prot_F-serratus_M_contig143.3072.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig143.3072.1
Unique Nameprot_F-serratus_M_contig143.3072.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length110
Homology
BLAST of mRNA_F-serratus_M_contig143.3072.1 vs. uniprot
Match: D8LTP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP1_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 1.980e-42
Identity = 73/105 (69.52%), Postives = 87/105 (82.86%), Query Frame = 0
Query:    6 RDARASLTAAYNALFASFTASTLQTAGRIALGLHIGGLLKTHVLDLFGPILDPVGYRLDLNTYFDEQNISYVGKANAMGGAPNMILNVVCYSVVFVLFCVHSNIA 110
            R AR+S    YNAL A FTAST+QTAG+  LGLHIG LLKTHVLDLFGPI+DP+GYRLDL+ YFDE++I Y+GKANAMGG  NM LN++CYSVVF +F VH ++A
Sbjct:  165 RQARSSFNGVYNALIACFTASTIQTAGQFTLGLHIGNLLKTHVLDLFGPIIDPIGYRLDLSPYFDEEDIPYMGKANAMGGPRNMALNILCYSVVFAVFRVHPSVA 269          
BLAST of mRNA_F-serratus_M_contig143.3072.1 vs. uniprot
Match: A0A6H5JP85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP85_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 9.810e-39
Identity = 73/110 (66.36%), Postives = 87/110 (79.09%), Query Frame = 0
Query:    6 RDARASLTAAYNALFASFTASTLQTAGRIALGLHIGGLLK-----THVLDLFGPILDPVGYRLDLNTYFDEQNISYVGKANAMGGAPNMILNVVCYSVVFVLFCVHSNIA 110
            R AR+S    YNAL ASFTAST+QTAG+  LGLHIG LLK     THVLDLFGPI+DP+GYRLDL+ YFDE++I Y+GKANAM G  NM LN+ CYSVVF++F VH ++A
Sbjct:  367 RQARSSFNGVYNALIASFTASTIQTAGQFTLGLHIGNLLKASYLLTHVLDLFGPIIDPIGYRLDLSPYFDEEDIPYMGKANAMDGPRNMALNIFCYSVVFIVFQVHPSVA 476          
BLAST of mRNA_F-serratus_M_contig143.3072.1 vs. uniprot
Match: A0A6H5JS93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS93_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 3.100e-37
Identity = 64/108 (59.26%), Postives = 84/108 (77.78%), Query Frame = 0
Query:    3 LDLRDARASLTAAYNALFASFTASTLQTAGRIALGLHIGGLLKTHVLDLFGPILDPVGYRLDLNTYFDEQNISYVGKANAMGGAPNMILNVVCYSVVFVLFCVHSNIA 110
            +D  +AR+SL   YN L  SFTAST QTAG+IALGLH+G LLKTH+LDLFGP++DP+GYRLDL TY+DE+ I Y+G ANAM G  N+ +N+ CY++VFV+   H  ++
Sbjct:   34 VDPDNARSSLRGLYNGLITSFTASTYQTAGQIALGLHVGTLLKTHLLDLFGPMVDPIGYRLDLTTYYDEEEIPYMGNANAMDGPHNLAMNIFCYALVFVVIRAHPPLS 141          
BLAST of mRNA_F-serratus_M_contig143.3072.1 vs. uniprot
Match: D8LTP3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP3_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 2.440e-34
Identity = 63/108 (58.33%), Postives = 81/108 (75.00%), Query Frame = 0
Query:    3 LDLRDARASLTAAYNALFASFTASTLQTAGRIALGLHIGGLLKTHVLDLFGPILDPVGYRLDLNTYFDEQNISYVGKANAMGGAPNMILNVVCYSVVFVLFCVHSNIA 110
            +D  +AR+SL   Y+ L  SFTAST QTAG+IALGLH+G LLKTH+LDLFGP+LDP+GYRLDL TY+DE  I Y+G  NAM G  N+ +N+ CY++VF +   H  +A
Sbjct:  169 VDPDNARSSLRGLYSGLITSFTASTYQTAGQIALGLHVGTLLKTHLLDLFGPMLDPIGYRLDLTTYYDEAEIPYMGNPNAMDGPHNLAMNIFCYALVFAVIRAHPPLA 276          
BLAST of mRNA_F-serratus_M_contig143.3072.1 vs. uniprot
Match: D7FJ41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ41_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 1.090e-10
Identity = 36/95 (37.89%), Postives = 54/95 (56.84%), Query Frame = 0
Query:    2 ALDLRDARASLTAAYNALFASFTASTLQTAGRIALGLHIGGLLKTHVLDLFGPILDPVGYRLDLNTYFDEQNISYVGKANAMGGAPNMILNVVCY 96
            AL  +   AS+ + Y A+  S TAST + AG++ L L  GGL+K  + DL GP++DP+GY+++L TY           AN M G  N+ + +  Y
Sbjct:  242 ALSFKKLAASVNSLYAAVITSITASTFKRAGQLTLALTCGGLIKRALFDLLGPVIDPIGYQIELETYV----------ANIMRGPANLYITLAGY 326          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig143.3072.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LTP1_ECTSI1.980e-4269.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP85_9PHAE9.810e-3966.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JS93_9PHAE3.100e-3759.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTP3_ECTSI2.440e-3458.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FJ41_ECTSI1.090e-1037.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..88
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 89..109
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 110..110
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 83..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig143contigF-serratus_M_contig143:415136..418028 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig143.3072.1mRNA_F-serratus_M_contig143.3072.1Fucus serratus malemRNAF-serratus_M_contig143 415136..418029 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig143.3072.1 ID=prot_F-serratus_M_contig143.3072.1|Name=mRNA_F-serratus_M_contig143.3072.1|organism=Fucus serratus male|type=polypeptide|length=110bp
AALDLRDARASLTAAYNALFASFTASTLQTAGRIALGLHIGGLLKTHVLD
LFGPILDPVGYRLDLNTYFDEQNISYVGKANAMGGAPNMILNVVCYSVVF
VLFCVHSNIA
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