prot_F-serratus_M_contig1438.3135.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1438.3135.1
Unique Nameprot_F-serratus_M_contig1438.3135.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length217
Homology
BLAST of mRNA_F-serratus_M_contig1438.3135.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 1.210e-55
Identity = 100/206 (48.54%), Postives = 135/206 (65.53%), Query Frame = 0
Query:    4 FPYREAVGALMWTATMTRPDIACVVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWRSRMQEVTAAGTSEAEYVALAEAVKGVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAKRVRVAYVRSEDQHADLLTK 208
            +P+RE +G+LMW AT TRPDIA  VRAVAR+C +P   H +A + I  Y++ T D GI +  G   GL ME + D+D+ +    RRSVSG ++M   G ISW SR Q+     T+EAEYV+LA+ +K VLFLRQV  FM P   +  + VFEDN+GAI+LA N  ++  +KHIDV+HH +R+    K + + +V S  QHAD LTK
Sbjct:  215 WPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTK 420          
BLAST of mRNA_F-serratus_M_contig1438.3135.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 1.540e-55
Identity = 97/206 (47.09%), Postives = 135/206 (65.53%), Query Frame = 0
Query:    4 FPYREAVGALMWTATMTRPDIACVVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWRSRMQEVTAAGTSEAEYVALAEAVKGVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAKRVRVAYVRSEDQHADLLTK 208
            +P+RE +G+LMW AT TRPDIA  VRAVAR+C +P   H +A + I  Y++ T D GI +  G   GL ME + D+D+ +    RRSVSG ++M   G +SW SR Q+     T+EAEYV+LA+ +K VLFLRQV+ F+ P   +  + V EDN+GAI+LA N  ++  +KHIDV+HH +R+    K + + +V S  QHAD LTK
Sbjct:   31 WPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCMSWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVRRFVLPEAGMPCIPVLEDNQGAIQLAQNPISNSTSKHIDVRHHFIRELVRRKEISIFHVESAYQHADFLTK 236          
BLAST of mRNA_F-serratus_M_contig1438.3135.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 3.440e-54
Identity = 100/206 (48.54%), Postives = 135/206 (65.53%), Query Frame = 0
Query:    4 FPYREAVGALMWTATMTRPDIACVVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWRSRMQEVTAAGTSEAEYVALAEAVKGVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAKRVRVAYVRSEDQHADLLTK 208
            +P+RE +G+LMW AT TRPDIA  VRAVAR+C +P   H +A + I  Y++ T D GI +  G   GL ME + D+D+ +    RRSVSG ++M   G ISW SR Q+     T+EAEYV+LA+ +K VLFLRQV  FM P   +  + VFEDN+GAI+LA N  ++  +KHIDV+HH +R+    K + + +V S  QHAD LTK
Sbjct:  389 WPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTK 594          
BLAST of mRNA_F-serratus_M_contig1438.3135.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 3.830e-54
Identity = 99/207 (47.83%), Postives = 134/207 (64.73%), Query Frame = 0
Query:    4 FPYREAVGALMWTATMTRPDIACVVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWRSRMQEVTAAGTSEAEYVALAEAVKGVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRD-ASDAKRVRVAYVRSEDQHADLLTK 208
            +P+RE +G+LMW AT TRPDIA  VRAVAR+C +P   H +A + I  Y++ T D GI +  G   GL ME + D+D+ +    RRSVSG ++M   G ISW SR Q+     T+EAEYV+LA+ +K VLFLRQV  FM P   +  + VFEDN+GAI+LA N  ++   KHIDV+HH +R+     K + + +V S  QHAD LT+
Sbjct:  114 WPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDSGITFRRGSIAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNLKHIDVRHHFIRELVVGRKEISIFHVESAYQHADFLTR 320          
BLAST of mRNA_F-serratus_M_contig1438.3135.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 8.820e-54
Identity = 99/207 (47.83%), Postives = 133/207 (64.25%), Query Frame = 0
Query:    4 FPYREAVGALMWTATMTRPDIACVVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWRSRMQEVTAAGTSEAEYVALAEAVKGVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAKRVRVAYVRSEDQHADLLTKT 209
            FP+RE VG+LMW AT TRPDIA  VRAVAR+C +P   H  A M I  Y   T  +GI++  G   G  ++ Y D+DF +    RRSVSG ++    GA+SW SR Q+     T+EAEYVAL + VK +LFLRQ+  FM P + +  + VFEDN+GAI+LA N  ++  +KHIDV+HH +R+  + K + V +V S  Q AD LTK+
Sbjct:  239 FPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKS 445          
BLAST of mRNA_F-serratus_M_contig1438.3135.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 8.950e-54
Identity = 96/210 (45.71%), Postives = 133/210 (63.33%), Query Frame = 0
Query:    5 PYREAVGALMWTATMTRPDIACVVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWRSRMQEVTAAGTSEAEYVALAEAVKGVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAKRVRVAYVRSEDQHADLLTKTARRE 213
            P+RE VG+LMW AT TRPDIA  VRAVAR+C +P   H KA + I  Y+  T   GI +  G   G+ M+ + D+D+ +    RRSVSG ++M   G ++W SR Q+     T+EAEYVA+A+ +K VLFLRQV  FM P   +  + VFEDN+GAI++A N   +  +KHIDV+HH +R+  + K + +  V +  QHAD LTK   +E
Sbjct:   99 PFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITNVPTPFQHADFLTKAISKE 308          
BLAST of mRNA_F-serratus_M_contig1438.3135.1 vs. uniprot
Match: A0A6H5K8K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K2_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 1.020e-53
Identity = 97/210 (46.19%), Postives = 133/210 (63.33%), Query Frame = 0
Query:    5 PYREAVGALMWTATMTRPDIACVVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWRSRMQEVTAAGTSEAEYVALAEAVKGVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAKRVRVAYVRSEDQHADLLTKTARRE 213
            P+RE VG++MW AT TRPDIA  VRAVAR+C +P   H KA + I  Y+  T   GI +  G   G+ M+ + D+D+      RRSVSG ++M   G ++W SR Q+     T+EAEYVA+A+ +K VLFLRQV  FM P   +  + VFEDN+GAI++A N   +  +KHID +HHL+R   + K + + +V SE QHAD LTK   +E
Sbjct:   71 PFRELVGSVMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYVRKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQVAHNPITNSNSKHIDERHHLIRKLVERKEISITHVTSEFQHADFLTKAISKE 280          
BLAST of mRNA_F-serratus_M_contig1438.3135.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 1.320e-53
Identity = 95/210 (45.24%), Postives = 134/210 (63.81%), Query Frame = 0
Query:    5 PYREAVGALMWTATMTRPDIACVVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWRSRMQEVTAAGTSEAEYVALAEAVKGVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAKRVRVAYVRSEDQHADLLTKTARRE 213
            P+RE VG+LMW AT TRPDIA  VRAVAR+C +P   H KA + I  Y+  T   GI +  G   G+ M+ + D+D+ +    RRSVSG ++M   G ++W SR Q+     T+EAEYVA+A+ +K VLFLRQV  FM P   +  + VFEDN+GAI++  N   +  +KHIDV+HH +R+  + K + + +V ++ QHAD LTK   +E
Sbjct:  154 PFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAISKE 363          
BLAST of mRNA_F-serratus_M_contig1438.3135.1 vs. uniprot
Match: A0A6H5KLT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLT9_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 1.320e-53
Identity = 99/207 (47.83%), Postives = 132/207 (63.77%), Query Frame = 0
Query:    4 FPYREAVGALMWTATMTRPDIACVVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWRSRMQEVTAAGTSEAEYVALAEAVKGVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAKRVRVAYVRSEDQHADLLTKT 209
            FP+RE VG+LMW AT TRPDIA  VRAVAR+C +P   H  A M I      T  +GI++  G   GL ++ Y D+DF +    RRSVSG ++    GA+SW SR Q+     T+EAEYVAL + VK +LFLRQ+  FM P + +    VFEDN+GAI+LA N  ++  +KHIDV+HH +R+  + K + V +V S  Q AD LTK+
Sbjct:  103 FPFRELVGSLMWLATQTRPDIANAVRAVARYCASPTLVHWNAAMDILGDARRTSHFGISFQRGTVEGLSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCNPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKS 309          
BLAST of mRNA_F-serratus_M_contig1438.3135.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 1.450e-53
Identity = 96/212 (45.28%), Postives = 135/212 (63.68%), Query Frame = 0
Query:    5 PYREAVGALMWTATMTRPDIACVVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWRSRMQEVTAAGTSEAEYVALAEAVKGVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAKRVRVAYVRSEDQHADLLTKTARREKV 215
            P+RE VG+LMW AT TRPDIA  VRAVAR+C +P   H KA + I  Y+  T   GI +  G   G+ M+ + D+D+ +    RRSVSG ++M   G ++W SR Q+     T+EAEYVA+A+ +K VLFLRQV  FM P   +  + VFEDN+GAI++A N   +  +KHIDV+HH +R+  + K + + +V +  QHAD LTK   +E +
Sbjct:  216 PFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTHFQHADFLTKAISKESL 427          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1438.3135.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLN0_9PHAE1.210e-5548.54Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JTK6_9PHAE1.540e-5547.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQB8_9PHAE3.440e-5448.54Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KR24_9PHAE3.830e-5447.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFG2_9PHAE8.820e-5447.83Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KP70_9PHAE8.950e-5445.71Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8K2_9PHAE1.020e-5346.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4G9_9PHAE1.320e-5345.24Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KLT9_9PHAE1.320e-5347.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEF2_9PHAE1.450e-5345.28Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 6..214
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 6..214
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..216
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1438contigF-serratus_M_contig1438:71074..71724 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1438.3135.1mRNA_F-serratus_M_contig1438.3135.1Fucus serratus malemRNAF-serratus_M_contig1438 70634..71724 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1438.3135.1 ID=prot_F-serratus_M_contig1438.3135.1|Name=mRNA_F-serratus_M_contig1438.3135.1|organism=Fucus serratus male|type=polypeptide|length=217bp
MKMFPYREAVGALMWTATMTRPDIACVVRAVARFCENPGPAHKKAVMKIF
QYLLHTKDWGIAYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKG
AISWRSRMQEVTAAGTSEAEYVALAEAVKGVLFLRQVQEFMEPSMRVGAV
NVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAKRVRVAYVRSED
QHADLLTKTARREKVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like