prot_F-serratus_M_contig142.3023.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig142.3023.1
Unique Nameprot_F-serratus_M_contig142.3023.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length789
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig142.3023.1 vs. uniprot
Match: D8LPT3_ECTSI (EsV-1-7 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT3_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 1.570e-39
Identity = 163/246 (66.26%), Postives = 178/246 (72.36%), Query Frame = 0 
Query:  396 GRRRNRCLEPGCSKSPRYALPGQKAEYCSQHKMENYVDVKHPRCESDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXATRRGAK-----CNSPAKRSRDGPRSFAHDFAAVSLPG----PGPRAPSMPSFNLGTAGG----------ATAPKRGH-------TPAHAGGHRRATSESWIDFCPKRVYDTTAKHDGEEGDVADGIRRVIR 615
            G +RNRC  PGCSK PRYALPGQKAEYC+ HKM+NYVDVKHPRCES+L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EP XXXXXXXXXXXXXXXXXXXXXXXXXXX A+RR        C+SPAKR+R+GPRSFAHD AA         P   A +MP+F+LG              A  PKRGH       TPA AGGHRRATSESWIDFCPKRV++TT   D  +   +D    V R
Sbjct:   12 GSKRNRCQMPGCSKPPRYALPGQKAEYCTLHKMDNYVDVKHPRCESELGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASRRSTAGAAKPCSSPAKRARNGPRSFAHDSAAXXXXXXXXPPALPAGAMPAFSLGAXXXXXXXXXXXXRAPLPKRGHPXXXXXXTPARAGGHRRATSESWIDFCPKRVFETTTGKDAADLGASDNNDPVPR 257
[Close]
BLAST of mRNA_F-serratus_M_contig142.3023.1 vs. uniprot
Match: A0A6H5KQR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQR5_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 9.960e-22
Identity = 151/289 (52.25%), Postives = 173/289 (59.86%), Query Frame = 0 
Query:  402 CLEPGCSKSPRYALPGQKAEYCSQHKM----------------------------------------------ENYVDVKHPRCESDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXATRR-------GAK-CNSPAKRSRDGPRSFAHDFAAVSLPG----PGPRAPSMPSFNLGTAGG----------ATAPKRGH-------TPAHAGGHRRATSESWIDFCPKRVYDTTAKHDGEEGDVADGIRRVIR 615
            C+  GCS+   +A  G++  +CS+H++                                              +NYVDVKHPRCES+L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EP XXXXXXXXXXXXXXXXXXXXXXXXXXX A+RR       GAK C+SPAKR+R+GPRSFAHD A          PG  A +MP+F+LG AG           A  PKRGH       TPA AGGHRRATSESWIDFCPKRV++TT   D  +   +D    V R
Sbjct:  347 CMFGGCSRRATHAARGERPGHCSEHRLPGMADTTAVATPGGSKRNRXXXXXXXXXXXXXXXXXXXXXXXXXXXDNYVDVKHPRCESELGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASRRSTAGGGGGAKPCSSPAKRARNGPRSFAHDSAXXXXXXXXXPPGLPAGAMPAFSLGAAGXXXXXXXXXXRAPLPKRGHPXXXXXXTPARAGGHRRATSESWIDFCPKRVFETTTGKDAADLGTSDNNDPVPR 635
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig142.3023.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LPT3_ECTSI1.570e-3966.26EsV-1-7 (Partial) (Fragment) n=1 Tax=Ectocarpus si... [more]
A0A6H5KQR5_9PHAE9.960e-2252.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig142contigF-serratus_M_contig142:72557..93108 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig142.3023.1mRNA_F-serratus_M_contig142.3023.1Fucus serratus malemRNAF-serratus_M_contig142 71451..93661 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig142.3023.1 ID=prot_F-serratus_M_contig142.3023.1|Name=mRNA_F-serratus_M_contig142.3023.1|organism=Fucus serratus male|type=polypeptide|length=789bp
MAHEGMRNASYDRRRAHSPQGRQVWPNATTNPGNLGANAHPRETGAEPQA
VVAEAISRKVYVYGRGRDNSNSEACPSLARKEWLKPVSTLLRSIPNSKRS
PMEQDSRGGGHSYPAAHFSYPVHPQIMQQERRVESGFSRRDSFHGVGSDH
PGVRVGPRGDMAAVATPSIVERLKYERLTMAVEVDSPGRGLHHPRGGRGG
SFSPRFVGAQDEGAHLRNSRAGSEVMPSDHLRRLAQPEYNDRIRTPRADI
GPGAGRRPGADPRNVGDDRATLLAPSRVSLVDRFRANDNFNCVGQTSRCA
SHVTVAARETDIGREHSREPIVAAPTTPVRNAPTAMVVAMAKLPSVISLP
SERSAISPAKRSKEHPEVDKIAKRPPPAFQTNIVGEKSSQQGAVDGRRRN
RCLEPGCSKSPRYALPGQKAEYCSQHKMENYVDVKHPRCESDLGCVRQPT
FGWEGEKARFCSAHKMEGMLDVKNPRCAEPGCMKRPRYGDEGERARFCAA
HKFDNMVDLATRRGAKCNSPAKRSRDGPRSFAHDFAAVSLPGPGPRAPSM
PSFNLGTAGGATAPKRGHTPAHAGGHRRATSESWIDFCPKRVYDTTAKHD
GEEGDVADGIRRVIRTSVPTTASGAEEDPRRLVLKGTTNSAENNPRRHSY
QGTMNNTEVNHHRRLVQGSTPVAAESSAGNGSNYGSRSTSANLTTSILHL
GGELASVAPSPISPPSRSSPNRSASMSSGVSCRFASGAQHSRKTPPLPPP
LPPQRTQRFDPVDYEASAILLECRSGALLPRSQRSRSP*
back to top