prot_F-serratus_M_contig143.3078.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig143.3078.1
Unique Nameprot_F-serratus_M_contig143.3078.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length103
Homology
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BLAST of mRNA_F-serratus_M_contig143.3078.1 vs. uniprot
Match: D8LTN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTN9_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 1.180e-17
Identity = 47/74 (63.51%), Postives = 58/74 (78.38%), Query Frame = 0 
Query:   23 PSPGVIGGAAVVGAGVGALVGGPLIAIGLGATAAGLSLSDNKAGDVARSTGRAGMAVVNKGKELNRRYGFGEKV 96
            P  GV+GGAA+VGA  G L+ GPL+AIGLGA AA   L  ++AGDVARSTG+AG+AVV KGKE+N +YG  +KV
Sbjct:   16 PPAGVVGGAALVGATTGLLLSGPLVAIGLGAGAAACCLRRDQAGDVARSTGQAGLAVVEKGKEINTQYGVADKV 89
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig143.3078.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTN9_ECTSI1.180e-1763.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 27..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig143contigF-serratus_M_contig143:582552..587436 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig143.3078.1mRNA_F-serratus_M_contig143.3078.1Fucus serratus malemRNAF-serratus_M_contig143 581087..587748 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig143.3078.1 ID=prot_F-serratus_M_contig143.3078.1|Name=mRNA_F-serratus_M_contig143.3078.1|organism=Fucus serratus male|type=polypeptide|length=103bp
MSHNNVNGRHNGGGPGQLGRGKPSPGVIGGAAVVGAGVGALVGGPLIAIG
LGATAAGLSLSDNKAGDVARSTGRAGMAVVNKGKELNRRYGFGEKVDREH
RR*
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