prot_F-serratus_M_contig1397.2849.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1397.2849.1
Unique Nameprot_F-serratus_M_contig1397.2849.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length358
Homology
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BLAST of mRNA_F-serratus_M_contig1397.2849.1 vs. uniprot
Match: D7FII0_ECTSI (Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FII0_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 7.320e-22
Identity = 149/379 (39.31%), Postives = 174/379 (45.91%), Query Frame = 0 
Query:    1 MDGACFTLLGVIVGLKTPDADHWSVARALVESSVDLRTRNAKGMTPLHLACAGGQVDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLPVDCASTPAETTPLHLAGGFSREACVEELLHRGADPSKTNKRGATPLDLVGTLLAPNAHSSDGSGQMRAALEQGAQVKRVRLMLIKATRWRRRRDAVLLCEALRSK---VIVPASSAP-------------------KRSRGSLSRASAEKFFFSGQGWVIEQLCAQPEPLLIRNVIRFL 357
            +DGA  TLLGV   L TP  D+W VARAL+ES+ DLRTRN +GMTPLHLAC+ G+VD  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                              AG  VD  STPA                  ELL RGADPS+ NKRGATPLD+ G    P   S        A  ++ A+ +RVRL L  A RW+R+R  VL+CE LR +   V+  A  A                    +R R SL+  S      S QGW++ QLC   +P L++ VI FL
Sbjct:  122 LDGARLTLLGVSKALNTPVQDNWEVARALLESNTDLRTRNDRGMTPLHLACSTGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKASDLGTTALHNAGFTPLHVAARCGRLTALRALLD----------------------------------------------------------AGEAVDSPSTPAXXXXXXXXXXXXXXXXXXELLLRGADPSRRNKRGATPLDMGG----PETMSGKAKLAREAFEKKLAEGERVRLALTSAQRWQRKRGMVLVCETLRKRANAVLALADGASDGGALAGRERLERDHGDTKRRFRRSLAGGSVASAVPS-QGWLVAQLCVHADPALMKGVIEFL 437
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BLAST of mRNA_F-serratus_M_contig1397.2849.1 vs. uniprot
Match: D7FLL7_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL7_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 8.560e-5
Identity = 56/161 (34.78%), Postives = 76/161 (47.20%), Query Frame = 0 
Query:  211 TPLHLAGGFSRE---ACVEELLHRGADPSKTNKRGATPLDLVGTLLAPNAHSSDGSGQMRAALEQGAQVKRVRLMLIKAT---RWRRRRDAVLLCEALRSKVIVPASSAPKRSRGS-LSRASAEK------FFFSGQGWVIEQLCAQPEP-LLIRNVIRFL 357
            TPLH A    RE   A ++ LL  GAD +  NKRG TPLD++G     N H S              +V R RL+L++A    RWRRR   V+L    RS+ IV A    K +  S LS   A +         +G    + +L  + EP  + R+V+ FL
Sbjct:  344 TPLHRACVEQREGLAASIDLLLRWGADETARNKRGRTPLDVLGATRTDNPHCSPD------------EVDRARLLLVRAPTDRRWRRRGWLVVL----RSRTIVVAHRCAKGASDSGLSLCQARRNGKGARIDVAGNSSGVVELLTELEPEAVFRSVLGFL 488
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1397.2849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FII0_ECTSI7.320e-2239.31Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FII0... [more]
D7FLL7_ECTSI8.560e-534.78Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 43..58
score: 41.38
coord: 157..171
score: 37.22
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 174..203
e-value: 1.1E-4
score: 31.6
coord: 75..104
e-value: 0.13
score: 21.3
coord: 108..137
e-value: 1.5
score: 17.9
coord: 208..237
e-value: 32.0
score: 13.4
coord: 141..170
e-value: 0.098
score: 21.8
coord: 42..71
e-value: 2.1E-5
score: 34.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 42..74
score: 14.613
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 108..140
score: 10.472
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 141..173
score: 11.648
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 174..206
score: 12.422
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 208..240
score: 9.751
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 75..107
score: 10.953
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 15..136
e-value: 1.6E-31
score: 111.0
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 137..306
e-value: 9.7E-33
score: 115.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 21..248
NoneNo IPR availablePFAMPF13637Ank_4coord: 25..63
e-value: 1.9E-7
score: 31.5
coord: 79..129
e-value: 1.1E-6
score: 29.0
NoneNo IPR availablePANTHERPTHR24198ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEINcoord: 127..248
coord: 22..198
NoneNo IPR availablePANTHERPTHR24198:SF175ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 1coord: 127..248
coord: 22..198
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..357
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 146..238
e-value: 1.1E-13
score: 51.5
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 24..248
score: 66.691

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1397contigF-serratus_M_contig1397:43779..46132 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1397.2849.1mRNA_F-serratus_M_contig1397.2849.1Fucus serratus malemRNAF-serratus_M_contig1397 41136..50728 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1397.2849.1 ID=prot_F-serratus_M_contig1397.2849.1|Name=mRNA_F-serratus_M_contig1397.2849.1|organism=Fucus serratus male|type=polypeptide|length=358bp
MDGACFTLLGVIVGLKTPDADHWSVARALVESSVDLRTRNAKGMTPLHLA
CAGGQVDVAKVLLLAGADAHARDHRSRCPLHMAALSGSEELANALLTCGA
NPNKASDLGTTALHNAALLGRVGVCRALLMARADPNATDHNSFSPLYLAA
QNGHTQVVLDLLASGADASIKTTRGFTPLHVAARCGRLTVLRVLLDAGLP
VDCASTPAETTPLHLAGGFSREACVEELLHRGADPSKTNKRGATPLDLVG
TLLAPNAHSSDGSGQMRAALEQGAQVKRVRLMLIKATRWRRRRDAVLLCE
ALRSKVIVPASSAPKRSRGSLSRASAEKFFFSGQGWVIEQLCAQPEPLLI
RNVIRFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom