prot_F-serratus_M_contig1398.2854.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1398.2854.1
Unique Nameprot_F-serratus_M_contig1398.2854.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length100
Homology
BLAST of mRNA_F-serratus_M_contig1398.2854.1 vs. uniprot
Match: A0A6H5JG07_9PHAE (Rubredoxin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JG07_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 6.030e-46
Identity = 71/96 (73.96%), Postives = 78/96 (81.25%), Query Frame = 0
Query:    4 GDYECTQCSFVYSPFKDGQGALSGTQFEELPSTWLCPVCKSPKDTFVAQTKTIAGFEDNQQYGLGANSMTAGQKNLLIFGSLAAFFLLFLGGYLLE 99
            GD+EC QC FVY P   GQGAL GTQF++LPSTW+CPVCK+PKDTF AQTKTIAGFEDN  YG GAN MT  QKNLLIFG L AFF+LFL GY L+
Sbjct:  135 GDHECLQCGFVYKPENAGQGALPGTQFDDLPSTWICPVCKAPKDTFFAQTKTIAGFEDNANYGFGANQMTGSQKNLLIFGGLFAFFVLFLAGYALD 230          
BLAST of mRNA_F-serratus_M_contig1398.2854.1 vs. uniprot
Match: A0A7S2RF64_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RF64_9STRA)

HSP 1 Score: 120 bits (302), Expect = 3.960e-33
Identity = 60/96 (62.50%), Postives = 68/96 (70.83%), Query Frame = 0
Query:    4 GDYECTQCSFVYSPFKDGQGALSGTQFEELPSTWLCPVCKSPKDTFVAQTKTIAGFEDNQQYGLGANSMTAGQKNLLIFGSLAAFFLLFLGGYLLE 99
            G  EC  C +VY        A  GTQF ELPS+W CP C S K  F  QT+T+AGFE+N QYG G N+MTAG+KN LIFGSLAAFF+LFLGGYLLE
Sbjct:   51 GRAECKTCGYVYDE------ATEGTQFVELPSSWRCPQCLSQKGFFEVQTRTLAGFEENLQYGFGTNTMTAGEKNNLIFGSLAAFFVLFLGGYLLE 140          
BLAST of mRNA_F-serratus_M_contig1398.2854.1 vs. uniprot
Match: A0A0G4EEM1_VITBC (Rubredoxin-like domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EEM1_VITBC)

HSP 1 Score: 120 bits (300), Expect = 1.120e-31
Identity = 57/98 (58.16%), Postives = 73/98 (74.49%), Query Frame = 0
Query:    4 GDYECTQCSFVYSPFKDGQGAL--SGTQFEELPSTWLCPVCKSPKDTFVAQTKTIAGFEDNQQYGLGANSMTAGQKNLLIFGSLAAFFLLFLGGYLLE 99
            GDY+C  C +VY  +K G G    + T++E++P+ W CP CK+PK+ F   T+TIAGF DNQ YG+G N++TAGQKN+LIFGSL  FFLLFL GYLLE
Sbjct:  142 GDYQCRNCGYVYR-WKQGDGIYLKANTKWEDVPTWWKCPNCKAPKNYFNPITRTIAGFADNQGYGIGTNTLTAGQKNVLIFGSLGLFFLLFLSGYLLE 238          
BLAST of mRNA_F-serratus_M_contig1398.2854.1 vs. uniprot
Match: A0A6S9ELN9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9ELN9_HETAK)

HSP 1 Score: 118 bits (295), Expect = 2.830e-31
Identity = 55/96 (57.29%), Postives = 68/96 (70.83%), Query Frame = 0
Query:    4 GDYECTQCSFVYSPFKDGQGALSGTQFEELPSTWLCPVCKSPKDTFVAQTKTIAGFEDNQQYGLGANSMTAGQKNLLIFGSLAAFFLLFLGGYLLE 99
            G+++C+QC++VY P +  +  L GT F +LP+ + CP C +PK  F A T TIAGFEDNQ YG G NSMT  QKN LIFG LA FF LFL GYLL+
Sbjct:  111 GEFQCSQCNYVYKPDEGERNILPGTSFADLPTGYQCPECGAPKSFFDALTVTIAGFEDNQGYGFGTNSMTGDQKNTLIFGGLAFFFALFLSGYLLD 206          
BLAST of mRNA_F-serratus_M_contig1398.2854.1 vs. uniprot
Match: A0A7S0GMA1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GMA1_9EUKA)

HSP 1 Score: 117 bits (293), Expect = 1.140e-30
Identity = 56/95 (58.95%), Postives = 65/95 (68.42%), Query Frame = 0
Query:    4 GDYECTQCSFVYSPFKDGQGAL--SGTQFEELPSTWLCPVCKSPKDTFVAQTKTIAGFEDNQQYGLGANSMTAGQKNLLIFGSLAAFFLLFLGGY 96
            GD+EC +C FVY        +L   GT FE+LP  WLCPVC  PKDTF  Q K +AGF +NQ YG G NS+T GQK+ LI+GSLAAFF LFL GY
Sbjct:  137 GDFECVECQFVYKAENGDPESLIAKGTAFEDLPEDWLCPVCGQPKDTFEEQGKIVAGFAENQGYGFGTNSLTEGQKSALIYGSLAAFFALFLLGY 231          
BLAST of mRNA_F-serratus_M_contig1398.2854.1 vs. uniprot
Match: A0A2V3IE15_9FLOR (Rubredoxin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE15_9FLOR)

HSP 1 Score: 114 bits (284), Expect = 1.500e-29
Identity = 55/96 (57.29%), Postives = 65/96 (67.71%), Query Frame = 0
Query:    4 GDYECTQCSFVYSPFKDGQ---GALSGTQFEELPSTWLCPVCKSPKDTFVAQTKTIAGFEDNQQYGLGANSMTAGQKNLLIFGSLAAFFLLFLGGY 96
            G YEC  C + Y P K G+   G   GT FE+LP+T+ CPVC++PK  F+++ K IAGF DNQ YG G NSMTAGQKNLLIFG L    LL L GY
Sbjct:  115 GRYECPACGYTYEP-KQGEKQAGIQPGTPFEQLPATYFCPVCRTPKSRFISKKKVIAGFADNQSYGFGTNSMTAGQKNLLIFGGLVFAALLLLSGY 209          
BLAST of mRNA_F-serratus_M_contig1398.2854.1 vs. uniprot
Match: A0A7S3K377_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K377_9STRA)

HSP 1 Score: 112 bits (279), Expect = 4.830e-29
Identity = 56/102 (54.90%), Postives = 69/102 (67.65%), Query Frame = 0
Query:    1 RHAGDYECTQCSFVYSPFKDGQ---GALSGTQFEELPSTWLCPVCKSPKDTFVAQTKTIAGFEDNQQYGLGANSMTAGQKNLLIFGSLAAFFLLFLGGYLLE 99
            +  G Y C  CS+ Y P + GQ   G   GT F +LP++W CP C++ KD F  QT TIAGF +NQ YGLG N+MT   K+ LIFGSLAAFF+LF+GGYLL 
Sbjct:   90 QETGIYICKVCSYKYDP-EVGQPIGGIQPGTPFSQLPASWRCPTCRAQKDAFEPQTLTIAGFAENQGYGLGGNAMTEESKSTLIFGSLAAFFVLFMGGYLLN 190          
BLAST of mRNA_F-serratus_M_contig1398.2854.1 vs. uniprot
Match: B5YMM0_THAPS (Rubredoxin, rubredoxin-type Fe4 protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YMM0_THAPS)

HSP 1 Score: 109 bits (273), Expect = 1.030e-28
Identity = 53/103 (51.46%), Postives = 66/103 (64.08%), Query Frame = 0
Query:    1 RHAGDYECTQCSFVYSPFKDGQGALSG-----TQFEELPSTWLCPVCKSPKDTFVAQTKTIAGFEDNQQYGLGANSMTAGQKNLLIFGSLAAFFLLFLGGYLL 98
            R  G ++C+ C + Y P K     + G     T FEELPS W CP C++ KD+F    +TI GFE NQ YG G N+MT G+KN LI+G LAAFFLLF+GGY L
Sbjct:   39 RSTGIHKCSNCDWEYDPAKGDSFLIGGMIKPDTPFEELPSNWRCPTCRASKDSFREVVETIPGFEVNQGYGFGTNAMTTGEKNALIWGGLAAFFLLFIGGYAL 141          
BLAST of mRNA_F-serratus_M_contig1398.2854.1 vs. uniprot
Match: C1EAE7_MICCC (Rubredoxin-like domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EAE7_MICCC)

HSP 1 Score: 109 bits (273), Expect = 2.910e-28
Identity = 51/100 (51.00%), Postives = 70/100 (70.00%), Query Frame = 0
Query:    3 AGDYECTQCSFVYSPFKDGQG---ALSGTQFEELPSTWLCPVCKSPKDTFVAQTKTIAGFEDNQQYGLGANSMTAGQKNLLIFGSLAAFFLLFLGGYLLE 99
            +G+++C  C +VY+P K+G       SGT F++LP  WLCP C +   TF +  K +AGFE NQ YG G NSM+ G+K++LI+G+LA FF LFLGGYLL+
Sbjct:   81 SGEHQCQSCLYVYNP-KNGDPDYPVASGTAFKDLPEDWLCPTCGAAPKTFKSLGKEVAGFEQNQGYGFGTNSMSGGEKSILIYGALALFFALFLGGYLLD 179          
BLAST of mRNA_F-serratus_M_contig1398.2854.1 vs. uniprot
Match: A0A7S0ZKG2_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZKG2_9RHOD)

HSP 1 Score: 110 bits (274), Expect = 3.540e-28
Identity = 56/98 (57.14%), Postives = 63/98 (64.29%), Query Frame = 0
Query:    4 GDYECTQCSFVYSPFKDGQ--GALSGTQFEELPSTWLCPVCKSPKDTFVAQTKTIAGFEDNQQYGLGANSMTAGQKNLLIFGSLAAFFLLFLGGYLLE 99
            G +EC  CS+VY P K  Q  G   G  F+ LP T+ CP CKS K  F +  K IAGF DNQ YG G N+ T  QK+ LIFG LAAFFLLFL GYLLE
Sbjct:  103 GQFECQNCSYVYDPKKGDQYAGVKPGLPFDMLPETFSCPGCKSDKSEFKSIKKVIAGFADNQSYGFGTNTWTEAQKSGLIFGGLAAFFLLFLSGYLLE 200          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1398.2854.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JG07_9PHAE6.030e-4673.96Rubredoxin-like domain-containing protein n=2 Tax=... [more]
A0A7S2RF64_9STRA3.960e-3362.50Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0G4EEM1_VITBC1.120e-3158.16Rubredoxin-like domain-containing protein n=2 Tax=... [more]
A0A6S9ELN9_HETAK2.830e-3157.29Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0GMA1_9EUKA1.140e-3058.95Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A2V3IE15_9FLOR1.500e-2957.29Rubredoxin n=1 Tax=Gracilariopsis chorda TaxID=448... [more]
A0A7S3K377_9STRA4.830e-2954.90Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
B5YMM0_THAPS1.030e-2851.46Rubredoxin, rubredoxin-type Fe4 protein (Fragment)... [more]
C1EAE7_MICCC2.910e-2851.00Rubredoxin-like domain-containing protein n=1 Tax=... [more]
A0A7S0ZKG2_9RHOD3.540e-2857.14Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024935Rubredoxin domainPRINTSPR00163RUBREDOXINcoord: 5..21
score: 31.73
coord: 33..49
score: 48.3
IPR024935Rubredoxin domainPFAMPF00301Rubredoxincoord: 6..49
e-value: 1.2E-12
score: 47.7
NoneNo IPR availableGENE3D2.20.28.10coord: 1..56
e-value: 5.7E-16
score: 59.8
NoneNo IPR availablePANTHERPTHR47627FAMILY NOT NAMEDcoord: 3..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..98
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 99..99
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..78
NoneNo IPR availableSUPERFAMILY57802Rubredoxin-likecoord: 5..66
NoneNo IPR availableTMHMMTMhelixcoord: 79..98
IPR024934Rubredoxin-like domainPROSITEPS50903RUBREDOXIN_LIKEcoord: 3..52
score: 11.021

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1398contigF-serratus_M_contig1398:2732..3031 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1398.2854.1mRNA_F-serratus_M_contig1398.2854.1Fucus serratus malemRNAF-serratus_M_contig1398 2732..3031 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1398.2854.1 ID=prot_F-serratus_M_contig1398.2854.1|Name=mRNA_F-serratus_M_contig1398.2854.1|organism=Fucus serratus male|type=polypeptide|length=100bp
RHAGDYECTQCSFVYSPFKDGQGALSGTQFEELPSTWLCPVCKSPKDTFV
AQTKTIAGFEDNQQYGLGANSMTAGQKNLLIFGSLAAFFLLFLGGYLLE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024935Rubredoxin_dom
IPR024934Rubredoxin-like_dom