prot_F-serratus_M_contig1398.2855.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1398.2855.1
Unique Nameprot_F-serratus_M_contig1398.2855.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length549
Homology
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BLAST of mRNA_F-serratus_M_contig1398.2855.1 vs. uniprot
Match: A0A6H5JDC5_9PHAE (CS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDC5_9PHAE)

HSP 1 Score: 362 bits (928), Expect = 5.540e-113
Identity = 279/717 (38.91%), Postives = 348/717 (48.54%), Query Frame = 0 
Query:    1 MLANHTAGKNFISDACILYAEALQTLAKVDACI----------------------ARLPRDDD-------VATVSQPKISKEYQENNAE---------ERAGLSNRADTLRPSLYLNLAACNLLLHEWAAAVACCTQVLERC-GDGI--IEA-VASAAESSRDG------------------------CGS--------------------------NGQQRAGGKGH--------------------------HDESNISNGNNTSMWCREMAAKALYRRSSARDGEGDLGLAREDLSTALKLKPGDANIRRELKKVEKHLAEKEAKAKLKRETEEGRRRNRLRQEERHASPLSQTKITTTAFPVGDGSKPSMRSSALAPV-----------SAGKEGPEEPCEHEQDLASRAC---QAVPQADSNDEQGSLQDPATPPGEGEGEAQVEPFPTKNGGECRNGLYAWNQSVRE----------VQVSVKVPDWVRASDVRVDIGRSRLTVAARRAGAGES-----------DTTRKRTQAEPLSST----------------GREWEEVVILAGPLSRPVQVDESVWTLETPGSVLLYLQKELPTDGEPGFEWWATVMEGDEEIDVVKCDAGSDASQYPEHARQRGAKALWDYQQMTPEERREEELNEQRMREAKRQMAEEVEERERNLANALKDPNKAEMYRKLREVMPDTPISMK 548
            +LA HTAGKNF+ DAC+LYAE L+ L + DA +                      A    + D        + V  P+   +  +  A          E   LS RADT+RPSLYLNLAACNLLL EW  A+ACCT VL+ C GD +  IEA +    + +RDG                         GS                            QQ+ G  G                            +ES   +       CRE+AAK LYRR++A  G GD+  AREDL  AL+LKP DA I RELKK +K LAE EA+  L+R+TEE                              DG     +  A +P              G +G  E  E++Q    R     +       ++E   L            E   +PF T NGGECRNGLYAWNQS+ E          VQVSVK+P W RASDVRVD+ RSRL+V+     A +             T    T A P +S+                G       +LAG LSRPVQVDE +WT+E PG VLLYLQKELP DGEPGFEWWA VMEGD EIDV+ CDAGSDAS+YPEHAR+RGAKALW++Q  +P+ER    L E+RMR+A RQM EE E+R+R+L  A+KDP KAE+YR+L+++MPDT IS+K
Sbjct:   48 VLAKHTAGKNFLRDACVLYAEGLRVLGEADARLLAQRAQQXXXXXXXXXXXXXXXASAADNSDGSRSLTPSSPVPPPREKSQGNDGQASVLPPTLQDRETISLSKRADTVRPSLYLNLAACNLLLQEWTPAIACCTHVLDECCGDALREIEAEIGGTGKEARDGVPGVAQGDRRTASAAANDSTDTTRAGSATGTSTGDATDAALAPTGTGAPPDKRQQQQKEGQSGEIYGEHQGTTAPSRGADREAEPRADPPQEESGGRDREAEKTRCREVAAKCLYRRAAALAGGGDVAAAREDLVRALRLKPRDAAISRELKKADKQLAENEARESLRRKTEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGGAPTQQLARSPAPGADHAVIGGGKGGHQGGVEAPENQQQRGPRVSKEEEGKGSCSGDEESNELSQ----------EQPEQPFSTHNGGECRNGLYAWNQSIDEARAHHSNSCRVQVSVKIPPWARASDVRVDLHRSRLSVSVVIPHADKDRPRGTRPQFSHGTETSATTAGPTASSNAAKDPAPQGVDPGVVGEGETATPVLAGALSRPVQVDECLWTIERPGRVLLYLQKELPADGEPGFEWWACVMEGDPEIDVLACDAGSDASRYPEHARRRGAKALWEHQNKSPKER----LEEERMRDAYRQMEEEAEQRQRDLEKAMKDPRKAELYRQLKKIMPDTSISIK 750
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BLAST of mRNA_F-serratus_M_contig1398.2855.1 vs. uniprot
Match: A0A7S3VZL0_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3VZL0_EMIHU)

HSP 1 Score: 69.7 bits (169), Expect = 5.270e-10
Identity = 58/163 (35.58%), Postives = 79/163 (48.47%), Query Frame = 0 
Query:  323 KNGGECRNGLYAWNQSVREVQVSVKVPDWVRASDVRVDIGRSRLTVAARRAGAGESDTTRKRTQAEPLSSTGREWEEVVILAGPLSRPVQVDESVWTLETPGSVLLYLQKELPTDGEPGFE--WWATVMEGDEEIDVVKCDAGSDASQ--YPEHARQRGAKAL 481
            KNGG   +  Y W QS REV +++      R  D RV+I RSR++VAAR                    S G EW+   +L G L RPV  DE  W++E  GS+++ L K    DG  G E  WW  V+ G++ ++    DA + A+    PE  R    KAL
Sbjct:   12 KNGGSGAH--YRWGQSAREVTIAINAGSR-RGRDFRVEINRSRVSVAAR--------------------SCGDEWQH--LLRGELQRPVLTDECEWSVED-GSLIIALAK----DGRLGAEAEWWTGVLAGEDTLEARTADAVAYAALEGLPEEERHLATKAL 144
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BLAST of mRNA_F-serratus_M_contig1398.2855.1 vs. uniprot
Match: A0A7S3RJ00_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RJ00_EMIHU)

HSP 1 Score: 68.9 bits (167), Expect = 7.550e-10
Identity = 62/177 (35.03%), Postives = 85/177 (48.02%), Query Frame = 0 
Query:  323 KNGGECRNGLYAWNQSVREVQVSVKVPDWVRASDVRVDIGRSRLTVAARRAGAGESDTTRKRTQAEPLSSTGREWEEVVILAGPLSRPVQVDESVWTLETPGSVLLYLQKELPTDGEPGFE--WWATVMEGDEEIDVVKCDAGSDASQ--YPEHARQRGAKALWDYQ--QMTPEERR 493
            KNGG   +  Y W QS REV +++      R  D RV+I RSR++VAAR                    S G EW+   +L G L RPV  DE  W++E  GS+++ L K    DG  G E  WW  V+ G++ ++    DA + A+    PE  R    KA  + Q    TP +RR
Sbjct:   12 KNGGSGAH--YRWGQSAREVTIAINAGSR-RGRDFRVEINRSRVSVAAR--------------------SCGDEWQH--LLRGELQRPVLTDECEWSVED-GSLIIALAK----DGRLGAEAEWWTGVLAGEDTLEARTADAVAYAALEGLPEEERHLATKAAAERQPRDSTPPQRR 158
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BLAST of mRNA_F-serratus_M_contig1398.2855.1 vs. uniprot
Match: R1DA98_EMIHU (CS domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DA98_EMIHU)

HSP 1 Score: 67.4 bits (163), Expect = 9.500e-10
Identity = 51/142 (35.92%), Postives = 70/142 (49.30%), Query Frame = 0 
Query:  323 KNGGECRNGLYAWNQSVREVQVSVKVPDWVRASDVRVDIGRSRLTVAARRAGAGESDTTRKRTQAEPLSSTGREWEEVVILAGPLSRPVQVDESVWTLETPGSVLLYLQKELPTDGEPGFE--WWATVMEGDEEIDVVKCDA 462
            KNGG   +  Y W QS REV +++      R  D RV+I RSR++VAAR                    S G EW+   +L G L RPV  DE  W++E  GS+++ L K    DG  G E  WW  V+ G++ ++    DA
Sbjct:    7 KNGGSGAH--YRWGQSAREVTIAINAGSR-RGRDFRVEINRSRVSVAAR--------------------SCGDEWQH--LLRGELQRPVLTDECEWSVED-GSLIIALAK----DGRLGAEAEWWTGVLAGEDTLEARTADA 118
[Close]
BLAST of mRNA_F-serratus_M_contig1398.2855.1 vs. uniprot
Match: R1D443_EMIHU (CS domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D443_EMIHU)

HSP 1 Score: 67.4 bits (163), Expect = 1.860e-9
Identity = 51/142 (35.92%), Postives = 70/142 (49.30%), Query Frame = 0 
Query:  323 KNGGECRNGLYAWNQSVREVQVSVKVPDWVRASDVRVDIGRSRLTVAARRAGAGESDTTRKRTQAEPLSSTGREWEEVVILAGPLSRPVQVDESVWTLETPGSVLLYLQKELPTDGEPGFE--WWATVMEGDEEIDVVKCDA 462
            KNGG   +  Y W QS REV +++      R  D RV+I RSR++VAAR                    S G EW+   +L G L RPV  DE  W++E  GS+++ L K    DG  G E  WW  V+ G++ ++    DA
Sbjct:   18 KNGGSGAH--YRWGQSAREVTIAINAGSR-RGRDFRVEINRSRVSVAAR--------------------SCGDEWQH--LLRGELQRPVLTDECEWSVED-GSLIIALAK----DGRLGAEAEWWTGVLAGEDTLEARTADA 129
[Close]
BLAST of mRNA_F-serratus_M_contig1398.2855.1 vs. uniprot
Match: R1FSV2_EMIHU (CS domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FSV2_EMIHU)

HSP 1 Score: 67.8 bits (164), Expect = 1.960e-9
Identity = 52/146 (35.62%), Postives = 72/146 (49.32%), Query Frame = 0 
Query:  323 KNGGECRNGLYAWNQSVREVQVSVKVPDWVRASDVRVDIGRSRLTVAARRAGAGESDTTRKRTQAEPLSSTGREWEEVVILAGPLSRPVQVDESVWTLETPGSVLLYLQKELPTDGEPGFE--WWATVMEGDEEIDVVKCDAGSDA 466
            KNGG   +  Y W QS REV +++      R  D RV+I RSR++VAAR                    S G EW+   +L G L RPV  DE  W++E  GS+++ L K    DG  G E  WW  V+ G++ ++    DA  +A
Sbjct:   18 KNGGSGAH--YRWGQSAREVTIAINAGSR-RGRDFRVEINRSRVSVAAR--------------------SCGDEWQH--LLRGELQRPVLTDECEWSVED-GSLIIALAK----DGRLGAEAEWWTGVLAGEDTLEARTADAVREA 133
[Close]
BLAST of mRNA_F-serratus_M_contig1398.2855.1 vs. uniprot
Match: R4XDE4_TAPDE (Nuclear movement protein n=1 Tax=Taphrina deformans (strain PYCC 5710 / ATCC 11124 / CBS 356.35 / IMI 108563 / JCM 9778 / NBRC 8474) TaxID=1097556 RepID=R4XDE4_TAPDE)

HSP 1 Score: 65.1 bits (157), Expect = 1.290e-8
Identity = 38/133 (28.57%), Postives = 65/133 (48.87%), Query Frame = 0 
Query:  327 ECRNGLYAWNQSVREVQVSVKVPDWVRASDVRVDIGRSRLTVAARRAGAGESDTTRKRTQAEPLSSTGREWEEVVILAGPLSRPVQVDESVWTLETPGSVLLYLQKELPTDGEPGFEWWATVMEGDEEIDVVK 459
            E     Y+W+Q+++EV+V++ VP+  R  D+ + IG+++L+V  +                      G+E    V  AG L++ V VDES WT++    + ++L+K          EWW  ++EG   ID  K
Sbjct:   16 ELEQCTYSWSQTLKEVEVTIPVPEGTRGKDLSITIGKNKLSVGLK----------------------GKE----VYFAGTLTKEVHVDESTWTIDDQRELNIHLEKVSQ-------EWWKAIIEGHPAIDTTK 115
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BLAST of mRNA_F-serratus_M_contig1398.2855.1 vs. uniprot
Match: A0A1Y2FNN0_PROLT (Nuclear movement protein nudC n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2FNN0_PROLT)

HSP 1 Score: 57.8 bits (138), Expect = 4.050e-6
Identity = 35/127 (27.56%), Postives = 63/127 (49.61%), Query Frame = 0 
Query:  333 YAWNQSVREVQVSVKVPDWVRASDVRVDIGRSRLTVAARRAGAGESDTTRKRTQAEPLSSTGREWEEVVILAGPLSRPVQVDESVWTLETPGSVLLYLQKELPTDGEPGFEWWATVMEGDEEIDVVK 459
            Y+W+Q+++EV ++V VP   R  D+ + I  S+L+V  +    G+                       V+ +G L++ V+VD+S WT+++   V ++L+K        G  WW  V++G  +ID  K
Sbjct:   19 YSWSQTLKEVSITVPVPQGTRGKDLDIQILPSKLSVKLK----GQ-----------------------VLFSGSLAKDVKVDDSTWTIDSQREVQIHLEKLN------GTSWWECVIQGHAKIDTTK 112
[Close]
BLAST of mRNA_F-serratus_M_contig1398.2855.1 vs. uniprot
Match: A0A1J5WL80_9MICR (Nuclear movement protein nudC n=1 Tax=Amphiamblys sp. WSBS2006 TaxID=1866961 RepID=A0A1J5WL80_9MICR)

HSP 1 Score: 57.0 bits (136), Expect = 6.080e-6
Identity = 44/156 (28.21%), Postives = 70/156 (44.87%), Query Frame = 0 
Query:  333 YAWNQSVREVQVSVKVPDWVRASDVRVDIGRSRLTVAARRAGAGESDTTRKRTQAEPLSSTGREWEEVVILAGPLSRPVQVDESVWTLETPGSVLLYLQKELPTDGEPGFEWWATVMEGDEEIDVVKC--DAGSDASQYPEHARQRGAKALWDYQQ 486
            Y W Q+ ++++V+ ++ +   +  V V I R+ +    +    GE                        ++ G L +PV+ +ES W++E    V++YLQK        G EWW  V+EG  +ID  KC  DA S      E  RQ   K L+D +Q
Sbjct:    7 YTWTQTTKDLEVAFELENREDSKKVSVSISRTEIHAGVK----GED----------------------AVIKGKLWKPVETEESTWSVEDGRKVVIYLQKSS------GPEWWPCVVEGGRKIDTTKCVPDASSLCDLTGE-TRQIAEKMLFDQRQ 129
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BLAST of mRNA_F-serratus_M_contig1398.2855.1 vs. uniprot
Match: A0A7R9Y333_9VIRI (Hypothetical protein (Fragment) n=2 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y333_9VIRI)

HSP 1 Score: 58.2 bits (139), Expect = 1.910e-5
Identity = 47/136 (34.56%), Postives = 65/136 (47.79%), Query Frame = 0 
Query:  324 NGGECRNGLYAWNQSVREVQVSVKVPDWVRASDVRVDIGRSRLTVAARRAGAGESDTTRKRTQAEPLSSTGREWEEVVILAGPLSRPVQVDESVWTLETPGSVLLYLQKELPTDGEPGFEWWATVMEGDEEIDVVK 459
            NGGE     Y W Q++ EV+V V VP    A  + V I ++ L+VA +    G+          EP            I++G LS+PV VDES+W+LE    V++   K           WW+ V+EGD EID  K
Sbjct:  215 NGGEADG--YTWTQTLSEVEVRVLVPQGTPARALDVRISKNALSVALK----GQ----------EP------------IVSGDLSKPVVVDESMWSLEDKTWVVVTFTKV------DQMCWWSCVLEGDVEIDTQK 316
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1398.2855.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5JDC5_9PHAE5.540e-11338.91CS domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S3VZL0_EMIHU5.270e-1035.58Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
A0A7S3RJ00_EMIHU7.550e-1035.03Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
R1DA98_EMIHU9.500e-1035.92CS domain-containing protein n=1 Tax=Emiliania hux... [more]
R1D443_EMIHU1.860e-935.92CS domain-containing protein n=1 Tax=Emiliania hux... [more]
R1FSV2_EMIHU1.960e-935.62CS domain-containing protein n=1 Tax=Emiliania hux... [more]
R4XDE4_TAPDE1.290e-828.57Nuclear movement protein n=1 Tax=Taphrina deforman... [more]
A0A1Y2FNN0_PROLT4.050e-627.56Nuclear movement protein nudC n=1 Tax=Protomyces l... [more]
A0A1J5WL80_9MICR6.080e-628.21Nuclear movement protein nudC n=1 Tax=Amphiamblys ... [more]
A0A7R9Y333_9VIRI1.910e-534.56Hypothetical protein (Fragment) n=2 Tax=Prasinoder... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 492..526
NoneNo IPR availableCOILSCoilCoilcoord: 190..217
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 157..190
e-value: 4.0
score: 16.4
coord: 74..107
e-value: 0.36
score: 19.9
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 312..463
e-value: 7.1E-23
score: 82.8
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 328..460
IPR007052CS domainPFAMPF04969CScoord: 333..432
e-value: 1.0E-8
score: 36.0
IPR007052CS domainPROSITEPS51203CScoord: 328..449
score: 12.566
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 3..107
e-value: 9.6E-8
score: 33.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 149..216
e-value: 4.8E-10
score: 41.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 15..212
IPR037898NudC familyPANTHERPTHR12356NUCLEAR MOVEMENT PROTEIN NUDCcoord: 185..505

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1398contigF-serratus_M_contig1398:19425..22575 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1398.2855.1mRNA_F-serratus_M_contig1398.2855.1Fucus serratus malemRNAF-serratus_M_contig1398 19269..22667 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1398.2855.1 ID=prot_F-serratus_M_contig1398.2855.1|Name=mRNA_F-serratus_M_contig1398.2855.1|organism=Fucus serratus male|type=polypeptide|length=549bp
MLANHTAGKNFISDACILYAEALQTLAKVDACIARLPRDDDVATVSQPKI
SKEYQENNAEERAGLSNRADTLRPSLYLNLAACNLLLHEWAAAVACCTQV
LERCGDGIIEAVASAAESSRDGCGSNGQQRAGGKGHHDESNISNGNNTSM
WCREMAAKALYRRSSARDGEGDLGLAREDLSTALKLKPGDANIRRELKKV
EKHLAEKEAKAKLKRETEEGRRRNRLRQEERHASPLSQTKITTTAFPVGD
GSKPSMRSSALAPVSAGKEGPEEPCEHEQDLASRACQAVPQADSNDEQGS
LQDPATPPGEGEGEAQVEPFPTKNGGECRNGLYAWNQSVREVQVSVKVPD
WVRASDVRVDIGRSRLTVAARRAGAGESDTTRKRTQAEPLSSTGREWEEV
VILAGPLSRPVQVDESVWTLETPGSVLLYLQKELPTDGEPGFEWWATVME
GDEEIDVVKCDAGSDASQYPEHARQRGAKALWDYQQMTPEERREEELNEQ
RMREAKRQMAEEVEERERNLANALKDPNKAEMYRKLREVMPDTPISMK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR008978HSP20-like_chaperone
IPR007052CS_dom
IPR011990TPR-like_helical_dom_sf
IPR037898NudC_fam