%), Postives = 108/172 (62.79%), Query Frame = 0 
Query:   22 TATLWHRRMRHLNRKSLDLLKKVNNDGVSFDGTVPDCDVCAVGKSRQRARPKTADQHVQRPFQLVFTDLMGQFTPEALGGYKYVSMISDEHTRWTEIYLLKSKDGALHAFQSFVQLMLIPSGVRVERLRADKRGEFIGNDFKDYCTQKGVLLEYASTITPQQIGLSERVGGT 193
            TA LWHRRM H+N KSLD+L++    G+ + G V DC  C +GKS Q+  PK A   V  PFQLVF D +G FTP ALGG+KY +   D+HT+W E+ L+K K  ++ A + F +  +IP   R+  LRADK  EF    ++ YC   G+ L++AS  TP QIG +ER G T
Sbjct:  572 TADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRT 743
[Close]
BLAST of mRNA_F-serratus_M_contig1466.3269.1 vs. uniprot
Match: A0A6H5JBV6_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBV6_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 2.470e-44
Identity = 82/172 (47.67%), Postives = 109/172 (63.37%), Query Frame = 0 
Query:   22 TATLWHRRMRHLNRKSLDLLKKVNNDGVSFDGTVPDCDVCAVGKSRQRARPKTADQHVQRPFQLVFTDLMGQFTPEALGGYKYVSMISDEHTRWTEIYLLKSKDGALHAFQSFVQLMLIPSGVRVERLRADKRGEFIGNDFKDYCTQKGVLLEYASTITPQQIGLSERVGGT 193
            +A LWHRRM H+N KSLD+L+K  N+GV     V DC  CA+GKS Q+  PK A   V+RPFQLVF D +G FTP ALGG+KY +   D+ T+W EI L+K K  ++ +   F +  ++P+G  +  LR D   EF   +F+ Y    G+ LE+AS  TPQQIG +ER G T
Sbjct:  525 SANLWHRRMGHINSKSLDILRKAPNNGVDHTEDVKDCGPCALGKSTQQPHPKEATYDVKRPFQLVFVDTLGPFTPTALGGFKYATKFVDQQTKWAEIGLMKDKTCSVDSLALFNKGTVVPTGEGIHCLRGDHGTEFTSAEFRQYYQDIGIKLEFASPNTPQQIGANERAGRT 696
[Close]
BLAST of mRNA_F-serratus_M_contig1466.3269.1 vs. uniprot
Match: A0A6H5KXM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXM1_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 2.270e-43
Identity = 81/182 (44.51%), Postives = 111/182 (60.99%), Query Frame = 0 
Query:   12 APELAMQAAATATLWHRRMRHLNRKSLDLLKKVNNDGVSFDGTVPDCDVCAVGKSRQRARPKTADQHVQRPFQLVFTDLMGQFTPEALGGYKYVSMISDEHTRWTEIYLLKSKDGALHAFQSFVQLMLIPSGVRVERLRADKRGEFIGNDFKDYCTQKGVLLEYASTITPQQIGLSERVGGT 193
            AP+       +A LWHRRM H+N KSLD+L+K   +GV + G V DC VC +GKS Q+  PK     V RPFQ V  D +G FTP ALGG+KY +   D+ T+W EI L+K +  ++ +   F +  ++P+G R+  LR D   EF   +F+ YC   G+ LE+AS  TPQQ+G +ER G T
Sbjct:  275 APDALALKVESADLWHRRMGHINGKSLDVLRKEPVNGVDYTGNVNDCCVCPLGKSAQQPHPKQVTYGVLRPFQHVSVDTLGPFTPTALGGFKYATKFVDQQTKWAEIVLMKDQACSVDSLALFKKGTVVPTGERIHCLRGDPGTEFTSAEFRQYCQDIGIKLEFASPNTPQQMGANERAGRT 456
[Close]
BLAST of mRNA_F-serratus_M_contig1466.3269.1 vs. uniprot
Match: A0A6H5JYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB5_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 3.030e-41
Identity = 77/173 (44.51%), Postives = 103/173 (59.54%), Query Frame = 0 
Query:   22 TATLWHRRMRHLNRKSLDLLKKVNNDGVSFDGTVPDCDVCAVGKSRQRARPKTADQHVQRPFQLVFTDLMGQFTPEALGGYKYVSMISDEHTRWTEIYLLKSKDG-ALHAFQSFVQLMLIPSGVRVERLRADKRGEFIGNDFKDYCTQKGVLLEYASTITPQQIGLSERVGGT 193
            TA LWHRRM H+N KSLD+L++    G+ + G V DC  C +GKS Q+  PK A   V  PFQLVF D  G FT   LGG+KY +   D+HT+W E+ L+K K   ++   + F +  +IP   R+  LRA K  EF    ++ YC   G+ L++AS  TP QIG +ER G T
Sbjct:  477 TADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTFGPFTSTTLGGFKYATKFVDQHTKWKEVVLMKDKTSCSIDGLELFNKGTVIPRSARIHVLRAGKGAEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRT 649
[Close]
BLAST of mRNA_F-serratus_M_contig1466.3269.1 vs. uniprot
Match: A0A6H5KZ34_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ34_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 3.640e-40
Identity = 71/175 (40.57%), Postives = 102/175 (58.29%), Query Frame = 0 
Query:   22 TATLWHRRMRHLNRKSLDLLKKVNNDGVSFDGTVPDCDVCAVGKSRQRARPKTADQHVQRPFQLVFTDLMGQFTPEAL---GGYKYVSMISDEHTRWTEIYLLKSKDGALHAFQSFVQLMLIPSGVRVERLRADKRGEFIGNDFKDYCTQKGVLLEYASTITPQQIGLSERVGGT 193
            +A  WHRR+ HLN +SLD+L+K    GV +  ++  C VC + K +Q   PK + + + RP QLV  D MG   P A    G + Y   I+D++T+  E+YLL+ K     A  ++   +    G R+E +R DK GE  G++F+DYC    + LEYA+T TPQQIG+SE  G T
Sbjct:   41 SADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSEGDGQT 215
[Close]
BLAST of mRNA_F-serratus_M_contig1466.3269.1 vs. uniprot
Match: A0A6H5JT61_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT61_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 4.930e-40
Identity = 78/184 (42.39%), Postives = 110/184 (59.78%), Query Frame = 0 
Query:   10 SSAPELAMQAAATATLWHRRMRHLNRKSLDLLKKVNNDGVSFDGTVPDCDVCAVGKSRQRARPKTADQHVQRPFQLVFTDLMGQFTPEALGGYKYVSMISDEHTRWTEIYLLKSKDGALHAFQSFVQLMLIPSGVRVERLRADKRGEFIGNDFKDYCTQKGVLLEYASTITPQQIGLSERVGGT 193
            SSA  +A      A   HRR+ HLN +S+ LL+K   + V F  ++  CD+CA+ KS Q A PK   +    P  LV+TD+MG+ TP A GG+ YVSM +D ++R  EIYLLK+K   + A  ++   +  P G  +E +R D+  E + N+F  YC   G+ +EYA+T TPQQ G+SER G T
Sbjct:   93 SSAGGVAFATTVNANTPHRRLGHLNFRSMKLLRKKEENEVDFSDSMTPCDICAISKSTQLAHPKKTSRETTAPMLLVYTDIMGKTTPLAKGGFGYVSMFNDAYSRIKEIYLLKAKSETVRALHAYNMQVAAPLGRGIEIIRCDRGRENVANEFTTYCMDSGITIEYAATNTPQQNGVSERDGQT 276
[Close]
BLAST of mRNA_F-serratus_M_contig1466.3269.1 vs. uniprot
Match: A0A6H5JYD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD3_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 1.060e-39
Identity = 75/179 (41.90%), Postives = 110/179 (61.45%), Query Frame = 0 
Query:   15 LAMQAAATATLWHRRMRHLNRKSLDLLKKVNNDGVSFDGTVPDCDVCAVGKSRQRARPKTADQHVQRPFQLVFTDLMGQFTPEALGGYKYVSMISDEHTRWTEIYLLKSKDGALHAFQSFVQLMLIPSGVRVERLRADKRGEFIGNDFKDYCTQKGVLLEYASTITPQQIGLSERVGGT 193
            +A  A   A  WHR +RHLN +S++LL+K  ++GV F  ++  CD+CA+ KSRQ A P+  ++    P QLV+TD MG+ TP A GG+ YVS  +D ++   EIYLLK+    + A  ++   +  P G R+E +R +  GE + N+F  Y     + +EYA+T TPQQ G+SER G T
Sbjct:  300 VACAATVNANTWHRWLRHLNFRSMELLRKKEDNGVDFSDSMTPCDICAISKSRQLAHPEKTNRETTAPMQLVYTDNMGKTTPLAKGGFGYVSKFTDAYSWMKEIYLLKAISETVRALHAYNMQVAAPLGRRIEIIRCESGGENVANEFTKYFMDSDITIEYAATNTPQQNGVSERDGQT 478
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1466.3269.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1J1_9PHAE5.360e-5145.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJN3_9PHAE1.520e-4547.09Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KJH6_9PHAE1.580e-4547.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J842_9PHAE1.590e-4547.09Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JBV6_9PHAE2.470e-4447.67Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KXM1_9PHAE2.270e-4344.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYB5_9PHAE3.030e-4144.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZ34_9PHAE3.640e-4040.57Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JT61_9PHAE4.930e-4042.39Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JYD3_9PHAE1.060e-3941.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 80..190
e-value: 5.5E-12
score: 45.9
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 78..193
score: 15.244
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 19..66
e-value: 1.7E-7
score: 31.0
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 72..193
e-value: 9.4E-19
score: 69.4
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 17..189
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 17..189
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 78..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1466contigF-serratus_M_contig1466:33991..34569 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1466.3269.1mRNA_F-serratus_M_contig1466.3269.1Fucus serratus malemRNAF-serratus_M_contig1466 33991..34569 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1466.3269.1 ID=prot_F-serratus_M_contig1466.3269.1|Name=mRNA_F-serratus_M_contig1466.3269.1|organism=Fucus serratus male|type=polypeptide|length=193bp
LFSLDLVSGSSAPELAMQAAATATLWHRRMRHLNRKSLDLLKKVNNDGVS
FDGTVPDCDVCAVGKSRQRARPKTADQHVQRPFQLVFTDLMGQFTPEALG
GYKYVSMISDEHTRWTEIYLLKSKDGALHAFQSFVQLMLIPSGVRVERLR
ADKRGEFIGNDFKDYCTQKGVLLEYASTITPQQIGLSERVGGT
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR025724GAG-pre-integrase_dom
IPR036397RNaseH_sf
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf