prot_F-serratus_M_contig1450.3202.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1450.3202.1
Unique Nameprot_F-serratus_M_contig1450.3202.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1079
Homology
BLAST of mRNA_F-serratus_M_contig1450.3202.1 vs. uniprot
Match: A0A6H5KTD5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD5_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 4.410e-36
Identity = 134/381 (35.17%), Postives = 179/381 (46.98%), Query Frame = 0
Query:   54 DARYSLGGKITAVNKKIAK-GGKRPRIVGDAIQSDLTGAINEFISKGCMKFSSFRDVWQSRKLSLLHHAVPSRFDGRVFLQQAFSVALDLVKEEPLPSAKVAGAAPTSR--------------------------------------------------------------------------------------SASASAARSAPAIPKLYAYKTGPGSLPFQIGALFAIYSLHGTQIFRSR-VPIRLSAQDMLALMQLRRSLKSAGPLASDALAVLARLVLG--CDGGCG---------------------------ALQPAVYSGPDTILYVDSRLQYTKTTRSNKKVLASQKEEIQTEKVMAAEAKAAASRAAARAR 317
            +A+  LGG++TA  +KI+K  G RPR++ DA++ DL   I  FIS+G M FSSFRDVWQSRKLS+LH AVP R +    LQ +FSVALDL+ ++   +A      P                                                                                         S +A+     P +P L   +TGPGSLPFQIGAL+A+Y LHGTQ+F S  +PIR+S++ MLAL +LR  LK+AGP A DALAVL+RLVLG  C+ G G                           ALQ A Y+GP ++ +V+S +  T  T        +Q +E++T+      A A  +RAAARAR
Sbjct:   13 NAQKQLGGRVTATYRKISKTAGSRPRMISDAVRHDLMDGIGHFISQGSMSFSSFRDVWQSRKLSVLHFAVPRRVNESALLQLSFSVALDLLMKDDEHNAVEDEMDPDGEXXXXXXXXXXXXXXXXXXXXXHRKXAXXGGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPTATPVDPPPTLPAL---ETGPGSLPFQIGALYALYCLHGTQLFSSAPMPIRVSSEAMLALSRLRWRLKAAGPQALDALAVLSRLVLGDGCNPGGGDGVXXXXXXXXXXXXXXXXXXXTRGGSALQAAAYTGPCSLAFVESNISTTSMTSK------AQAQEVETKSREVEAAMAKEARAAARAR 384          
BLAST of mRNA_F-serratus_M_contig1450.3202.1 vs. uniprot
Match: D7G2A2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A2_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 1.310e-25
Identity = 98/279 (35.13%), Postives = 134/279 (48.03%), Query Frame = 0
Query:   54 DARYSLGGKITAVNKKIAK-GGKRPRIVGDAIQSDLTGAINEFISKGCMKFSSFRDVWQSRKLSLLHHAVPSRFDGRVFLQQAFSVALDLVKEEPL-----------------------------------PSAKVA------------------GAAPTSRSA--------------------------------SASAARSAPAIPKLYAYKTGPGSLPFQIGALFAIYSLHGTQIFRSR-VPIRLSAQDMLALMQLR----RSLKSAGPLASDALA 241
            +A+  LGG++TA  +KI+K  G RPR++ DA++ DL   I +FIS+G M FSSFRDVWQSRKLS+LH AVP R +    LQ +FSVALDL+ ++                                     P  K A                  G   T ++A                                S+  A      P L A++TGPGSLPFQIGAL+A+Y LHGTQ+F S  +P+R+S + MLAL+Q +    RS ++   +A +A A
Sbjct:   13 NAQKQLGGRVTATYRKISKTAGARPRMISDAVRHDLMDGIGQFISQGSMSFSSFRDVWQSRKLSVLHFAVPRRVNENALLQLSFSVALDLLMKDDEHNAGEDEMDPDGEXXXXXXXXXXXXXXXXXRAKQPPRGKRADAGGRGXXXXGRSITGARGGGVTQQAAAXXXXXXXXXXXGDAAXXXXXXXXXXXXXXXXSSPTATPVDLPPTLPAHETGPGSLPFQIGALYALYCLHGTQLFSSAPMPVRVSPEAMLALVQAQEAEIRSREAEAAMAKEARA 291          
BLAST of mRNA_F-serratus_M_contig1450.3202.1 vs. uniprot
Match: A0A388MBW3_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388MBW3_CHABU)

HSP 1 Score: 59.3 bits (142), Expect = 1.460e-5
Identity = 44/162 (27.16%), Postives = 67/162 (41.36%), Query Frame = 0
Query:   87 DLTGAINEFISKGCMKFSSFRDVWQSRKLSLLHHAVPSRFDGRVFLQQAFSVALDLVKEEPLPSAKVAGAAPTSRSASASAARSAPAIPKLYAYKTGPG-SLPFQIGALFAIYSLHGTQIFRSRVPIRLSAQDMLALMQLRRSLKSAGPLASDALAVLARLV 247
            D+   + +F  +  ++F+ F+DVW+ R+ S +H   P       +LQ  +  AL                                           PG SL  ++G LFAIY+LHGTQI    V + +S ++M  L +L   L+     A D L VL R+V
Sbjct:   15 DMEDLLADFEKEASLQFADFKDVWRKRRFSFIHEGNPKGMPSEAYLQSLYGTALK---------------------------------------NLAPGASLFMRLGVLFAIYTLHGTQICNPLVLVYISLEEMRQLQRLADELRVRE--AFDGLFVLKRMV 135          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1450.3202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KTD5_9PHAE4.410e-3635.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2A2_ECTSI1.310e-2535.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A388MBW3_CHABU1.460e-527.16Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 521..541
IPR019188Small nuclear RNA activating complex (SNAPc), subunit SNAP43PFAMPF09808SNAPc_SNAP43coord: 85..247
e-value: 2.8E-16
score: 60.0
IPR019188Small nuclear RNA activating complex (SNAPc), subunit SNAP43PANTHERPTHR15131SMALL NUCLEAR RNA ACTIVATING COMPLEX, POLYPEPTIDE 1coord: 74..811

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1450contigF-serratus_M_contig1450:56962..72614 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1450.3202.1mRNA_F-serratus_M_contig1450.3202.1Fucus serratus malemRNAF-serratus_M_contig1450 56948..72989 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1450.3202.1 ID=prot_F-serratus_M_contig1450.3202.1|Name=mRNA_F-serratus_M_contig1450.3202.1|organism=Fucus serratus male|type=polypeptide|length=1079bp
MEQALEEEDVSDRTDESMRDDDPESDEDDDMVDDRDVEDSLAGSGSKKRP
TYKDARYSLGGKITAVNKKIAKGGKRPRIVGDAIQSDLTGAINEFISKGC
MKFSSFRDVWQSRKLSLLHHAVPSRFDGRVFLQQAFSVALDLVKEEPLPS
AKVAGAAPTSRSASASAARSAPAIPKLYAYKTGPGSLPFQIGALFAIYSL
HGTQIFRSRVPIRLSAQDMLALMQLRRSLKSAGPLASDALAVLARLVLGC
DGGCGALQPAVYSGPDTILYVDSRLQYTKTTRSNKKVLASQKEEIQTEKV
MAAEAKAAASRAAARARGGDAVSRTKTADAARSLLGLAQRLSSSYAAYEK
ALEYTRVGGAHASRNDNQEIVDGGGNPSINRRSKLLREVERFVERGIPDV
PAANIHGWELLPRSSPSTGTVNPSRKAPWTLSMRFPELPDLPRMSGVSQV
EKAKSSNNAGARATDCAEGAQVTEEISGRGEVSITGRRERPPGSGTGGNV
GNGTSLRTIRRIGVRDHLRLVEKSLQEAEEQDKNNEGATAENREGGASGI
DTSAEWRGGGLSTSRTNSELNGSSASGGVLKLPGGLGNVPRIRGPGSSTE
KTAGGDESGDGRSIPGASAGAGVAKLPGGLGNVSRVRDAGDSAEKSAGHD
ESNVGRHTLGDSSVSIGAGGAVKLPGGLGNRDRKGKGKSRDQNDRQGAVG
VDGVQRSAARDGSRVRGKRKQSGLAAECYDGHAPGEGESEGSSETSREQG
RGRPPRSTCLSTGMTTGYDSRRIVQGKGNASNPAAANGSPAGDAESPSSK
DQEKGQGSREDVDSSGDDPRIASLFRFAAELSSSPPVSSGGSTITKKTQE
AHKRKRTVAVSRPDTPPTSLCATRRDESQTRVDASTQLQSTNNSPGLAAI
ASAKKTKLTDYLTPSSAAERDATRTNNTGEITVDMRAGETSSDSASDDGD
DVEQPSSTKGTALGYGGPRKDCDTSGQGSDVGADKNVAGTAKQGTKGATT
TDCRGEEQLQQVRNKGPPQVKVSNTDDDSHPARVPKDIRAKAPEVKAIAT
TTTPDGAGSQTQNMGETSSDSDGGEDQD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019188SNAPc_SNAP43