prot_F-serratus_M_contig1452.3213.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1452.3213.1
Unique Nameprot_F-serratus_M_contig1452.3213.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length174
Homology
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BLAST of mRNA_F-serratus_M_contig1452.3213.1 vs. uniprot
Match: D8LCF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCF4_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 1.380e-8
Identity = 31/36 (86.11%), Postives = 31/36 (86.11%), Query Frame = 0 
Query:   54 VTQVEIFLPYVIAALFGIGYGSVVAAGGWEALRVPA 89
            V  VEI LPYVI  LFGIGYGSVVAAGGWEALRVPA
Sbjct:   88 VMHVEILLPYVIGFLFGIGYGSVVAAGGWEALRVPA 123
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BLAST of mRNA_F-serratus_M_contig1452.3213.1 vs. uniprot
Match: A0A6H5KWZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWZ4_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 7.720e-8
Identity = 30/36 (83.33%), Postives = 30/36 (83.33%), Query Frame = 0 
Query:   54 VTQVEIFLPYVIAALFGIGYGSVVAAGGWEALRVPA 89
            V  VEI LPYVI  LFGIGYGSVVAAGGWEALR PA
Sbjct:  101 VMHVEILLPYVIGFLFGIGYGSVVAAGGWEALREPA 136
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1452.3213.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCF4_ECTSI1.380e-886.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWZ4_9PHAE7.720e-883.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..82
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..59
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 83..173
NoneNo IPR availableTMHMMTMhelixcoord: 60..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1452contigF-serratus_M_contig1452:24848..34290 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1452.3213.1mRNA_F-serratus_M_contig1452.3213.1Fucus serratus malemRNAF-serratus_M_contig1452 24639..34577 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1452.3213.1 ID=prot_F-serratus_M_contig1452.3213.1|Name=mRNA_F-serratus_M_contig1452.3213.1|organism=Fucus serratus male|type=polypeptide|length=174bp
MNQTVGISNPLPGGLRPLHPTQPVHLAVHPRIPSRHSSLSPISSGCRVVQ
DMRVTQVEIFLPYVIAALFGIGYGSVVAAGGWEALRVPAAWRRVTRLRSS
GDGVKCGHDISSASSKSGGSGSSGDDCSSSAGSDHSDARNADHLSFADQV
RARDSRDEAEAHTSADARLRLRR*
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