prot_F-serratus_M_contig1415.3008.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1415.3008.1
Unique Nameprot_F-serratus_M_contig1415.3008.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length483
Homology
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BLAST of mRNA_F-serratus_M_contig1415.3008.1 vs. uniprot
Match: A0A6H5KK34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK34_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 1.520e-10
Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = 0 
Query:    1 CNSCTSIADDHKMVLCKGVGCEGK-YHYECLPVPLEGVPAG--PWFCPACIEAQKSNN 55
            CN+C S  DD K++LC G GC    YHY+CLPVPL+G+P G  PWFCP C   +K ++
Sbjct:  961 CNACGSTDDDEKILLCDGPGCNSTPYHYDCLPVPLKGLPLGTDPWFCPRCAHGKKPSS 1018
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BLAST of mRNA_F-serratus_M_contig1415.3008.1 vs. uniprot
Match: A0A7S4W153_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4W153_9DINO)

HSP 1 Score: 55.5 bits (132), Expect = 7.100e-5
Identity = 25/58 (43.10%), Postives = 33/58 (56.90%), Query Frame = 0 
Query:    1 CNSCTSIADDHKMVLCKGVG--CEGKYHYECLPVPLEGVPAGPWFCPACIEAQKSNNA 56
            C  C    D+HK++LC G+G  C   YHY C  V L  VP G WFCP C  ++ + +A
Sbjct:   50 CQVCNKSNDEHKLLLCDGLGGRCNAAYHYYC--VGLSYVPEGDWFCPPCSASRGAISA 105
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1415.3008.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KK34_9PHAE1.520e-1053.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4W153_9DINO7.100e-543.10Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 1..48
e-value: 2.3E-5
score: 33.8
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 1..49
e-value: 1.4E-7
score: 31.3
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 1..50
score: 9.285
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..62
e-value: 3.7E-13
score: 50.9
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 1..47
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 1..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1415contigF-serratus_M_contig1415:218570..222305 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1415.3008.1mRNA_F-serratus_M_contig1415.3008.1Fucus serratus malemRNAF-serratus_M_contig1415 218570..222307 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1415.3008.1 ID=prot_F-serratus_M_contig1415.3008.1|Name=mRNA_F-serratus_M_contig1415.3008.1|organism=Fucus serratus male|type=polypeptide|length=483bp
CNSCTSIADDHKMVLCKGVGCEGKYHYECLPVPLEGVPAGPWFCPACIEA
QKSNNAGAGFHGRGGGITVGDGLGGARGGRRAGRATGVSAEGVVGEAGGG
AEVAAFEGEEGLRGAGEGAASVGRGGTEVTTVTTESTEAGAGEASGEGVL
AAGDERTESEEVLSVGDGTTSSEGAETGTAPTGSAETPPTTLGEEGGSSG
CANPRDGVTLLKTSARSRRGVPSNYRFVPEDERAELAKKYGRPDPGDGDV
GGGGNASCSESSYVSGGDSSSQGKGGSSDRSRLRGNGMALRSSPGSWQDI
PYRFVDGNKQYEELPVRFKSQRGGPGRIPEESSAPRHDRCSYRGCQASGR
RAVEANVPPSGIASAASTNPVKVALASASERTEKCRELIVEGWPEEQRWA
CGSEACILHRHSFHGRCLVVHIGNSAVAPAAEAITDMDVDPGADTDANAG
VNTTSSVDAPADASANTSVDASANTSAGAPADA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR019787Znf_PHD-finger
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD