prot_F-serratus_M_contig142.3031.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig142.3031.1
Unique Nameprot_F-serratus_M_contig142.3031.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length204
Homology
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BLAST of mRNA_F-serratus_M_contig142.3031.1 vs. uniprot
Match: A0A6H5JY22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY22_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 3.200e-11
Identity = 33/90 (36.67%), Postives = 51/90 (56.67%), Query Frame = 0 
Query:   44 MWPPSDVVDEHKRRARFIWISFLGLIIGYSVWLVVSTIEKRKNPSVSLRLEEDRYAFPTISICAFAWSEVGKGC---DSEYLGCATSMYT 130
            MW P  VV EH+ RAR +W+S L  I  Y++WL+    + R NPS SL++  D +A+P + +C +     G+GC   D+    C ++  T
Sbjct:    1 MWKPDAVVPEHRWRARMVWVSLLVGITAYTIWLIWKIFDDRANPSTSLKITNDLFAYPYVLVCFYH----GQGCGFTDTSVDTCVSTALT 86
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BLAST of mRNA_F-serratus_M_contig142.3031.1 vs. uniprot
Match: D7FTW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW4_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 6.610e-5
Identity = 33/123 (26.83%), Postives = 56/123 (45.53%), Query Frame = 0 
Query:   61 IWISFLGLIIGYSVWLVVSTIEKRKNPSVSLRLEEDRYAFPTISICAFAWSEVGKGC--DSEYLGCATSMYTSAHSFIGFESNNNETYTTVSKPNEEHPYHCIDLDMSNIT-----EIENDSA 176
            +W+S L  I  Y++W +    +   NPS SL++  D YA+P + +C F     G+GC  + E +    +   S  + + F   N E Y  +    E +   C+  D+ ++        END A
Sbjct:    2 VWVSLLVCITAYTIWQIWKIFDDLANPSSSLKITNDLYAYPHVLVCFFH----GEGCGFEDESVDVCVTTALSESTTVSF---NGEYYDDLGAVTESN---CVGFDLGSLEFGDDITAENDQA 114
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig142.3031.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JY22_9PHAE3.200e-1136.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTW4_ECTSI6.610e-526.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001873Epithelial sodium channelPFAMPF00858ASCcoord: 52..150
e-value: 1.2E-5
score: 24.5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..78
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..59
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 79..204
NoneNo IPR availableTMHMMTMhelixcoord: 60..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig142contigF-serratus_M_contig142:607052..623076 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig142.3031.1mRNA_F-serratus_M_contig142.3031.1Fucus serratus malemRNAF-serratus_M_contig142 607052..623076 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig142.3031.1 ID=prot_F-serratus_M_contig142.3031.1|Name=mRNA_F-serratus_M_contig142.3031.1|organism=Fucus serratus male|type=polypeptide|length=204bp
TKKVRSERTGLWSILFCKSIKATVGGNIHTSSTVEAPAASSGAMWPPSDV
VDEHKRRARFIWISFLGLIIGYSVWLVVSTIEKRKNPSVSLRLEEDRYAF
PTISICAFAWSEVGKGCDSEYLGCATSMYTSAHSFIGFESNNNETYTTVS
KPNEEHPYHCIDLDMSNITEIENDSAFYPLRIIFGTYWYLSSENITVEEQ
VSES
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001873ENaC