mRNA_F-serratus_M_contig1438.3135.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1438.3135.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 196 bits (497), Expect = 4.550e-55 Identity = 102/214 (47.66%), Postives = 140/214 (65.42%), Query Frame = 3
Query: 426 EEKEEMKMFPYREAVGALMWTATMTRPDIACVVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWRSRMQEVTAAGTSEAEYVALAEAVKGVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAKRVRVAYVRSEDQHADLLTK 1064
++ EE+ +P+RE +G+LMW AT TRPDIA VRAVAR+C +P H +A + I Y++ T D GI + G GL ME + D+D+ + RRSVSG ++M G ISW SR Q+ T+EAEYV+LA+ +K VLFLRQV FM P + + VFEDN+GAI+LA N ++ +KHIDV+HH +R+ K + + +V S QHAD LTK
Sbjct: 207 DQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTK 420
BLAST of mRNA_F-serratus_M_contig1438.3135.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE) HSP 1 Score: 191 bits (485), Expect = 5.290e-55 Identity = 99/214 (46.26%), Postives = 140/214 (65.42%), Query Frame = 3
Query: 426 EEKEEMKMFPYREAVGALMWTATMTRPDIACVVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWRSRMQEVTAAGTSEAEYVALAEAVKGVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAKRVRVAYVRSEDQHADLLTK 1064
++ EE+ +P+RE +G+LMW AT TRPDIA VRAVAR+C +P H +A + I Y++ T D GI + G GL ME + D+D+ + RRSVSG ++M G +SW SR Q+ T+EAEYV+LA+ +K VLFLRQV+ F+ P + + V EDN+GAI+LA N ++ +KHIDV+HH +R+ K + + +V S QHAD LTK
Sbjct: 23 DQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCMSWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVRRFVLPEAGMPCIPVLEDNQGAIQLAQNPISNSTSKHIDVRHHFIRELVRRKEISIFHVESAYQHADFLTK 236
BLAST of mRNA_F-serratus_M_contig1438.3135.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE) HSP 1 Score: 189 bits (479), Expect = 1.300e-53 Identity = 101/215 (46.98%), Postives = 139/215 (64.65%), Query Frame = 3
Query: 426 EEKEEMKMFPYREAVGALMWTATMTRPDIACVVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWRSRMQEVTAAGTSEAEYVALAEAVKGVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRD-ASDAKRVRVAYVRSEDQHADLLTK 1064
++ EE+ +P+RE +G+LMW AT TRPDIA VRAVAR+C +P H +A + I Y++ T D GI + G GL ME + D+D+ + RRSVSG ++M G ISW SR Q+ T+EAEYV+LA+ +K VLFLRQV FM P + + VFEDN+GAI+LA N ++ KHIDV+HH +R+ K + + +V S QHAD LT+
Sbjct: 106 DQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDSGITFRRGSIAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNLKHIDVRHHFIRELVVGRKEISIFHVESAYQHADFLTR 320
BLAST of mRNA_F-serratus_M_contig1438.3135.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE) HSP 1 Score: 196 bits (497), Expect = 1.400e-53 Identity = 102/214 (47.66%), Postives = 140/214 (65.42%), Query Frame = 3
Query: 426 EEKEEMKMFPYREAVGALMWTATMTRPDIACVVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWRSRMQEVTAAGTSEAEYVALAEAVKGVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAKRVRVAYVRSEDQHADLLTK 1064
++ EE+ +P+RE +G+LMW AT TRPDIA VRAVAR+C +P H +A + I Y++ T D GI + G GL ME + D+D+ + RRSVSG ++M G ISW SR Q+ T+EAEYV+LA+ +K VLFLRQV FM P + + VFEDN+GAI+LA N ++ +KHIDV+HH +R+ K + + +V S QHAD LTK
Sbjct: 381 DQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTK 594
BLAST of mRNA_F-serratus_M_contig1438.3135.1 vs. uniprot
Match: A0A6H5K8K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K2_9PHAE) HSP 1 Score: 186 bits (471), Expect = 1.330e-52 Identity = 105/248 (42.34%), Postives = 147/248 (59.27%), Query Frame = 3
Query: 339 KEVRCQEGSQGTGCVGVPTLSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACVVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWRSRMQEVTAAGTSEAEYVALAEAVKGVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAKRVRVAYVRSEDQHADLLTKTARRE 1079
+E+ Q G + V +P K + +E E P+RE VG++MW AT TRPDIA VRAVAR+C +P H KA + I Y+ T GI + G G+ M+ + D+D+ RRSVSG ++M G ++W SR Q+ T+EAEYVA+A+ +K VLFLRQV FM P + + VFEDN+GAI++A N + +KHID +HHL+R + K + + +V SE QHAD LTK +E
Sbjct: 36 EELAAQYGVEWGKSVPLPVSVKLTDL---DENEACADVPFRELVGSVMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYVRKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQVAHNPITNSNSKHIDERHHLIRKLVERKEISITHVTSEFQHADFLTKAISKE 280
BLAST of mRNA_F-serratus_M_contig1438.3135.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE) HSP 1 Score: 185 bits (470), Expect = 2.330e-52 Identity = 98/219 (44.75%), Postives = 136/219 (62.10%), Query Frame = 3
Query: 426 EEKEEMKMFPYREAVGALMWTATMTRPDIACVVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWRSRMQEVTAAGTSEAEYVALAEAVKGVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAKRVRVAYVRSEDQHADLLTKTARRE 1079
+E E P+RE VG+LMW AT TRPDIA VRAVAR+C +P H KA + I Y+ T GI + G G+ M+ + D+D+ + RRSVSG ++M G ++W SR Q+ T+EAEYVA+A+ +K VLFLRQV FM P + + VFEDN+GAI++A N + +KHIDV+HH +R+ + K + + V + QHAD LTK +E
Sbjct: 90 DENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITNVPTPFQHADFLTKAISKE 308
BLAST of mRNA_F-serratus_M_contig1438.3135.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE) HSP 1 Score: 186 bits (473), Expect = 3.520e-52 Identity = 97/219 (44.29%), Postives = 137/219 (62.56%), Query Frame = 3
Query: 426 EEKEEMKMFPYREAVGALMWTATMTRPDIACVVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWRSRMQEVTAAGTSEAEYVALAEAVKGVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAKRVRVAYVRSEDQHADLLTKTARRE 1079
+E E P+RE VG+LMW AT TRPDIA VRAVAR+C +P H KA + I Y+ T GI + G G+ M+ + D+D+ + RRSVSG ++M G ++W SR Q+ T+EAEYVA+A+ +K VLFLRQV FM P + + VFEDN+GAI++ N + +KHIDV+HH +R+ + K + + +V ++ QHAD LTK +E
Sbjct: 145 DENEASADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAISKE 363
BLAST of mRNA_F-serratus_M_contig1438.3135.1 vs. uniprot
Match: A0A6A3GI70_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A6A3GI70_9STRA) HSP 1 Score: 185 bits (469), Expect = 3.560e-52 Identity = 101/223 (45.29%), Postives = 147/223 (65.92%), Query Frame = 3
Query: 396 LSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACVVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGIAYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWRSRMQEVTAAGTSEAEYVALAEAVKGVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAKRVRVAYVRSEDQHADLLTK 1064
L+KADEPQ+ E+K +MK PYR VG+LM+ A TRPDI+ V ++RF ENPG H A +K+ +YLL TKD GI Y G G +EAY+D+D+ D RRSVSG +LML + WRS Q+ A ++EAEY+AL++ VK +++R++ + + +VGA ++EDN+GA+ LA N RTKHID+++H +R+ + V + YV + +Q AD +TK
Sbjct: 80 LTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAE-QVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIREKVVSDEVELQYVDTNNQLADFMTK 300
BLAST of mRNA_F-serratus_M_contig1438.3135.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE) HSP 1 Score: 188 bits (477), Expect = 3.950e-52 Identity = 98/221 (44.34%), Postives = 138/221 (62.44%), Query Frame = 3
Query: 426 EEKEEMKMFPYREAVGALMWTATMTRPDIACVVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWRSRMQEVTAAGTSEAEYVALAEAVKGVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAKRVRVAYVRSEDQHADLLTKTARREKV 1085
+E E P+RE VG+LMW AT TRPDIA VRAVAR+C +P H KA + I Y+ T GI + G G+ M+ + D+D+ + RRSVSG ++M G ++W SR Q+ T+EAEYVA+A+ +K VLFLRQV FM P + + VFEDN+GAI++A N + +KHIDV+HH +R+ + K + + +V + QHAD LTK +E +
Sbjct: 207 DENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTHFQHADFLTKAISKESL 427
BLAST of mRNA_F-serratus_M_contig1438.3135.1 vs. uniprot
Match: A0A6A3SPB0_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SPB0_9STRA) HSP 1 Score: 183 bits (464), Expect = 6.310e-52 Identity = 100/223 (44.84%), Postives = 146/223 (65.47%), Query Frame = 3
Query: 396 LSKADEPQSPEEKEEMKMFPYREAVGALMWTATMTRPDIACVVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGIAYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWRSRMQEVTAAGTSEAEYVALAEAVKGVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAKRVRVAYVRSEDQHADLLTK 1064
L+KADEPQ+ E+K +MK PYR VG+LM+ A TRPDI+ V ++RF ENPG H A +K+ +YLL TKD GI Y G G +EAY+D+D+ D RRSVSG +LML + WRS Q+ A ++E EY+AL++ VK +++R++ + +VGA ++EDN+GA+ LA N RTKHID+++H +R+ + V + YV +++Q AD +TK
Sbjct: 39 LTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEGEYMALSDCVKECVWMRRLLVGIGAE-QVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIREKVVSNEVELEYVDTKNQLADFMTK 259 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1438.3135.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1438.3135.1 >prot_F-serratus_M_contig1438.3135.1 ID=prot_F-serratus_M_contig1438.3135.1|Name=mRNA_F-serratus_M_contig1438.3135.1|organism=Fucus serratus male|type=polypeptide|length=217bp MKMFPYREAVGALMWTATMTRPDIACVVRAVARFCENPGPAHKKAVMKIFback to top mRNA from alignment at F-serratus_M_contig1438:70634..71724+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1438.3135.1 ID=mRNA_F-serratus_M_contig1438.3135.1|Name=mRNA_F-serratus_M_contig1438.3135.1|organism=Fucus serratus male|type=mRNA|length=1091bp|location=Sequence derived from alignment at F-serratus_M_contig1438:70634..71724+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1438:70634..71724+ >mRNA_F-serratus_M_contig1438.3135.1 ID=mRNA_F-serratus_M_contig1438.3135.1|Name=mRNA_F-serratus_M_contig1438.3135.1|organism=Fucus serratus male|type=CDS|length=1302bp|location=Sequence derived from alignment at F-serratus_M_contig1438:70634..71724+ (Fucus serratus male)back to top |