prot_F-serratus_M_contig1463.3256.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1463.3256.1
Unique Nameprot_F-serratus_M_contig1463.3256.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length125
Homology
BLAST of mRNA_F-serratus_M_contig1463.3256.1 vs. uniprot
Match: D7FRR9_ECTSI (rRNA biogenesis protein rrp5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR9_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 1.570e-53
Identity = 101/125 (80.80%), Postives = 109/125 (87.20%), Query Frame = 0
Query:    1 KGLSLSQLGKGCGVYGSVASAEDHGYVVTLGLEGVTAFLPAKDAPEGGLKAGQPVEAVIQAVKAVARTVTLSAKASLVASAVTSGTSFDLRSIKPGMLVDAAVKSLLPNGMLVGFLGYFTGCVDH 125
            KGLSLSQL KG GVYGSVASAEDHGYVVTLGL+GVTAFLP KD P+ GL+ GQPVEAVIQ VKA ARTVTL+A  SLV+SAVT GTSFDLRS+KPGMLVDA V S+L NG+LV FLGYF GCVDH
Sbjct:  243 KGLSLSQLTKGSGVYGSVASAEDHGYVVTLGLDGVTAFLPKKDGPKDGLEPGQPVEAVIQTVKAAARTVTLTADPSLVSSAVTQGTSFDLRSLKPGMLVDAIVDSVLSNGILVSFLGYFAGCVDH 367          
BLAST of mRNA_F-serratus_M_contig1463.3256.1 vs. uniprot
Match: A0A6H5LPP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LPP1_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 7.140e-48
Identity = 98/127 (77.17%), Postives = 106/127 (83.46%), Query Frame = 0
Query:    1 KGLSLSQLGKGCGVYGSVASAEDHGYVVTLGLEGVTAFLPAKDAPEGGLKAGQPVEAVIQAVKAVARTVTLSAKASLVASAVTSGTSFDLRSIKPGMLVDAAVKSLLPNGMLV--GFLGYFTGCVDH 125
            KGLSLSQL KG GVYGSVASAEDHGYVVTLGL+GVTAFLP KD P+ GL+ GQPVEA    VKA ARTVTL+A  SLV+SAVT GTSFDLRS+KPGMLVDA V S+L NG+LV   FLGYF GCVDH
Sbjct:  293 KGLSLSQLTKGNGVYGSVASAEDHGYVVTLGLDGVTAFLPKKDGPKEGLEPGQPVEAT---VKAAARTVTLTADPSLVSSAVTQGTSFDLRSLKPGMLVDAIVDSVLSNGILVRVSFLGYFAGCVDH 416          
BLAST of mRNA_F-serratus_M_contig1463.3256.1 vs. uniprot
Match: W7TCI2_9STRA (Rrna biogenesis protein rrp5 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCI2_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.050e-19
Identity = 56/129 (43.41%), Postives = 78/129 (60.47%), Query Frame = 0
Query:    1 KGLSLSQLGKGCGVYGSVASAEDHGYVVTLGLEGVTAFLPAKDAPEGG-----LKAGQPVEAVIQAVKAVARTVTLSAKASLVASAVTSGTSFDLRSIKPGMLVDAAVKSLLPNGMLVGFLGYFTGCVD 124
            +GL L  +  G  + G+VAS EDHGYVV+ GLEGVTAFL  K    G      L  G PVE V+  VK  +R +T     +++  A+T G++  L  +KPGMLV+AA+ ++L NG+ + FLG  +G V 
Sbjct:  259 RGLKLEHVLPGGALMGAVASVEDHGYVVSTGLEGVTAFLARKHVKGGAEVEKALVKGSPVEIVVLDVKEASRAITCGFDPAVLPRALTRGSALTLAGLKPGMLVNAAIDAILKNGLALTFLGGLSGVVS 387          
BLAST of mRNA_F-serratus_M_contig1463.3256.1 vs. uniprot
Match: A0A7S3MGU8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MGU8_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.170e-18
Identity = 53/126 (42.06%), Postives = 73/126 (57.94%), Query Frame = 0
Query:    1 KGLSLSQLGKGCGVYGSVASAEDHGYVVTLGLEGVTAFLPAKDAP--EGGLKAGQPVEAVIQAVKAVARTVTLSAKASLVASAVTSGTSFDLRSIKPGMLVDAAVKSLLPNGMLVGFLGYFTGCVD 124
            +GL++  +  G  +YG VAS EDHGYV++ G+ G   FLP K  P  +  L+ GQP+E V  AV   A++ TL A    V  A+T   +    S+ PGMLV+  V   + NG+LV FLG F G +D
Sbjct:  189 RGLAMKHVSVGFPLYGCVASKEDHGYVISAGINGANFFLPVKALPTTKSDLEIGQPIECVTTAVNDGAQSATLRAHPKAVYEALTRSGNLAFTSLIPGMLVNCVVDKKVENGVLVNFLGMFYGVID 314          
BLAST of mRNA_F-serratus_M_contig1463.3256.1 vs. uniprot
Match: A0A078F5Z4_BRANA (BnaA05g27100D protein n=11 Tax=Brassiceae TaxID=981071 RepID=A0A078F5Z4_BRANA)

HSP 1 Score: 89.7 bits (221), Expect = 2.330e-18
Identity = 57/127 (44.88%), Postives = 76/127 (59.84%), Query Frame = 0
Query:    1 KGLSLSQLGKGCGVYGSVASAEDHGYVVTLGLEGVTAFLPAKDAPEGGLKAGQPVEAVIQAVKAVARTVTLSAKASLVASAVT---SGTSFDLRSIKPGMLVDAAVKSLLPNGMLVGFLGYFTGCVD 124
            KG SL     G  V  SV S EDHGY++  GL  +T F+   +     LK GQ ++ V+  +    + V+LSA    VA +VT   SG SFDL  + PGM+V+A V+S+L NG+L+GFL YFTG VD
Sbjct:  216 KGFSLDSFQPGMVVTASVKSVEDHGYILHFGLPSITGFIKKSNDGNQELKTGQLIQGVVTNIDKERKIVSLSADPDSVAKSVTKDLSGMSFDL--LIPGMMVNARVQSVLENGILLGFLMYFTGTVD 340          
BLAST of mRNA_F-serratus_M_contig1463.3256.1 vs. uniprot
Match: A0A078JP77_BRANA (BnaAnng23730D protein n=1 Tax=Brassica napus TaxID=3708 RepID=A0A078JP77_BRANA)

HSP 1 Score: 85.5 bits (210), Expect = 8.920e-18
Identity = 54/127 (42.52%), Postives = 73/127 (57.48%), Query Frame = 0
Query:    1 KGLSLSQLGKGCGVYGSVASAEDHGYVVTLGLEGVTAFLPAKDAPEGGLKAGQPVEAVIQAVKAVARTVTLSAKASLVASAVT---SGTSFDLRSIKPGMLVDAAVKSLLPNGMLVGFLGYFTGCVD 124
            KG SL     G  V  +V S EDHGY++  G+  +T F+         LK GQ ++ V+  +    + V+LS+    VA  VT   SG SFDL  + PGM+V+A V+S L NG+L+GFL YFTG VD
Sbjct:   88 KGFSLDSFQPGMVVTANVKSVEDHGYILQFGMPSITGFIKKSHEGTRELKTGQLIQGVVTNIDKERKIVSLSSDPDSVAKCVTKDLSGMSFDL--LIPGMMVNARVQSALENGLLLGFLMYFTGTVD 212          
BLAST of mRNA_F-serratus_M_contig1463.3256.1 vs. uniprot
Match: A0A3P5ZAR7_BRACM (Uncharacterized protein n=3 Tax=Brassica campestris TaxID=3711 RepID=A0A3P5ZAR7_BRACM)

HSP 1 Score: 87.4 bits (215), Expect = 1.500e-17
Identity = 56/127 (44.09%), Postives = 74/127 (58.27%), Query Frame = 0
Query:    1 KGLSLSQLGKGCGVYGSVASAEDHGYVVTLGLEGVTAFLPAKDAPEGGLKAGQPVEAVIQAVKAVARTVTLSAKASLVASAVT---SGTSFDLRSIKPGMLVDAAVKSLLPNGMLVGFLGYFTGCVD 124
            KG SL     G     SV S EDHGY++  GL  +T F+   +     LK GQ ++ V+  +    + V+LSA    VA  VT   SG SFDL  + PGM+V+A V+S+L NG+L+GFL YFTG VD
Sbjct:  216 KGFSLDSFQPGMVFTASVKSVEDHGYILHFGLPSITGFIKKSNDGNQELKTGQLIQGVVTNIDKERKIVSLSADPDSVAKCVTKDLSGMSFDL--LIPGMMVNARVQSVLENGILLGFLMYFTGTVD 340          
BLAST of mRNA_F-serratus_M_contig1463.3256.1 vs. uniprot
Match: A0A078IEV4_BRANA (BnaAnng09360D protein n=1 Tax=Brassica napus TaxID=3708 RepID=A0A078IEV4_BRANA)

HSP 1 Score: 85.9 bits (211), Expect = 5.130e-17
Identity = 54/127 (42.52%), Postives = 73/127 (57.48%), Query Frame = 0
Query:    1 KGLSLSQLGKGCGVYGSVASAEDHGYVVTLGLEGVTAFLPAKDAPEGGLKAGQPVEAVIQAVKAVARTVTLSAKASLVASAVT---SGTSFDLRSIKPGMLVDAAVKSLLPNGMLVGFLGYFTGCVD 124
            KG SL     G  V  +V S EDHGY++  G+  +T F+         LK GQ ++ V+  +    + V+LS+    VA  VT   SG SFDL  + PGM+V+A V+S L NG+L+GFL YFTG VD
Sbjct:  218 KGFSLDSFQPGMVVTANVKSVEDHGYILQFGMPSITGFIKKSHEETRELKTGQLIQGVVTNIDKERKIVSLSSDPDSVAKCVTKDLSGMSFDL--LIPGMMVNARVQSALENGLLLGFLMYFTGTVD 342          
BLAST of mRNA_F-serratus_M_contig1463.3256.1 vs. uniprot
Match: A0A0D3AED5_BRAOL (Uncharacterized protein n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=A0A0D3AED5_BRAOL)

HSP 1 Score: 85.5 bits (210), Expect = 7.090e-17
Identity = 54/127 (42.52%), Postives = 73/127 (57.48%), Query Frame = 0
Query:    1 KGLSLSQLGKGCGVYGSVASAEDHGYVVTLGLEGVTAFLPAKDAPEGGLKAGQPVEAVIQAVKAVARTVTLSAKASLVASAVT---SGTSFDLRSIKPGMLVDAAVKSLLPNGMLVGFLGYFTGCVD 124
            KG SL     G  V  +V S EDHGY++  G+  +T F+         LK GQ ++ V+  +    + V+LS+    VA  VT   SG SFDL  + PGM+V+A V+S L NG+L+GFL YFTG VD
Sbjct:  216 KGFSLDSFQPGMVVTANVKSVEDHGYILQFGMPSITGFIKKSHEGTRELKTGQLIQGVVTNIDKERKIVSLSSDPDSVAKCVTKDLSGMSFDL--LIPGMMVNARVQSALENGLLLGFLMYFTGTVD 340          
BLAST of mRNA_F-serratus_M_contig1463.3256.1 vs. uniprot
Match: UPI0006AA97EB (rRNA biogenesis protein RRP5-like n=1 Tax=Brassica napus TaxID=3708 RepID=UPI0006AA97EB)

HSP 1 Score: 85.5 bits (210), Expect = 7.090e-17
Identity = 54/127 (42.52%), Postives = 73/127 (57.48%), Query Frame = 0
Query:    1 KGLSLSQLGKGCGVYGSVASAEDHGYVVTLGLEGVTAFLPAKDAPEGGLKAGQPVEAVIQAVKAVARTVTLSAKASLVASAVT---SGTSFDLRSIKPGMLVDAAVKSLLPNGMLVGFLGYFTGCVD 124
            KG SL     G  V  +V S EDHGY++  G+  +T F+         LK GQ ++ V+  +    + V+LS+    VA  VT   SG SFDL  + PGM+V+A V+S L NG+L+GFL YFTG VD
Sbjct:  216 KGFSLDSFQPGMVVTANVKSVEDHGYILQFGMPSITGFIKKSHEGTRELKTGQLIQGVVTNIDKERKIVSLSSDPDSVAKCVTKDLSGMSFDL--LIPGMMVNARVQSALENGLLLGFLMYFTGTVD 340          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1463.3256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRR9_ECTSI1.570e-5380.80rRNA biogenesis protein rrp5 n=1 Tax=Ectocarpus si... [more]
A0A6H5LPP1_9PHAE7.140e-4877.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TCI2_9STRA1.050e-1943.41Rrna biogenesis protein rrp5 n=3 Tax=Monodopsidace... [more]
A0A7S3MGU8_9STRA1.170e-1842.06Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A078F5Z4_BRANA2.330e-1844.88BnaA05g27100D protein n=11 Tax=Brassiceae TaxID=98... [more]
A0A078JP77_BRANA8.920e-1842.52BnaAnng23730D protein n=1 Tax=Brassica napus TaxID... [more]
A0A3P5ZAR7_BRACM1.500e-1744.09Uncharacterized protein n=3 Tax=Brassica campestri... [more]
A0A078IEV4_BRANA5.130e-1742.52BnaAnng09360D protein n=1 Tax=Brassica napus TaxID... [more]
A0A0D3AED5_BRAOL7.090e-1742.52Uncharacterized protein n=1 Tax=Brassica oleracea ... [more]
UPI0006AA97EB7.090e-1742.52rRNA biogenesis protein RRP5-like n=1 Tax=Brassica... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 8..73
e-value: 2.9E-14
score: 55.1
NoneNo IPR availablePANTHERPTHR23270PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5coord: 1..124
IPR003029S1 domainPROSITEPS50126S1coord: 11..74
score: 10.144
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 3..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1463contigF-serratus_M_contig1463:7992..9109 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1463.3256.1mRNA_F-serratus_M_contig1463.3256.1Fucus serratus malemRNAF-serratus_M_contig1463 7990..9109 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1463.3256.1 ID=prot_F-serratus_M_contig1463.3256.1|Name=mRNA_F-serratus_M_contig1463.3256.1|organism=Fucus serratus male|type=polypeptide|length=125bp
KGLSLSQLGKGCGVYGSVASAEDHGYVVTLGLEGVTAFLPAKDAPEGGLK
AGQPVEAVIQAVKAVARTVTLSAKASLVASAVTSGTSFDLRSIKPGMLVD
AAVKSLLPNGMLVGFLGYFTGCVDH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003029S1_domain
IPR012340NA-bd_OB-fold