prot_F-serratus_M_contig14.2887.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig14.2887.1
Unique Nameprot_F-serratus_M_contig14.2887.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length167
Homology
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BLAST of mRNA_F-serratus_M_contig14.2887.1 vs. uniprot
Match: A0A7J7F8W6_DICBM (Uncharacterized protein n=1 Tax=Diceros bicornis minor TaxID=77932 RepID=A0A7J7F8W6_DICBM)

HSP 1 Score: 52.8 bits (125), Expect = 6.270e-5
Identity = 29/72 (40.28%), Postives = 40/72 (55.56%), Query Frame = 0 
Query:    6 VEPFLERVGGTLDKLEADQKRVEEAYRAVAVRFGENPSTTPNEAFFELIDRMVQMIDKAAAQNRKRAEEAAA 77
            ++ FL     T+DKL AD K  +EAY++V   FGENP TT    FF L    ++   KA  +  +  +EAAA
Sbjct: 1004 LKEFLRANSPTMDKLLADSKTAQEAYKSVVEYFGENPKTTSPSMFFSLFSHFIKAYKKAEQEVEQWKKEAAA 1075
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig14.2887.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7J7F8W6_DICBM6.270e-540.28Uncharacterized protein n=1 Tax=Diceros bicornis m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 10..37
NoneNo IPR availableCOILSCoilCoilcoord: 69..89
NoneNo IPR availableSUPERFAMILY101447Formin homology 2 domain (FH2 domain)coord: 2..90
IPR042201Formin, FH2 domain superfamilyGENE3D1.20.58.2220coord: 1..141
e-value: 6.4E-16
score: 60.4
IPR015425Formin, FH2 domainPROSITEPS51444FH2coord: 1..87
score: 12.896

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig14contigF-serratus_M_contig14:540767..544382 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig14.2887.1mRNA_F-serratus_M_contig14.2887.1Fucus serratus malemRNAF-serratus_M_contig14 540741..544382 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig14.2887.1 ID=prot_F-serratus_M_contig14.2887.1|Name=mRNA_F-serratus_M_contig14.2887.1|organism=Fucus serratus male|type=polypeptide|length=167bp
MFVDTVEPFLERVGGTLDKLEADQKRVEEAYRAVAVRFGENPSTTPNEAF
FELIDRMVQMIDKAAAQNRKRAEEAAALARRQARTQNRRKPKPSSNDHKT
LSNDHKTLPNDHKTLPNDHKTLPNDHETLPNDPESSSNDHQTLPNDHETL
LDEVSLQELLVQRARER
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042201FH2_Formin_sf
IPR015425FH2_Formin