prot_F-serratus_M_contig1459.3243.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1459.3243.1
Unique Nameprot_F-serratus_M_contig1459.3243.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length580
Homology
BLAST of mRNA_F-serratus_M_contig1459.3243.1 vs. uniprot
Match: D7G1R1_ECTSI (60S ribosomal export protein NMD3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1R1_ECTSI)

HSP 1 Score: 603 bits (1556), Expect = 3.010e-209
Identity = 318/502 (63.35%), Postives = 385/502 (76.69%), Query Frame = 0
Query:   93 LPNILCCLCGRSIQPNGANMCGACLKEQVDVTDGITKKGLVMIQCRRCLKWQTKHDNWTSFELESAPFLALTLKKIPGIAKQEVVDAKWVWTEPHSKRLKIKVTLRKEVLNKVMLQQEATVEFVVHNKQCNVCNKEFTNQTWKAVVQIRQKAGHKRTLLLLEQQILKADAHRKCIAVESVRGGMDVLFGTKNEAAEFVSFLGSVAPIRTRESTKLVSTDNHSNIRNTQHTVAVDIPTLCRDDLVVLPKTVGNRLQGSLCLVHRITSVVQFLSPLSGETADMTADKYWRVSTDPLLTASSLVEFVVLDCEPSEYGSRGVGGGGKGASDGG---------AGKESPALWDVVVALASEVGNENHTFSVTTVLGG-KGGRRGIEAGDALLGYDLRDKIFNEALLKGLSRELPDIVLVKRAPAPK---ARSKRYKMRSLEDEARGDETSGSGXXSGKKGAGD---------------VQDLDRLDEAQEVAAIMEELAMDDDPRGE 566
            L  ILCCLCGR IQPNGANMCGACL++QVDVT+GI KKGL +IQCRRCLKW TK+D+W+ FELESAPFLAL LKKIPG+AKQ++VDAKW+WTEPHSKRLK+++T+RKEVLNKVMLQQ+ATVEFVVHN+QCNVCNKEFTNQTWKA+VQIRQ+AGHKRT++LLEQ+IL+ADAHRKCI+VE+VRGGMDV FG K++A EFV +L SVAPIR+RESTKLVSTDNHSN+RNTQHTVAVD+PTLCRDDLV LP+  GNRLQG++ +V R+TSVVQF+ P SG+TADM AD+YWR   +PLL+ASSL EFVVLD EP++  S                       AG ++ +LW+VVVAL S+VG+ + TF+V T L     G   +EAGD LLGYDLR K FNEALL GLS ++PDIVLVKRAP PK   ++ KRYK+RSL+           G   G+ G  D                 +    DE +E+AA++EEL+MD++ R E
Sbjct:   60 LATILCCLCGRPIQPNGANMCGACLRDQVDVTEGIPKKGLTIIQCRRCLKWLTKNDHWSGFELESAPFLALVLKKIPGLAKQDLVDAKWIWTEPHSKRLKVRITVRKEVLNKVMLQQDATVEFVVHNRQCNVCNKEFTNQTWKAIVQIRQRAGHKRTMMLLEQRILQADAHRKCISVETVRGGMDVYFGAKHDAVEFVGYLSSVAPIRSRESTKLVSTDNHSNVRNTQHTVAVDVPTLCRDDLVALPRGSGNRLQGTITVVQRVTSVVQFVGPSSGQTADMPADRYWRSPPEPLLSASSLTEFVVLDSEPADGFSAAXXXXXXXXXXXXXXXXXXXXXAGTKNKSLWEVVVALDSDVGSADDTFTVLTHLSADSAGLHPLEAGDMLLGYDLRGKNFNEALLSGLSGDVPDIVLVKRAPPPKTAQSKKKRYKLRSLD-----------GTGGGEGGGADHXXXXXXXXXXXXXXXSNTGGSDE-REIAALIEELSMDEELRAE 549          
BLAST of mRNA_F-serratus_M_contig1459.3243.1 vs. uniprot
Match: A0A836CPD6_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPD6_9STRA)

HSP 1 Score: 388 bits (997), Expect = 1.090e-125
Identity = 205/412 (49.76%), Postives = 279/412 (67.72%), Query Frame = 0
Query:   93 LPNILCCLCGRSIQPNGANMCGACLKEQVDVTDGITKKGLVMIQCRRCLKWQTKHDNWTSFELESAPFLALTLKKIPGIAKQEVVDAKWVWTEPHSKRLKIKVTLRKEVLNKVMLQQEATVEFVVHNKQCNVCNKEFTNQTWKAVVQIRQKAGHKRTLLLLEQQILKADAHRKCIAVESVRGGMDVLFGTKNEAAEFVSFLGSVAPIRTRESTKLVSTDNHSNIRNTQHTVAVDIPTLCRDDLVVLPKTVGN-----RLQGSLCLVHRITSVVQFLSPLSGETADMTADKYWRVSTDPLLTASSLVEFVVLDCEPSEYGSRGVGGGGKGASDGGAGKESPALWDVVVALASEVGNENHTFSVTTVLGGKGGRRGIEAGDALLGYDLRDKIFNEALLKGLSRELPDIVLVKRA 499
            L  ILCCLCG+SIQPN A +CG CL+ +VD+T+ I +KGL + QCR+CL+WQ K+D++   +LES   LAL LK+IPG++K ++VDA +VWTEPHS R+K+K+TL+++VLN VMLQQE  VEFVV  +QC+ CN+EFTNQTWKAVVQ+RQ+  HKRT   LEQ IL A+A  + + + S++ GMD  F  +  A +F  +L  V P R+ +S KLVS DNHSNI N Q ++ VDI  LC+ DLVV+P   G       L G + LV  +TSVVQ L P +  +A++T D++WR    PL +ASSL+EF VLD EP       V G G  A+   A   +  L +  VA ++++G  + TF+VTT LG       ++AGD ++GYDLR   FN+A L GL  +LPD+VLV++A
Sbjct:    6 LGAILCCLCGKSIQPNSAALCGECLRAEVDITENIQEKGLKVYQCRKCLRWQGKNDHYVPCQLESLELLALCLKRIPGLSKADIVDAAFVWTEPHSMRIKVKLTLKRDVLNGVMLQQEKVVEFVVQWRQCSDCNREFTNQTWKAVVQVRQRVDHKRTFFYLEQLILAANAQHRAVDIRSLKDGMDFFFAERAHALQFADWLAGVVPQRSTKSKKLVSVDNHSNISNEQLSLRVDIVPLCKGDLVVVPAGGGKGGGAAHLAGCVSLVANVTSVVQLLDPTTLRSAELTPDRFWRSPLTPLASASSLIEFTVLDVEP-------VRGAGVTAATAAAAGGACVLAEAEVARSADLGANDDTFTVTTHLGHL-----LQAGDTVMGYDLRGANFNDAALVGLRGDLPDVVLVRKA 405          
BLAST of mRNA_F-serratus_M_contig1459.3243.1 vs. uniprot
Match: T0RPV6_SAPDV (60S ribosomal export protein NMD3 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0RPV6_SAPDV)

HSP 1 Score: 333 bits (853), Expect = 3.840e-104
Identity = 186/432 (43.06%), Postives = 262/432 (60.65%), Query Frame = 0
Query:   91 KALPNILCCLCGRSIQPNGANMCGACLKEQVDVTDGITKKGLVMIQCRRCLKWQTKHDNWTSFELESAPFLALTLKKIPGIAKQEVVDAKWVWTEPHSKRLKIKVTLRKEVLNKVMLQQEATVEFVVHNKQCNVCNKEFTNQTWKAVVQIRQKAGHKRTLLLLEQQILKADAHRKCIAVESVRGGMDVLFGTKNEAAEFVSFLGSVAPIRTRESTKLVSTDNHSNIRNTQHTVAVDIPTLCRDDLVVLPKTVGNRLQG--SLCLVHRITSVVQFLSPLSGETADMTADKYWRVSTDPLLTASSLVEFVVLDCEPSEYGSRGVGGGGKGASDGGAGKESPALWDVVVALASEVGNENHTFSVTTVLGGKGGRRGIEAGDALLGYDLRDKIFNEALLKGLSRE---LPDIVLVKRAPAPKA--RSKRYKMRSLE 515
            ++LPNILCC+C   I+ N ANMC +CLK QVDVT+GI K+ ++M QCR CLKW      W + ELES   LA+ LKKI G+ K ++VDA WVWTEPHSKRLK+K+T++KEV+N  +LQQ   V F+V N+QC+ C   FTN +WKAVVQ+RQK  HKRT   LEQ ILK   H K  ++ES   G+D  F  +N A  FV FL    PI+ + + KL+S DNHSN  N + T AVD+ T+C+DDLV LP  +  +L    SLC+V ++TS +  + P + + A++  DKYWR     L ++  LVE+ VLD  P +  +  +GG     +          L ++ +   S+ G  +  F  TT LG       +  GD  +GYDL   +FN++  K L      LPD++LV++    +   RS+ +K++++E
Sbjct:    7 QSLPNILCCMCAVPIKANAANMCVSCLKGQVDVTEGIPKE-IIMHQCRGCLKWS--RPPWVAAELESRELLAICLKKISGLNKVKLVDAGWVWTEPHSKRLKLKLTVQKEVMNGAILQQSFVVTFIVRNQQCDECQASFTNNSWKAVVQVRQKVDHKRTFFYLEQLILKHRVHEKTSSIESHPDGVDFFFVERNHALRFVDFLSETVPIKLKTAKKLISADNHSNTANYKFTYAVDLATVCKDDLVALPLKLARQLGNISSLCIVTQVTSSIHVIDPFTMQRAEIDNDKYWRYPFKALRSSKQLVEYTVLDSNPLQIPT--LGGVPVRTN------RKTRLAEMEIVRNSDFGVNDTRFQTTTHLGML-----LNVGDTAMGYDLSTSVFNDSDTKPLDEAGITLPDVILVRKQFLRRVQKRSRNWKLKNIE 422          
BLAST of mRNA_F-serratus_M_contig1459.3243.1 vs. uniprot
Match: A0A067BRX2_SAPPC (60S ribosomal export protein NMD3 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BRX2_SAPPC)

HSP 1 Score: 331 bits (849), Expect = 8.410e-104
Identity = 192/432 (44.44%), Postives = 269/432 (62.27%), Query Frame = 0
Query:   90 GKALPNILCCLCGRSIQPNGANMCGACLKEQVDVTDGITKKGLVMIQCRRCLKWQ--TKHDNWTSFE--LESAPFLALTLKKIPGIAKQ-EVVDAKWVWTEPHSKRLKIKVTLRKEVLNKVMLQQEATVEFVVHNKQCNVCNKEFTNQTWKAVVQIRQKAGHKRTLLLLEQQILKADAHRKCIAVESVRGGMDVLFGTKNEAAEFVSFLGSVAPIRTRESTKLVSTDNHSNIRNTQHTVAVDIPTLCRDDLVVLPKTVGNRLQGSLCLVHRITSVVQFLSPLSGETADMTADKYWRVSTDPLLTASSLVEFVVLDCEPSEYGSRGVGGGGKGASDGGAGKESPALWDVV-VALASEVGNENHTFSVTTVLGGKGGRRGIEAGDALLGYDLRDKIFNEALLKGLSRELPDIVLVKRA-PAPKARSKRYKMRSL 514
            G +LP+ LCC+CG SI+PN ANMC ACL  +VD+T+GITK+  V+IQCR CL++Q   K ++    E  LES   + L LKKI G+ +  +++DA ++WTEPHSKR+K+K+T+RKE +   M+Q+   V FVV N +C  CNK++ N TW+A+VQIRQK  HKRT L LEQ ILK  AH +CI + S + GMD  FG KN A  F SFL    P+RT+ + KLVSTDNHSN  N + T+  +I  LC+DDLV+L K +  +   S+ +V R+T+ +  + P +   +++T++KYW+     L TA+S+VEF+VLD EP +   +               ++S  L  VV VA  S+ G  + TF VT+ LG     R + AGD + GYDL    F  + L  L  ELPDI+LV+R  P  +   KR + + L
Sbjct:   13 GSSLPS-LCCMCGVSIEPNLANMCVACLSNEVDITEGITKEA-VLIQCRGCLRFQRGAKGNDGAFAECPLESLELMTLCLKKIQGLGRDVKLMDASFIWTEPHSKRIKLKLTIRKEAMRNAMVQKSFVVTFVVENLKCADCNKQYRNNTWQALVQIRQKVPHKRTFLHLEQIILKHQAHTRCIGMASEKDGMDFFFGEKNSAERFASFLSQHVPLRTKMARKLVSTDNHSNTANVKLTIVAEIAPLCKDDLVILEKRIAQQCGMSVAVVSRVTTQIHLVDPRTCRRSEVTSEKYWKHPFHALDTAASMVEFIVLDVEPLQVTPKDT-------------QDSADLLAVVEVARVSDFGFNDTTFHVTSHLG-----RYLSAGDTVKGYDLGICNFGSSQLYHLKDELPDIILVRRVFPKKEKEGKRQERKKL 424          
BLAST of mRNA_F-serratus_M_contig1459.3243.1 vs. uniprot
Match: A0A024UHG0_9STRA (60S ribosomal export protein NMD3 n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024UHG0_9STRA)

HSP 1 Score: 330 bits (846), Expect = 4.770e-103
Identity = 187/430 (43.49%), Postives = 255/430 (59.30%), Query Frame = 0
Query:   93 LPNILCCLCGRSIQPNGANMCGACLKEQVDVTDGITKKGLVMIQCRRCLKWQTKHDNWTSFELESAPFLALTLKKIPGIAKQEVVDAKWVWTEPHSKRLKIKVTLRKEVLNKVMLQQEATVEFVVHNKQCNVCNKEFTNQTWKAVVQIRQKAGHKRTLLLLEQQILKADAHRKCIAVESVRGGMDVLFGTKNEAAEFVSFLGSVAPIRTRESTKLVSTDNHSNIRNTQHTVAVDIPTLCRDDLVVLPKTVGNRLQG--SLCLVHRITSVVQFLSPLSGETADMTADKYWRVSTDPLLTASSLVEFVVLDCEPSEYGSRGVGGGGKGASDGGAGKESPALWDVVVALASEVGNENHTFSVTTVLGGKGGRRGIEAGDALLGYDLRDKIFNEALLKGLSR---ELPDIVLVKRAPAPKA--RSKRYKMRSLE 515
            LP+ILCC+C   I+ N ANMC +CLK QVDVT+GI K+ ++M QCR CLKW      W S +LES   LA+ LKKI G+ K ++VDA W+WTEPHSKRLK+K+T++KEV+N  +LQQ   V F+V N+QC+ C   FTN +WKAVVQ+RQK  HKRT   LEQ ILK   H K  ++ES   G+D  F  +N A  FV FL    PI  + + KL+S DNHSN  N + T AVDI  +C+DDLV LP  +  +L    SLCLV ++TS +  + P + + A++  DKYWR     L ++  L E+ VLD  P E  ++    GG              L DV +   S+ G  +  F   T LG       +  GD  +GYDL   +FN+   K L      LPD+VLV++    +   RS+++K++++E
Sbjct:    9 LPDILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKE-IIMHQCRGCLKWS--RPQWVSADLESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFIVTFIVRNQQCDDCQASFTNHSWKAVVQVRQKVEHKRTFFFLEQLILKHRVHEKTTSIESQPDGVDFFFVERNHALRFVDFLQETVPISLKTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIDNDKYWRYPFKALRSSKQLTEYTVLDSSPLEISTK----GGIPVRT----NRKTRLADVDIVRNSDFGVNDMRFHTVTHLGML-----LNVGDTAMGYDLSTSVFNDLDTKPLDEAGISLPDVVLVRKQFLRRVQKRSRKWKLKTIE 422          
BLAST of mRNA_F-serratus_M_contig1459.3243.1 vs. uniprot
Match: A0A6G0WWT1_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WWT1_9STRA)

HSP 1 Score: 327 bits (839), Expect = 1.160e-102
Identity = 185/432 (42.82%), Postives = 263/432 (60.88%), Query Frame = 0
Query:   96 ILCCLCGRSIQPNGANMCGACLKEQVDVTDGITKKGLVMIQCRRCLKWQTKHDN------WTSFELESAPFLALTLKKIPGIAKQ-EVVDAKWVWTEPHSKRLKIKVTLRKEVLNKVMLQQEATVEFVVHNKQCNVCNKEFTNQTWKAVVQIRQKAGHKRTLLLLEQQILKADAHRKCIAVESVRGGMDVLFGTKNEAAEFVSFLGSVAPIRTRESTKLVSTDNHSNIRNTQHTVAVDIPTLCRDDLVVLPKTVGNRLQGSLCLVHRITSVVQFLSPLSGETADMTADKYWRVSTDPLLTASSLVEFVVLDCEPSEYGSRGVGGGGKGASDGGAGKESPALWDVVVALASEVGNENHTFSVTTVLGGKGGRRGIEAGDALLGYDLRDKIFNEALLKGLSRELPDIVLVKR------APAPKARSKRYKMRSL 514
            ILCC+CG SI+PN ANMC  CL  +VD+T+GI+K+ L ++QCR CL++Q           ++   LES   +AL LKKI G+ K  +++DA ++WTEPHSKR+K+K+T+RKE +    LQ+   V FVV N +C  C K++ N+TWKAVVQIRQK  HKRT   LEQ ILK  AH + + + + + GMD  FG KN A  F  F+G   P+R++ + KLVSTDNH+N  N + T+  ++  +C+DD++VL K +   +  SL LV R+T+ +  L PL+   A++T++KYW+   + L +ASS+V+F+VLD E                 D  A K+   + DV VA  S+ G  + TF VTT LG     R + AGD + GYDL    F    L  L  +LPDI+LV+R      A  PK++ KR+  +SL
Sbjct:    3 ILCCMCGVSIEPNMANMCAPCLSNEVDITEGISKE-LTLVQCRGCLRFQRTAGGKGSQLVFSECPLESLELMALCLKKIHGLNKDVKLIDASFIWTEPHSKRIKLKLTIRKEAVRNAFLQKSFVVTFVVENLKCADCTKQYRNETWKAVVQIRQKVNHKRTFYHLEQIILKHSAHERAVGMTAEKDGMDFFFGEKNSAERFTQFIGQHVPVRSKSARKLVSTDNHNNTANVKLTIVAEVAPICKDDIIVLDKRMAQLVGSSLVLVSRVTTQIHILDPLTARRAEITSEKYWKNPFEALDSASSMVDFIVLDVE---------------LLDRKASKDDDLMADVEVARVSDFGVNDTTFHVTTHLG-----RYLSAGDTVKGYDLGRCNFGTRQLYYLKDDLPDILLVRRVFPKKDAQDPKSK-KRHARKSL 412          
BLAST of mRNA_F-serratus_M_contig1459.3243.1 vs. uniprot
Match: G4Z7K2_PHYSP (60S ribosomal export protein NMD3 n=6 Tax=Phytophthora TaxID=4783 RepID=G4Z7K2_PHYSP)

HSP 1 Score: 324 bits (830), Expect = 7.640e-101
Identity = 177/428 (41.36%), Postives = 266/428 (62.15%), Query Frame = 0
Query:   96 ILCCLCGRSIQPNGANMCGACLKEQVDVTDGITKKGLVMIQCRRCLKWQTKHDN---------WTSFELESAPFLALTLKKIPGIAKQEVVDAKWVWTEPHSKRLKIKVTLRKEVLNKVMLQQEATVEFVVHNKQCNVCNKEFTNQTWKAVVQIRQKAGHKRTLLLLEQQILKADAHRKCIAVESVRGGMDVLFGTKNEAAEFVSFLGSVAPIRTRESTKLVSTDNHSNIRNTQHTVAVDIPTLCRDDLVVLPK----TVGNRLQGSLCLVHRITSVVQFLSPLSGETADMTADKYWRVSTDPLLTASSLVEFVVLDCEPSEYGSRGVGGGGKGASDGGAGKESPALWDVVVALASEVGNENHTFSVTTVLGGKGGRRGIEAGDALLGYDLRDKIFNEALLKGLSRELPDIVLVKRAPAPKARSKRYK 510
            I CC+CG  I+ N  NMC +C+  +VDV +GI  +   ++QCR CL++Q++            W   + ES   +AL LK IPG++K +++DA ++WTEPHSKR+K+++TL++EV N  ++Q    + FV+H+ +C  C K++ N TW+A+VQIRQKA HKRT L LEQ+ILK +AH+  I + +V+ GMD  FGTK+ A  F+ FL +  P+R++ S+KL+S + H++  N Q T +V++  +C+DDL+VLP+    + GN    +LC   R TS+V  L P+SG+ A++  D+YW++   PL T+S +VEF+VLD EP +   R +   G   + G   K    + DV VA AS+ G  + TF V T LGG      + AGD + GYDL   IF  +    L  ELPD+VLV++   P+   K +K
Sbjct:    3 ISCCMCGAQIEANAMNMCASCIATEVDVAEGIDTE-CELVQCRGCLRFQSRGKGQQYSSAGGAWLGCDWESKELMALCLKSIPGLSKAKLIDAGFIWTEPHSKRVKLRLTLQREVANHAVVQNTCVITFVIHSIKCPDCTKQYHNNTWRALVQIRQKAEHKRTFLRLEQEILKHNAHQDAIGITAVKEGMDFYFGTKSTAERFIHFLSAHVPMRSKSSSKLISENVHNSTANLQLTYSVELSPICKDDLLVLPRKFAQSCGNISDVTLCA--RTTSMVHLLDPVSGQKAELATDRYWKLPFLPLATSSDMVEFIVLDVEPVD--PRDLRQVGPAPTSGKGRKSKYVVADVEVARASDFGVNDTTFQVRTHLGGV-----LTAGDTVKGYDLSSAIFGSSQTYSLKNELPDLVLVRKV-YPRESGKHHK 419          
BLAST of mRNA_F-serratus_M_contig1459.3243.1 vs. uniprot
Match: A0A6G0XWA3_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWA3_9STRA)

HSP 1 Score: 323 bits (829), Expect = 1.440e-100
Identity = 184/431 (42.69%), Postives = 254/431 (58.93%), Query Frame = 0
Query:   92 ALPNILCCLCGRSIQPNGANMCGACLKEQVDVTDGITKKGLVMIQCRRCLKWQTKHDNWTSFELESAPFLALTLKKIPGIAKQEVVDAKWVWTEPHSKRLKIKVTLRKEVLNKVMLQQEATVEFVVHNKQCNVCNKEFTNQTWKAVVQIRQKAGHKRTLLLLEQQILKADAHRKCIAVESVRGGMDVLFGTKNEAAEFVSFLGSVAPIRTRESTKLVSTDNHSNIRNTQHTVAVDIPTLCRDDLVVLPKTVGNRLQG--SLCLVHRITSVVQFLSPLSGETADMTADKYWRVSTDPLLTASSLVEFVVLDCEPSEYGSRGVGGGGKGASDGGAGKESPALWDVVVALASEVGNENHTFSVTTVLGGKGGRRGIEAGDALLGYDLRDKIFNEALLKGLSRE---LPDIVLVKRAPAPKA--RSKRYKMRSLE 515
            +LP+ILCC+C   I+ N ANMC +CLK QVDVT+GI K+ ++M QCR CLKW      W S ELES   LA+ LKKI G+ K ++VDA W+WTEPHSKRLK+K+T++KEV+N  +LQQ   V F+V N+QC+ C   FTN +WKAVVQ+RQK  HKRT   LEQ ILK   H K   +ES   G+D  F  +N A  FV FL    PI  + + KL+S DNHSN  N + T AVDI  +C+DDLV LP  +  +L    SLCLV ++TS +  + P + + A++  +KYWR     L ++  L E+ VLD  P E   +    GG              L ++ +   S+ G  +  F   + LG       +  GD  +GYDL   +FN+A  K L      LPD+VLV++    +   R +++K++++E
Sbjct:    7 SLPDILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKE-IIMHQCRGCLKWS--RPQWVSAELESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFIVTFIVRNQQCDECQASFTNHSWKAVVQVRQKVEHKRTFFYLEQLILKHRVHEKTTNIESQPDGVDFFFVERNHALRFVDFLQETVPISLKTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIENEKYWRYPFKALRSSKQLTEYTVLDSTPMEIPMK----GGVPVRT----NRKTRLAELEIVRNSDFGVNDTRFQTVSHLGML-----LNVGDTAMGYDLVTSVFNDADTKPLDEAGITLPDVVLVRKQFLRRVQKRQRKWKLKTIE 421          
BLAST of mRNA_F-serratus_M_contig1459.3243.1 vs. uniprot
Match: A0A485KPH2_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPH2_9STRA)

HSP 1 Score: 321 bits (822), Expect = 1.780e-99
Identity = 183/430 (42.56%), Postives = 254/430 (59.07%), Query Frame = 0
Query:   93 LPNILCCLCGRSIQPNGANMCGACLKEQVDVTDGITKKGLVMIQCRRCLKWQTKHDNWTSFELESAPFLALTLKKIPGIAKQEVVDAKWVWTEPHSKRLKIKVTLRKEVLNKVMLQQEATVEFVVHNKQCNVCNKEFTNQTWKAVVQIRQKAGHKRTLLLLEQQILKADAHRKCIAVESVRGGMDVLFGTKNEAAEFVSFLGSVAPIRTRESTKLVSTDNHSNIRNTQHTVAVDIPTLCRDDLVVLPKTVGNRLQG--SLCLVHRITSVVQFLSPLSGETADMTADKYWRVSTDPLLTASSLVEFVVLDCEPSEYGSRGVGGGGKGASDGGAGKESPALWDVVVALASEVGNENHTFSVTTVLGGKGGRRGIEAGDALLGYDLRDKIFNEALLKGLSRE---LPDIVLVKRAPAPKA--RSKRYKMRSLE 515
            LPNILCC+C   I+ N ANMC +CLK QVDVT+GI K+ +++ QCR CLKW      W S +LES   LA+ LKKI G+ K ++VDA W+WTEPHSKRLK+K+T++KEV+N  +LQQ   V F+V N+QC+ C   FTN +WKAVVQ+RQK  HKRT   LEQ ILK   H K  ++ES   G+D  F  +N A  FV FL    PI  + + KL+S DNHSN  N + T  VDI  +C+DDLV LP  +  +L    SLCLV ++TS +  + P + + A++  DKYWR     L ++  L E+ VLD  P E     V GG    ++         L ++ V    + G  +  F   + LG       +  GD  +GYDL   +FN+   K L      LPD++LV++    +   RS+++K++++E
Sbjct:    9 LPNILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKE-IIIHQCRGCLKWS--RPPWVSADLESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFIVTFIVRNQQCDECQASFTNHSWKAVVQVRQKVEHKRTFFFLEQLILKHRVHEKTTSIESQPDGVDFFFVERNHALRFVDFLQETVPISLKTAKKLISADNHSNTANYKFTYMVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIDNDKYWRSPFKALCSSKKLTEYTVLDSTPMEIP---VKGGVPVRTN-----RKTRLAELEVVRNVDFGVNDTRFQTVSHLGML-----LNVGDTAMGYDLSTSVFNDLDTKPLDEAGITLPDVILVRKQFLRRVQKRSRKWKLKTIE 422          
BLAST of mRNA_F-serratus_M_contig1459.3243.1 vs. uniprot
Match: H3GC76_PHYRM (60S ribosomal export protein NMD3 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GC76_PHYRM)

HSP 1 Score: 319 bits (818), Expect = 3.590e-99
Identity = 173/416 (41.59%), Postives = 260/416 (62.50%), Query Frame = 0
Query:   96 ILCCLCGRSIQPNGANMCGACLKEQVDVTDGITKKGLVMIQCRRCLKWQTK----HDN-----WTSFELESAPFLALTLKKIPGIAKQEVVDAKWVWTEPHSKRLKIKVTLRKEVLNKVMLQQEATVEFVVHNKQCNVCNKEFTNQTWKAVVQIRQKAGHKRTLLLLEQQILKADAHRKCIAVESVRGGMDVLFGTKNEAAEFVSFLGSVAPIRTRESTKLVSTDNHSNIRNTQHTVAVDIPTLCRDDLVVLPKTV----GNRLQGSLCLVHRITSVVQFLSPLSGETADMTADKYWRVSTDPLLTASSLVEFVVLDCEPSEYGSRGVGGGGKGASDGGAGKESPALWDVVVALASEVGNENHTFSVTTVLGGKGGRRGIEAGDALLGYDLRDKIFNEALLKGLSRELPDIVLVKR 498
            I CC+CG  I+ N  NMC +C+  +VDV +GI      ++QCR CL++Q+K    H +     W + + ES   +AL LK IPG++K +++DA ++WTEPHSKR+K+++TL++EV N  ++Q      FV+ + +C  C K++ N TW+A+VQIRQKA HKRT L LEQ+ILK DAH+  I + +V+ GMD  FGTK+ A  F+ FL +  P+R++ S+KL+S + H+   N Q T ++++  +C+DDL++LP+ +    GN    +LC   R TS+V  + P+SG+ A++  D+YW++   PL T+S +VEFVVLD EP +  SR +   G   + G        + DV VA AS+ G  + TF + T LGG      + AGD + GYDL   IF  +    L  ELPD+VLV++
Sbjct:    3 ISCCMCGAQIEANAMNMCASCIASEVDVAEGIDTS-CDLVQCRGCLRFQSKGKAQHFSSATGAWLACDWESTELMALCLKSIPGLSKAKLIDAGFIWTEPHSKRVKLRLTLQREVANHALVQNSCVATFVITSVKCPDCTKQYHNNTWRALVQIRQKAEHKRTFLRLEQEILKHDAHKDAIGITAVKEGMDFYFGTKSSAERFIHFLAAHVPMRSKSSSKLISENVHNATANLQLTYSIELSPICKDDLLILPRKLAQSCGNISDVTLCA--RTTSMVHVVDPVSGQRAELATDRYWKLPFLPLATSSDMVEFVVLDVEPVD--SRDLRHVGPAPTSGRGRNSKFVVADVEVARASDFGVNDSTFHIRTHLGGV-----LSAGDTVKGYDLSSAIFGASQTYSLKEELPDLVLVRK 408          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1459.3243.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1R1_ECTSI3.010e-20963.3560S ribosomal export protein NMD3 n=1 Tax=Ectocarp... [more]
A0A836CPD6_9STRA1.090e-12549.7660S ribosomal export protein NMD3 n=1 Tax=Tribonem... [more]
T0RPV6_SAPDV3.840e-10443.0660S ribosomal export protein NMD3 n=4 Tax=Saproleg... [more]
A0A067BRX2_SAPPC8.410e-10444.4460S ribosomal export protein NMD3 n=2 Tax=Saproleg... [more]
A0A024UHG0_9STRA4.770e-10343.4960S ribosomal export protein NMD3 n=7 Tax=Aphanomy... [more]
A0A6G0WWT1_9STRA1.160e-10242.8260S ribosomal export protein NMD3 n=1 Tax=Aphanomy... [more]
G4Z7K2_PHYSP7.640e-10141.3660S ribosomal export protein NMD3 n=6 Tax=Phytopht... [more]
A0A6G0XWA3_9STRA1.440e-10042.6960S ribosomal export protein NMD3 n=1 Tax=Aphanomy... [more]
A0A485KPH2_9STRA1.780e-9942.5660S ribosomal export protein NMD3 n=1 Tax=Aphanomy... [more]
H3GC76_PHYRM3.590e-9941.5960S ribosomal export protein NMD3 n=1 Tax=Phytopht... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007064Nmd3, N-terminalPFAMPF04981NMD3coord: 98..327
e-value: 3.2E-65
score: 220.0
IPR039768Ribosomal export protein Nmd3PANTHERPTHR12746NONSENSE-MEDIATED MRNA DECAY PROTEIN 3coord: 90..557

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1459contigF-serratus_M_contig1459:183078..195859 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1459.3243.1mRNA_F-serratus_M_contig1459.3243.1Fucus serratus malemRNAF-serratus_M_contig1459 175182..196568 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1459.3243.1 ID=prot_F-serratus_M_contig1459.3243.1|Name=mRNA_F-serratus_M_contig1459.3243.1|organism=Fucus serratus male|type=polypeptide|length=580bp
MAVQEQNSISEEMPGLREAAAKAPLEEEQGRALETETETVGAAKADGTPV
GDRAPTPGGRVAMDGVEQRQAEDGFGSGATAAEGARDADGKALPNILCCL
CGRSIQPNGANMCGACLKEQVDVTDGITKKGLVMIQCRRCLKWQTKHDNW
TSFELESAPFLALTLKKIPGIAKQEVVDAKWVWTEPHSKRLKIKVTLRKE
VLNKVMLQQEATVEFVVHNKQCNVCNKEFTNQTWKAVVQIRQKAGHKRTL
LLLEQQILKADAHRKCIAVESVRGGMDVLFGTKNEAAEFVSFLGSVAPIR
TRESTKLVSTDNHSNIRNTQHTVAVDIPTLCRDDLVVLPKTVGNRLQGSL
CLVHRITSVVQFLSPLSGETADMTADKYWRVSTDPLLTASSLVEFVVLDC
EPSEYGSRGVGGGGKGASDGGAGKESPALWDVVVALASEVGNENHTFSVT
TVLGGKGGRRGIEAGDALLGYDLRDKIFNEALLKGLSRELPDIVLVKRAP
APKARSKRYKMRSLEDEARGDETSGSGSGSGKKGAGDVQDLDRLDEAQEV
AAIMEELAMDDDPRGEELLEVVEEDESQG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007064Nmd3_N
IPR039768Nmd3