prot_F-serratus_M_contig143.3070.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig143.3070.1
Unique Nameprot_F-serratus_M_contig143.3070.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length137
Homology
BLAST of mRNA_F-serratus_M_contig143.3070.1 vs. uniprot
Match: A0A6H5JEW8_9PHAE (53EXOc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEW8_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 3.740e-55
Identity = 88/100 (88.00%), Postives = 97/100 (97.00%), Query Frame = 0
Query:   38 PPPLTHEQLPEESVYILDGTSMLFRAFYGRGASGYLAANGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRDTTFRRDMFPPYKAQRKPIPVDLTLQ 137
            PPPLTH+QLPEES+Y+LDGTSMLFRAFYGRGA GYLA+NGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGR+TTFRR ++P YKAQRKP+P+DLTLQ
Sbjct:    4 PPPLTHDQLPEESIYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQ 103          
BLAST of mRNA_F-serratus_M_contig143.3070.1 vs. uniprot
Match: A0A835ZC56_9STRA (5'-3' exonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC56_9STRA)

HSP 1 Score: 127 bits (318), Expect = 8.280e-34
Identity = 62/95 (65.26%), Postives = 78/95 (82.11%), Query Frame = 0
Query:   43 HEQLPEESVYILDGTSMLFRAFYGRGASGYLAANGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRDTTFRRDMFPPYKAQRKPIPVDLTLQ 137
            H  +P+E++++LDGTSMLFRA +G+G+  YLAA+GATEV AVLAMGIE AQFI EV+PRY+A+AFDV R++TFRR + P YKA R P P DL LQ
Sbjct:   57 HTDVPDETLWVLDGTSMLFRAHFGKGSQSYLAADGATEVAAVLAMGIELAQFIEEVQPRYLAVAFDVDRNSTFRRQLMPTYKAHRPPHPRDLLLQ 151          
BLAST of mRNA_F-serratus_M_contig143.3070.1 vs. uniprot
Match: A0A353MEJ4_9DELT (Ribonuclease H n=2 Tax=Geobacteraceae TaxID=213422 RepID=A0A353MEJ4_9DELT)

HSP 1 Score: 70.9 bits (172), Expect = 1.230e-11
Identity = 37/87 (42.53%), Postives = 53/87 (60.92%), Query Frame = 0
Query:   51 VYILDGTSMLFRAFYGRGASGYLAANGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRDTTFRRDMFPPYKAQRKPIPVDLTLQ 137
            +Y+LDG+S ++RA+YG   S   A +G     AVL       + + E +P Y A+ FD  R+ TFRRD++P YKA R+ +P DL LQ
Sbjct:    7 LYLLDGSSYIYRAYYGFRES---ATSGGMPTNAVLGFTRMLLELVQEHRPEYFAVVFDPPREETFRRDIYPAYKAHREAVPEDLLLQ 90          
BLAST of mRNA_F-serratus_M_contig143.3070.1 vs. uniprot
Match: A0A0M5ITQ7_9DELT (Ribonuclease H n=2 Tax=Desulfuromonas soudanensis TaxID=1603606 RepID=A0A0M5ITQ7_9DELT)

HSP 1 Score: 67.8 bits (164), Expect = 1.470e-10
Identity = 37/87 (42.53%), Postives = 49/87 (56.32%), Query Frame = 0
Query:   51 VYILDGTSMLFRAFYGRGASGYLAANGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRDTTFRRDMFPPYKAQRKPIPVDLTLQ 137
            +Y+LDG+  ++RAFYG      LA  G     AV          + E  P Y+A+ FD  R+ TFRRD++PPYKA R  +P DL LQ
Sbjct:   14 LYLLDGSGYIYRAFYG---IRDLATAGGMPTNAVFGFTKMLLSLLQENAPDYLAVVFDRPREETFRRDIYPPYKANRDAVPEDLALQ 97          
BLAST of mRNA_F-serratus_M_contig143.3070.1 vs. uniprot
Match: B9LZH3_GEODF (Ribonuclease H n=2 Tax=Geotalea TaxID=2910589 RepID=B9LZH3_GEODF)

HSP 1 Score: 66.6 bits (161), Expect = 3.720e-10
Identity = 36/87 (41.38%), Postives = 51/87 (58.62%), Query Frame = 0
Query:   51 VYILDGTSMLFRAFYGRGASGYLAANGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRDTTFRRDMFPPYKAQRKPIPVDLTLQ 137
            +Y+LDG+S ++RA+YG      LA +G     AV          + E +P YVA+ FD  R+ TFRR+++PPYKA R  +P DL  Q
Sbjct:    7 LYLLDGSSYIYRAYYG---IRDLATSGGMPTNAVFGFTRMLLTLLQENRPDYVAVVFDPPREDTFRREIYPPYKAHRDAMPEDLVPQ 90          
BLAST of mRNA_F-serratus_M_contig143.3070.1 vs. uniprot
Match: A0A661PE10_9DELT (Ribonuclease HI (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661PE10_9DELT)

HSP 1 Score: 63.2 bits (152), Expect = 6.390e-10
Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = 0
Query:   51 VYILDGTSMLFRAFYGRGASGYLAANGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRDTTFRRDMFPPYKAQRKPIPVDLTLQ 137
            +Y+LDG+S ++RA+YG      LA +G     AV          ++E +P Y+ + FD  R+ TFRR+++P YKA R+ +P DL LQ
Sbjct:    7 LYLLDGSSYIYRAYYG---IRDLATSGGMPTNAVFGFTKMLLGLLHENRPDYLTVVFDRPREETFRREIYPEYKANREAMPEDLGLQ 90          
BLAST of mRNA_F-serratus_M_contig143.3070.1 vs. uniprot
Match: A0A1G1FQR6_9BACT (Ribonuclease H n=1 Tax=Nitrospirae bacterium GWC2_56_14 TaxID=1801696 RepID=A0A1G1FQR6_9BACT)

HSP 1 Score: 65.1 bits (157), Expect = 1.280e-9
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 0
Query:   51 VYILDGTSMLFRAFYGRGASGYLAANGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRDTTFRRDMFPPYKAQRKPIPVDLTLQ 137
            +Y+LDG+S ++RA+YG      L+A+G     AV          + E +P Y A+ FD  RD TFRR+++P YKA R+ +P DL  Q
Sbjct:    7 LYLLDGSSYIYRAYYG---FRELSASGGMPTNAVFGFTRMLLTLLQENRPDYFAVVFDPPRDETFRRELYPAYKAHRETMPEDLVPQ 90          
BLAST of mRNA_F-serratus_M_contig143.3070.1 vs. uniprot
Match: A0A7X8QKJ6_9CLOT (DNA polymerase I n=1 Tax=Clostridiaceae bacterium TaxID=1898204 RepID=A0A7X8QKJ6_9CLOT)

HSP 1 Score: 65.1 bits (157), Expect = 1.400e-9
Identity = 33/89 (37.08%), Postives = 56/89 (62.92%), Query Frame = 0
Query:   49 ESVYILDGTSMLFRAFYGRGASGYLAANGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRDTTFRRDMFPPYKAQRKPIPVDLTLQ 137
            +S+ ++DG S++ RAFYG G + + +++  T  GAV       ++++NE++P ++ +AFD   + TFR + +  YK  RKP P DL LQ
Sbjct:   15 QSILLVDGHSIINRAFYGLGQATHFSSSDGTPTGAVFGFFNICSRYLNELEPSHMCVAFD-RHEPTFRHEKYDDYKGTRKPFPEDLKLQ 102          
BLAST of mRNA_F-serratus_M_contig143.3070.1 vs. uniprot
Match: A0A7X6U9V6_9CLOT (DNA polymerase I (Fragment) n=1 Tax=Clostridiaceae bacterium TaxID=1898204 RepID=A0A7X6U9V6_9CLOT)

HSP 1 Score: 64.7 bits (156), Expect = 1.680e-9
Identity = 37/89 (41.57%), Postives = 52/89 (58.43%), Query Frame = 0
Query:   49 ESVYILDGTSMLFRAFYGRGASGYLAANGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRDTTFRRDMFPPYKAQRKPIPVDLTLQ 137
            E + +LDG S++ RAFYG      L A   T  GA+ A    + + + +V+P +VA AFD  R+ TFR  MF  YK  RKP+P +L +Q
Sbjct:    2 EKLLLLDGNSLINRAFYGLYGRQNLTAPDGTPTGALFAFFNMYLKLLEDVQPTHVAAAFD-RREPTFRHQMFDAYKGTRKPMPDELAVQ 89          
BLAST of mRNA_F-serratus_M_contig143.3070.1 vs. uniprot
Match: A0A7V4UWE8_9DELT (Ribonuclease H n=1 Tax=Geobacteraceae bacterium TaxID=2282154 RepID=A0A7V4UWE8_9DELT)

HSP 1 Score: 64.3 bits (155), Expect = 2.390e-9
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 0
Query:   51 VYILDGTSMLFRAFYGRGASGYLAANGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRDTTFRRDMFPPYKAQRKPIPVDLTLQ 137
            +Y+LDG+S ++RA+YG      +A  G     AVL         I E +P Y+A+ FD  R+ TFRR+++P YKA R  +P +LT Q
Sbjct:    7 LYLLDGSSYIYRAYYG---IRDVATAGGMPTNAVLGFTRMLLSLIQENRPDYLAVVFDPPRENTFRREIYPAYKANRDAVPEELTPQ 90          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig143.3070.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEW8_9PHAE3.740e-5588.0053EXOc domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835ZC56_9STRA8.280e-3465.265'-3' exonuclease n=1 Tax=Tribonema minus TaxID=30... [more]
A0A353MEJ4_9DELT1.230e-1142.53Ribonuclease H n=2 Tax=Geobacteraceae TaxID=213422... [more]
A0A0M5ITQ7_9DELT1.470e-1042.53Ribonuclease H n=2 Tax=Desulfuromonas soudanensis ... [more]
B9LZH3_GEODF3.720e-1041.38Ribonuclease H n=2 Tax=Geotalea TaxID=2910589 RepI... [more]
A0A661PE10_9DELT6.390e-1039.08Ribonuclease HI (Fragment) n=1 Tax=Deltaproteobact... [more]
A0A1G1FQR6_9BACT1.280e-940.23Ribonuclease H n=1 Tax=Nitrospirae bacterium GWC2_... [more]
A0A7X8QKJ6_9CLOT1.400e-937.08DNA polymerase I n=1 Tax=Clostridiaceae bacterium ... [more]
A0A7X6U9V6_9CLOT1.680e-941.57DNA polymerase I (Fragment) n=1 Tax=Clostridiaceae... [more]
A0A7V4UWE8_9DELT2.390e-940.23Ribonuclease H n=1 Tax=Geobacteraceae bacterium Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.1010coord: 41..137
e-value: 6.4E-15
score: 57.0
IPR0200465'-3' exonuclease, alpha-helical arch, N-terminalPFAMPF027395_3_exonuc_Ncoord: 51..137
e-value: 1.5E-16
score: 60.7
IPR038969Flap endonucleasePANTHERPTHR42646FAMILY NOT NAMEDcoord: 49..135
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 50..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig143contigF-serratus_M_contig143:381751..431518 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig143.3070.1mRNA_F-serratus_M_contig143.3070.1Fucus serratus malemRNAF-serratus_M_contig143 381751..431524 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig143.3070.1 ID=prot_F-serratus_M_contig143.3070.1|Name=mRNA_F-serratus_M_contig143.3070.1|organism=Fucus serratus male|type=polypeptide|length=137bp
MSWRFSTAVFVGESLDEGRNASRIEHQTPRIASSRDLPPPLTHEQLPEES
VYILDGTSMLFRAFYGRGASGYLAANGATEVGAVLAMGIEFAQFINEVKP
RYVAMAFDVGRDTTFRRDMFPPYKAQRKPIPVDLTLQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0200465-3_exonucl_a-hlix_arch_N
IPR038969FEN_bact-like
IPR029060PIN-like_dom_sf