prot_F-serratus_M_contig1411.2973.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1411.2973.1
Unique Nameprot_F-serratus_M_contig1411.2973.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length575
Homology
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BLAST of mRNA_F-serratus_M_contig1411.2973.1 vs. uniprot
Match: D8LE58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE58_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 5.670e-33
Identity = 209/324 (64.51%), Postives = 235/324 (72.53%), Query Frame = 0 
Query:  251 LPKQASGLTTGSSSSIDGVVLNLISPTEHPKRSPSGSVELERRRVRFSCSRFAMDKAAQGGHMSVLQLLHDQGHSCTTNAMNWAAAFGQLEAVKWLSENRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHDIRAPCTSTAIHLAYLHGHMGVYNFLGDMYPDKKSAIDWNTADSIIVAEREIIEDAKKRNMELEKEARXXXXXXXXXXXXXXXXXXXXXXXXQSLPIKFGRDGKPSLSSIKTVGI 574
            L  + S  +  S +S+D + L L SPT         S+        FSCS+FAMDKAAQGGH+ VLQLLHDQGH CTTNAM+WAAAFG+ E VKWLSENR   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  DI A CTSTA+HLA +HGH GVY FL  MYP K S  D   +D  +VAE+E+++  K  ++ +++EAR                         SLPI FG +GKP+LS I T G+
Sbjct:   86 LKTRGSNTSVTSINSLDSLGLGLDSPTL--------SIAHGNGHFGFSCSKFAMDKAAQGGHIDVLQLLHDQGHECTTNAMDWAAAFGKTETVKWLSENREEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIGATCTSTAVHLAQVHGHHGVYRFLNTMYPGKASPFD-AFSDPTVVAEQEMVDQDKCLDLVVQREARRRRQSVIFADTVEASESRRRA----SLPIPFGHNGKPALSRINTFGL 396
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BLAST of mRNA_F-serratus_M_contig1411.2973.1 vs. uniprot
Match: A0A6H5K2E8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2E8_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 5.770e-31
Identity = 262/665 (39.40%), Postives = 313/665 (47.07%), Query Frame = 0 
Query:    1 MVGLRFLSRLRASSKRKSAPVSKTSQAELCFSVDKIWNLILSFQDGSPSGSWLMEDGNLAADLEHLELMK-------------ARHREFRYSVDAMDGAAMAGHVEILEFLWRLGQDCTTKXXXXXXXXXXXXXXAWLHAKTTAGATKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---RGRGWXXXXXXXXXXXXXXXXXXXXXXXXXXEGGTDQALQFAVGRGHTEMVGLLSIPRRGSNAARLPKQASGLTTGSSS--SIDGVVLNLISPTEHPKRSPSGSVELERRRVRFSCSRFAMDKAAQGGHMSVLQLLHDQGHSCTTNAMNWAAAFGQLEAVKWLSENRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------------------------------------LHDIRAPCTSTAIHLAYLHGHMGVYNFLGDMYPDKKSAIDWNTADSIIVAEREIIEDAKKRNMELEKEARXXXXXXXXXXXXXXXXXXXXXXXXQSLPIKFGRDGKPSLSSIKTVGI 574
            M GL+ + RLRA  KR+          +  F++ K+  LI S+QDG     W  ED NLAA+L HL+LMK             +R+ +     +  D AA  G++ +++                           WLH     G T S    XXXXXXXXXXXXXXXXXX                              R  G                           EGGT+ ALQ+A       MV LL  PR+ S++  +  Q  G  T  +S  S+D + L L SPT         S+   +   RF+CS+FAMDKAAQGGH+ VLQLLHDQGH CTTNAM+WAAAFG+ E VKWLSENR   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                                 LHD  A CTSTA+HLA +HGH GVY FL  MYP K S  D   +D  +VAE+E+++  K  ++ +++EAR                         SLPI FG +GKP+LS I T  +
Sbjct:    1 MGGLKLIYRLRARLKRRPQLQLDVKATDHGFAIKKVRKLIFSYQDGGAPALWFPEDANLAAELGHLQLMKTMKGVKSGQIFLTSRNLKVSRQRNRPDYAAANGYLPVVQ---------------------------WLHDNRREGCTVSAMNWXXXXXXXXXXXXXXXXXXETYVWYDMTQVDTPYAERTLPDRLFDLLSYRHEG-CTTAAFDRAAMNNHVHVIMWLTDNRSEGGTESALQWA-------MVALLLAPRKDSDSEGVALQTRGSNTSVTSIKSLDSLGLGLDSPTL--------SIPHGKGHFRFNCSKFAMDKAAQGGHIDVLQLLHDQGHECTTNAMDWAAAFGKTETVKWLSENREEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCDHIDDTPENSSSHPTAACEGCRPTYFIASFSSGGILDPKDNSFGSLPSVPQTDRLAVDSCYRQHPGPHRSPALEGCSREAMERAARNGHLEVVKLLHDRGATCTSTAVHLAQVHGHHGVYRFLNAMYPGKASPFD-AFSDPTVVAEQEMVDQDKSLDLVVQREARRRRQSVIFADTVEASESRRRA----SLPIPFGHNGKPALSRINTFAL 617
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1411.2973.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LE58_ECTSI5.670e-3364.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K2E8_9PHAE5.770e-3139.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 505..532
NoneNo IPR availablePFAMPF13637Ank_4coord: 193..239
e-value: 6.3E-5
score: 23.5
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 386..487
coord: 298..485
coord: 60..244
coord: 191..392
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 354..384
e-value: 1100.0
score: 4.8
coord: 78..107
e-value: 1300.0
score: 4.2
coord: 161..193
e-value: 1100.0
score: 4.6
coord: 438..467
e-value: 89.0
score: 11.9
coord: 299..328
e-value: 4500.0
score: 0.1
coord: 410..437
e-value: 3400.0
score: 1.1
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 294..493
e-value: 6.4E-27
score: 96.5
coord: 58..242
e-value: 5.6E-21
score: 77.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 84..239
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 301..488
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 361..432
e-value: 1.3E-8
score: 35.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1411contigF-serratus_M_contig1411:27115..43795 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1411.2973.1mRNA_F-serratus_M_contig1411.2973.1Fucus serratus malemRNAF-serratus_M_contig1411 27028..44542 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1411.2973.1 ID=prot_F-serratus_M_contig1411.2973.1|Name=mRNA_F-serratus_M_contig1411.2973.1|organism=Fucus serratus male|type=polypeptide|length=575bp
MVGLRFLSRLRASSKRKSAPVSKTSQAELCFSVDKIWNLILSFQDGSPSG
SWLMEDGNLAADLEHLELMKARHREFRYSVDAMDGAAMAGHVEILEFLWR
LGQDCTTKAMDGAAKEGHLEVIAWLHAKTTAGATKSAMDQSAASGHLSTV
KWLHRNRREGCTVSAMNWAAEKGHLDVVKWLHHNRRGRGWCTTAAFDRAA
MNNHMDVITWLISNRREGGTDQALQFAVGRGHTEMVGLLSIPRRGSNAAR
LPKQASGLTTGSSSSIDGVVLNLISPTEHPKRSPSGSVELERRRVRFSCS
RFAMDKAAQGGHMSVLQLLHDQGHSCTTNAMNWAAAFGQLEAVKWLSENR
SEGCTKDAMDHAAANGHLKTVKWLHGNRREGCTIYALTDAAAYGHLEMVK
WLHRNRREGCGREAMDDAAENGQLEIVRWLYRNRVEGCSREALEGAARNG
HLEVVRLLHDIRAPCTSTAIHLAYLHGHMGVYNFLGDMYPDKKSAIDWNT
ADSIIVAEREIIEDAKKRNMELEKEARRRRQSILLLSSSSAGSKQKERRR
RQSLPIKFGRDGKPSLSSIKTVGI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom