prot_F-serratus_M_contig1456.3230.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1456.3230.1
Unique Nameprot_F-serratus_M_contig1456.3230.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length215
Homology
BLAST of mRNA_F-serratus_M_contig1456.3230.1 vs. uniprot
Match: D8LQ80_ECTSI (Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ80_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 4.170e-30
Identity = 58/75 (77.33%), Postives = 66/75 (88.00%), Query Frame = 0
Query:    2 PTYNDMVFESIKALKDRTGSSIQAIKKQITTTHPDLNFTQHQMRTALKKGVASGKFVKVKSSYKLSAEAKKPTPK 76
            PTYN MVF++IK LK+R GSSIQAIKK IT T+P LNFT HQMR+ALKKGV SGKF+K+K+SYKLSAEAKKP PK
Sbjct:    6 PTYNAMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPAPK 80          
BLAST of mRNA_F-serratus_M_contig1456.3230.1 vs. uniprot
Match: A0A6H5KCU1_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCU1_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 8.450e-27
Identity = 56/74 (75.68%), Postives = 63/74 (85.14%), Query Frame = 0
Query:    2 PTYNDMVFESIKALKDRTGSSIQAIKKQITTTHPDLNFTQHQMRTALKKGVASGKFVKVKSSYKLSAEAKKPTP 75
            PTYN MVF++IK LK+R GSSIQAIKK IT T+P LNFT HQMR ALKKGV SGKF+K+K+SYKLS EAKKP P
Sbjct:   99 PTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRGALKKGVESGKFIKMKASYKLSPEAKKPAP 172          
BLAST of mRNA_F-serratus_M_contig1456.3230.1 vs. uniprot
Match: D8LQ75_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ75_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 1.170e-26
Identity = 55/70 (78.57%), Postives = 63/70 (90.00%), Query Frame = 0
Query:    7 MVFESIKALKDRTGSSIQAIKKQITTTHPDLNFTQHQMRTALKKGVASGKFVKVKSSYKLSAEAKKPTPK 76
            MVF++IK+LK+R GSSIQAIKK IT T+P LNFT HQMR+ALKKGV +GKF+KVKSSYKLSAEAKKP PK
Sbjct:    1 MVFDAIKSLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVETGKFIKVKSSYKLSAEAKKPVPK 70          
BLAST of mRNA_F-serratus_M_contig1456.3230.1 vs. uniprot
Match: A0A6H5KST0_9PHAE (H15 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KST0_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 1.340e-26
Identity = 55/70 (78.57%), Postives = 62/70 (88.57%), Query Frame = 0
Query:    7 MVFESIKALKDRTGSSIQAIKKQITTTHPDLNFTQHQMRTALKKGVASGKFVKVKSSYKLSAEAKKPTPK 76
            MVF++IK LK+R GSSIQAIKK IT T+P LNFT HQMR+ALKKGV SGKFVK+K+SYKLSAEAKKP PK
Sbjct:    1 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPAPK 70          
BLAST of mRNA_F-serratus_M_contig1456.3230.1 vs. uniprot
Match: D7G4I5_ECTSI (H15 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4I5_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 8.370e-26
Identity = 53/72 (73.61%), Postives = 62/72 (86.11%), Query Frame = 0
Query:    2 PTYNDMVFESIKALKDRTGSSIQAIKKQITTTHPDLNFTQHQMRTALKKGVASGKFVKVKSSYKLSAEAKKP 73
            PTY+ MVF++IKALK+R GSS+ A+KKQI  T+P LNFT HQMR+ALKKG  SGKF+KVKSSYKLS EAKKP
Sbjct:    7 PTYSVMVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKP 78          
BLAST of mRNA_F-serratus_M_contig1456.3230.1 vs. uniprot
Match: A0A6H5JHR9_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHR9_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 1.160e-23
Identity = 50/67 (74.63%), Postives = 58/67 (86.57%), Query Frame = 0
Query:    7 MVFESIKALKDRTGSSIQAIKKQITTTHPDLNFTQHQMRTALKKGVASGKFVKVKSSYKLSAEAKKP 73
            MVF++IKALK+R GSS+ A+KKQI  T+P LNFT HQMR+ALKKG  SGKF+KVKSSYKLS EAKKP
Sbjct:    1 MVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKP 67          
BLAST of mRNA_F-serratus_M_contig1456.3230.1 vs. uniprot
Match: D8LJB8_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB8_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 1.070e-21
Identity = 49/77 (63.64%), Postives = 62/77 (80.52%), Query Frame = 0
Query:    1 MPTYNDMVFESIKALKDRTGSSIQAIKKQITTTHPDLNFTQHQMRTALKKGVASGKFVKVKSSYKLSAEAKKPTPKP 77
            MPTY++M  E++KALK+R GSS+ AIKK IT ++P L FT H MR+ALKKGV SGKF+KVK+SYKLSA  ++P  KP
Sbjct:    1 MPTYDEMTIEAVKALKERNGSSLFAIKKHITASYPSLTFTAHFMRSALKKGVESGKFIKVKNSYKLSAYRQEPAAKP 77          
BLAST of mRNA_F-serratus_M_contig1456.3230.1 vs. uniprot
Match: D8LMF1_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF1_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 1.430e-19
Identity = 45/73 (61.64%), Postives = 56/73 (76.71%), Query Frame = 0
Query:    1 MPTYNDMVFESIKALKDRTGSSIQAIKKQITTTHPDLNFTQHQMRTALKKGVASGKFVKVKSSYKLSAEAKKP 73
            MPTY++M   +I ALK+R GSS+ AIKK I  T+P LNF  HQ+R ALKKG  +G F+KVK+SYK+S EAKKP
Sbjct:    1 MPTYSEMAKVAILALKERNGSSVPAIKKHIQATYPTLNFLPHQLRGALKKGTETGTFIKVKASYKVSPEAKKP 73          
BLAST of mRNA_F-serratus_M_contig1456.3230.1 vs. uniprot
Match: A0A6H5JIM8_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM8_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 2.080e-19
Identity = 45/68 (66.18%), Postives = 57/68 (83.82%), Query Frame = 0
Query:    1 MPTYNDMVFESIKALKDRTGSSIQAIKKQITTTHPDLNFTQHQMRTALKKGVASGKFVKVKSSYKLSA 68
            MPTY++M  E++KALK+R GSS+ AIKK IT ++P L FT H +R+ALKKGV SGKF+KVK+SYKLSA
Sbjct:    1 MPTYDEMTVEAVKALKERNGSSLFAIKKHITASYPSLTFTGHFLRSALKKGVESGKFIKVKNSYKLSA 68          
BLAST of mRNA_F-serratus_M_contig1456.3230.1 vs. uniprot
Match: A0A835Z9C5_9STRA (H15 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9C5_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 4.980e-19
Identity = 46/79 (58.23%), Postives = 57/79 (72.15%), Query Frame = 0
Query:    1 MPTYNDMVFESIKALKDRTGSSIQAIKKQITTTHPDLNFTQHQMRTALKKGVASGKFVKVKSSYKLSAEAKKPTPKPKP 79
            MPTY +M+ ++I ALKDR+GSS  AIKK I   + DLNF QH +R ALKKGV SGK +K+K+SYKL+   KKP  K  P
Sbjct:    1 MPTYYEMIKDAIMALKDRSGSSPAAIKKYIEANNKDLNFAQHSLRMALKKGVESGKLIKIKASYKLADSEKKPVKKASP 79          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1456.3230.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ80_ECTSI4.170e-3077.33Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5KCU1_9PHAE8.450e-2775.68H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LQ75_ECTSI1.170e-2678.57H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KST0_9PHAE1.340e-2678.57H15 domain-containing protein n=6 Tax=Ectocarpus T... [more]
D7G4I5_ECTSI8.370e-2673.61H15 domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6H5JHR9_9PHAE1.160e-2374.63H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LJB8_ECTSI1.070e-2163.64H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LMF1_ECTSI1.430e-1961.64H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JIM8_9PHAE2.080e-1966.18H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835Z9C5_9STRA4.980e-1958.23H15 domain-containing protein n=1 Tax=Tribonema mi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005819Histone H5PRINTSPR00624HISTONEH5coord: 86..100
score: 31.85
coord: 136..155
score: 36.11
coord: 14..31
score: 54.32
IPR005818Linker histone H1/H5, domain H15SMARTSM00526h15plus2coord: 2..63
e-value: 1.0E-18
score: 78.2
IPR005818Linker histone H1/H5, domain H15PFAMPF00538Linker_histonecoord: 2..66
e-value: 2.6E-19
score: 69.3
IPR005818Linker histone H1/H5, domain H15PROSITEPS51504H15coord: 1..68
score: 26.524
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..82
e-value: 1.2E-17
score: 65.8
NoneNo IPR availablePANTHERPTHR11467:SF96coord: 2..171
NoneNo IPR availablePANTHERPTHR11467HISTONE H1coord: 2..171
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 2..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1456contigF-serratus_M_contig1456:225737..236081 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1456.3230.1mRNA_F-serratus_M_contig1456.3230.1Fucus serratus malemRNAF-serratus_M_contig1456 225545..237673 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1456.3230.1 ID=prot_F-serratus_M_contig1456.3230.1|Name=mRNA_F-serratus_M_contig1456.3230.1|organism=Fucus serratus male|type=polypeptide|length=215bp
MPTYNDMVFESIKALKDRTGSSIQAIKKQITTTHPDLNFTQHQMRTALKK
GVASGKFVKVKSSYKLSAEAKKPTPKPKPITKVVKRKVAAPKEDSLKEKK
ATATKESDVKKKTAAVSAASTKKKAPAAIAVSASSKKSKTTAPKKTKAVT
PPKKAKVATPRRRPRRPSSQKDRHRHQEGCRLEEDGWLHRGEKTRRREEE
IGSNRWCCQEDLFS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005819Histone_H5
IPR005818Histone_H1/H5_H15
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf