prot_F-serratus_M_contig1416.3011.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1416.3011.1
Unique Name	prot_F-serratus_M_contig1416.3011.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	85

Homology

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BLAST of mRNA_F-serratus_M_contig1416.3011.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 8.150e-13
Identity = 39/85 (45.88%), Postives = 54/85 (63.53%), Query Frame = 0

Query:    1 QVASYVNATKDIGLRFVRGSGLRQSVYADADYAATSNDRRSVSGVAVVLGDASTSWKSITQKCVATATCGTEYVGSCDAANEAIF 85
            Q+ SY+NAT D+G+ +VRGSGL   VY DA YA     RRSV+G+AV +G    S  S TQ+ V+ +T   EY+ + +   EA+F
Sbjct: 1068 QILSYLNATMDLGITYVRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALF 1152

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BLAST of mRNA_F-serratus_M_contig1416.3011.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 8.220e-13
Identity = 39/85 (45.88%), Postives = 54/85 (63.53%), Query Frame = 0

Query:    1 QVASYVNATKDIGLRFVRGSGLRQSVYADADYAATSNDRRSVSGVAVVLGDASTSWKSITQKCVATATCGTEYVGSCDAANEAIF 85
            Q+ SY+NAT D+G+ +VRGSGL   VY DA YA     RRSV+G+AV +G    S  S TQ+ V+ +T   EY+ + +   EA+F
Sbjct: 1621 QILSYLNATMDLGITYVRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALF 1705

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BLAST of mRNA_F-serratus_M_contig1416.3011.1 vs. uniprot
Match: A0A6H5K9K6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K6_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 3.220e-12
Identity = 38/84 (45.24%), Postives = 53/84 (63.10%), Query Frame = 0

Query:    2 VASYVNATKDIGLRFVRGSGLRQSVYADADYAATSNDRRSVSGVAVVLGDASTSWKSITQKCVATATCGTEYVGSCDAANEAIF 85
            + SY+NAT D+G+ +VRGSGL   VY DA YA     RRSV+G+AV +G    S  S TQ+ V+ +T   EY+ + +   EA+F
Sbjct:  194 ILSYLNATMDLGITYVRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALF 277

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BLAST of mRNA_F-serratus_M_contig1416.3011.1 vs. uniprot
Match: A0A6H5L9N7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9N7_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 7.940e-11
Identity = 35/85 (41.18%), Postives = 54/85 (63.53%), Query Frame = 0

Query:    1 QVASYVNATKDIGLRFVRGSGLRQSVYADADYAATSNDRRSVSGVAVVLGDASTSWKSITQKCVATATCGTEYVGSCDAANEAIF 85
            ++ SY+N TKD+G+ +VRGSGL   V+ D+ YA ++ DRRS +G+AV +G       + TQ   A +T   EY+ + +  NEA+F
Sbjct:   76 RIMSYLNETKDLGITYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVNEALF 160

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BLAST of mRNA_F-serratus_M_contig1416.3011.1 vs. uniprot
Match: A0A6H5KCR8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCR8_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 1.210e-10
Identity = 34/85 (40.00%), Postives = 53/85 (62.35%), Query Frame = 0

Query:    1 QVASYVNATKDIGLRFVRGSGLRQSVYADADYAATSNDRRSVSGVAVVLGDASTSWKSITQKCVATATCGTEYVGSCDAANEAIF 85
            ++ SY+N TKD+G+ +VRGSGL   V+ D+ YA ++ DRRS +G+AV +G       + TQ   A +T   EY+ + +   EA+F
Sbjct:    7 RIMSYLNETKDLGITYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVKEALF 91

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BLAST of mRNA_F-serratus_M_contig1416.3011.1 vs. uniprot
Match: A0A6H5KR64_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR64_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 1.810e-10
Identity = 34/85 (40.00%), Postives = 53/85 (62.35%), Query Frame = 0

Query:    1 QVASYVNATKDIGLRFVRGSGLRQSVYADADYAATSNDRRSVSGVAVVLGDASTSWKSITQKCVATATCGTEYVGSCDAANEAIF 85
            ++ SY+N TKD+G+ +VRGSGL   V+ D+ YA ++ DRRS +G+AV +G       + TQ   A +T   EY+ + +   EA+F
Sbjct:   34 RIMSYLNETKDLGIAYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVKEALF 118

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BLAST of mRNA_F-serratus_M_contig1416.3011.1 vs. uniprot
Match: A0A6H5JU54_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU54_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 2.040e-10
Identity = 35/85 (41.18%), Postives = 53/85 (62.35%), Query Frame = 0

Query:    1 QVASYVNATKDIGLRFVRGSGLRQSVYADADYAATSNDRRSVSGVAVVLGDASTSWKSITQKCVATATCGTEYVGSCDAANEAIF 85
            ++ SY+N TKD+G+ +VRGSGL   V+ D+ YA ++ DRRS +G+AV +G       + TQ   A +T   EY+   +A  EA+F
Sbjct:  193 RIMSYLNETKDLGITYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTTEAEYIAGGEAVKEALF 277

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BLAST of mRNA_F-serratus_M_contig1416.3011.1 vs. uniprot
Match: A0A6H5K887_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K887_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 2.560e-10
Identity = 34/85 (40.00%), Postives = 53/85 (62.35%), Query Frame = 0

Query:    1 QVASYVNATKDIGLRFVRGSGLRQSVYADADYAATSNDRRSVSGVAVVLGDASTSWKSITQKCVATATCGTEYVGSCDAANEAIF 85
            ++ SY+N TKD+G+ +VRGSGL   V+ D+ YA ++ DRRS +G+AV +G       + TQ   A +T   EY+ + +   EA+F
Sbjct:   34 RIMSYLNETKDLGITYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVKEALF 118

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BLAST of mRNA_F-serratus_M_contig1416.3011.1 vs. uniprot
Match: A0A6H5K588_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K588_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 2.580e-10
Identity = 34/85 (40.00%), Postives = 52/85 (61.18%), Query Frame = 0

Query:    1 QVASYVNATKDIGLRFVRGSGLRQSVYADADYAATSNDRRSVSGVAVVLGDASTSWKSITQKCVATATCGTEYVGSCDAANEAIF 85
            ++ SY+N TKD+G+ +VRGSGL   V+ D+ YA ++ DRRS +G+AV +G       + TQ   A  T   EY+ + +   EA+F
Sbjct:   76 RIMSYLNETKDLGITYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQPTTEAEYIAAGEGVKEALF 160

[Close]

BLAST of mRNA_F-serratus_M_contig1416.3011.1 vs. uniprot
Match: A0A6H5JRV3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV3_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 2.880e-10
Identity = 34/85 (40.00%), Postives = 53/85 (62.35%), Query Frame = 0

Query:    1 QVASYVNATKDIGLRFVRGSGLRQSVYADADYAATSNDRRSVSGVAVVLGDASTSWKSITQKCVATATCGTEYVGSCDAANEAIF 85
            ++ SY+N TKD+G+ +VRGSGL   V+ D+ YA ++ DRRS +G+AV +G       + TQ   A +T   EY+ + +   EA+F
Sbjct:  102 RILSYLNETKDLGITYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVKEALF 186

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1416.3011.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1416.3011.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JKS3_9PHAE	8.150e-13	45.88	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L175_9PHAE	8.220e-13	45.88	Uncharacterized protein n=9 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K9K6_9PHAE	3.220e-12	45.24	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5L9N7_9PHAE	7.940e-11	41.18	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5KCR8_9PHAE	1.210e-10	40.00	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KR64_9PHAE	1.810e-10	40.00	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JU54_9PHAE	2.040e-10	41.18	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5K887_9PHAE	2.560e-10	40.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K588_9PHAE	2.580e-10	40.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JRV3_9PHAE	2.880e-10	40.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039537	Retrotransposon Ty1/copia-like	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 4..84
None	No IPR available	PANTHER	PTHR11439:SF275		coord: 4..84

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1416	contig	F-serratus_M_contig1416:91624..91878 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1416.3011.1	mRNA_F-serratus_M_contig1416.3011.1	Fucus serratus male	mRNA	F-serratus_M_contig1416 91624..91878 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1416.3011.1 ID=prot_F-serratus_M_contig1416.3011.1|Name=mRNA_F-serratus_M_contig1416.3011.1|organism=Fucus serratus male|type=polypeptide|length=85bp
QVASYVNATKDIGLRFVRGSGLRQSVYADADYAATSNDRRSVSGVAVVLG
DASTSWKSITQKCVATATCGTEYVGSCDAANEAIF

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR039537	Retrotran_Ty1/copia-like