prot_F-serratus_M_contig1393.2833.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1393.2833.1
Unique Nameprot_F-serratus_M_contig1393.2833.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length871
Homology
BLAST of mRNA_F-serratus_M_contig1393.2833.1 vs. uniprot
Match: D7FJT5_ECTSI (Splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJT5_ECTSI)

HSP 1 Score: 519 bits (1336), Expect = 9.330e-169
Identity = 453/764 (59.29%), Postives = 486/764 (63.61%), Query Frame = 0
Query:  144 RPPPTRLPPNLPALQRMGT-PGSSGE--------PSPKGPGRGSDS--SGLKKSYSRFSSPASVDSSSRGSGSISINVYVGKLKPEVDNYLVEDLLACCGRVDKWNRAVDPSTDLPKAFGFCTYRTAEAAAVSVQVLNDLELAGQAILVKVGKKEQPSLEAFLSPKDEEAAKKHQTLLDTVKTKIQNVLYRHGERSRPEGAAANDGDINASSGRISPSTSTGRSPSRDGKDASSRGREDDDGGSGGAQPA----------ATKPKPKKDWVRFDGAAMLLSSAGWSDDEDEEKEELITSEIEKFRQKQAERDKKLEDERRQELQRKIKEAXXXXXXXXXXXXXXXXXXXXXXXXXMVAMAAMQSRESKE-----KESLGERGSGGRSSVDRDXXXXXXXXXXXXXXXXXXXXXXXXXX-----------RRSSDRDRERSXXXXXXXXXXXXXXXXXXXXXXXXXXXDNEDXXXXXXXGDRGAVDKERNGRAERNRDLEREEMDAKRAARAKLAEEEMHKRRLAVLSALETAGHDDDDDEYADGAADREVRERAGGRFVSVRRDGEGSRSSEGNGAVSGVVNERQREEMRRRRAVLAALGEDVPDSEDXXXXXXXXXXXXXXXXXXXXXXETVEDDADANTEAEEPKAPAVVEKKGKARDKELVGSIPKDREELFAYEINWQVVEAHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFILTKLGQRAPPQTILDELKLVLEEDAAVFMTKMWRMLVFCTLRVQERA 870
            RPPP RLPPNLPALQ MG  PG            P   G GRG  +  +G                     G  SINVYVGKLKPE DN LV++LL CCGRV+KWNRAVDPSTDLPKAFGFCTY  A+AAA+SVQ+LNDLELAGQ ILVKVGKKEQPSLEAFLSPKDEE AKKHQ LLDTVK KI +VL R+GERS P   ++  G+ N+  G+ SP +    SPSR G+  SS+     DGG G                   K +KDWVR+DGAAMLLSSAGWS+DEDEEKEELITSEIEKFRQKQAERDKKLEDERRQELQRKIK  XXXXXXXXXXXXXXXXXXX      MVAMAAM+SR+ K+     K+   E G    S   RDXXXXXXXXXXXXXXXXXXXXXXXXXX            RSSDRD                 XXXXXXXXXXXX    +D       G R +   +               M+AKRAARAKLAEEE  KRRLAVLSALE AG+D D                                                                       XXXXXXXXXXXXXXXXXXXXXX T   + DA  E  E K  AVVEKKGKARDKELVGSIPKDREELFAYEINWQ+VE HNIIQSKMRPWIVKKIIEYLGEEEKTLTEF+LTKLGQRA PQTILDELKLVLEEDAAVFMTKMWRMLVFCTLR  ERA
Sbjct:   61 RPPPPRLPPNLPALQGMGKHPGGXXXXXXXXXXXPDKMGMGRGGKNGPNGXXXXXXXXXXXXXXXXXXXXXGGPSINVYVGKLKPETDNSLVQELLTCCGRVEKWNRAVDPSTDLPKAFGFCTYHNAQAAAISVQLLNDLELAGQPILVKVGKKEQPSLEAFLSPKDEEYAKKHQVLLDTVKAKIDSVLVRYGERSAPGKGSSKGGNANSDGGK-SPVSVGASSPSRSGR-GSSKXXGKGDGGKGXXXXXYQXXXXXXXXXXXXKSRKDWVRYDGAAMLLSSAGWSEDEDEEKEELITSEIEKFRQKQAERDKKLEDERRQELQRKIKXXXXXXXXXXXXXXXXXXXXXDREAREMVAMAAMKSRDDKDTAADQKKGGDEDGKKPSSPNGRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRRERSSDRD---------------GGXXXXXXXXXXXXDSRRDDHRDSDRGGGRSSGGDKDXXXXXXXXXXXXXXMEAKRAARAKLAEEETRKRRLAVLSALENAGNDGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGGEGDAGKEGSESKVAAVVEKKGKARDKELVGSIPKDREELFAYEINWQMVEQHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFVLTKLGQRAKPQTILDELKLVLEEDAAVFMTKMWRMLVFCTLRAMERA 800          
BLAST of mRNA_F-serratus_M_contig1393.2833.1 vs. uniprot
Match: A0A7S2CNP4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CNP4_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.730e-33
Identity = 63/106 (59.43%), Postives = 82/106 (77.36%), Query Frame = 0
Query:  763 KARDKELVGSIPKDREELFAYEINWQVVEAHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFILTKLGQRAPPQTILDELKLVLEEDAAVFMTKMWRMLVFCTLRVQE 868
            K RDK +V  IPKD+  LF++ I+W V++AH I+ + MRPWIVKKI+EYLGEEEKTL +FI+TKL Q + P  ILDELKLVL++DA  F+ KMWRML F  +++ E
Sbjct:   36 KERDKRIVDRIPKDKATLFSFPIHWDVLDAHRIVATNMRPWIVKKIVEYLGEEEKTLIDFIITKLDQHSNPHAILDELKLVLDDDAETFVLKMWRMLAFHGIKLAE 141          
BLAST of mRNA_F-serratus_M_contig1393.2833.1 vs. uniprot
Match: A0A835Z4I4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4I4_9STRA)

HSP 1 Score: 143 bits (360), Expect = 3.200e-31
Identity = 68/103 (66.02%), Postives = 81/103 (78.64%), Query Frame = 0
Query:  763 KARDKELVGSIPKDREELFAYEINWQVVEAHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFILTKLGQRAPPQTILDELKLVLEEDAAVFMTKMWRMLVFCTLR 865
            K RDK LV  IPKD++ LFAY ++W VV +H I+ +KMRPW+V+KI EYLGEEE TL +F+  KL  RAPPQ +LDEL+LVLEEDA VF  KMWRMLVFC LR
Sbjct:  656 KDRDKVLVDMIPKDKDALFAYPLDWGVVTSHGIVANKMRPWVVRKIREYLGEEEPTLIDFVCAKLEARAPPQAVLDELRLVLEEDAEVFTVKMWRMLVFCALR 758          
BLAST of mRNA_F-serratus_M_contig1393.2833.1 vs. uniprot
Match: A0A7S2XWQ2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWQ2_9STRA)

HSP 1 Score: 132 bits (332), Expect = 5.100e-31
Identity = 59/104 (56.73%), Postives = 83/104 (79.81%), Query Frame = 0
Query:  767 KELVGSIPKDREELFAYEINWQVVEAHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFILTKLGQRAPPQTILDELKLVLEEDAAVFMTKMWRMLVFCTLRVQERA 870
            K+LV  IPK++  LFAY++NW +V  H+++ SK+RPW+ KKI EYLGEEE+TL +FI+++L +RA PQ+ILDEL LVL+EDA +F  K+WRML+F  LR+ + A
Sbjct:  140 KDLVDRIPKEKRALFAYKVNWDLVHKHDVVGSKLRPWVSKKITEYLGEEERTLIDFIVSQLMERAHPQSILDELALVLDEDAEIFTVKLWRMLIFHELRIAQGA 243          
BLAST of mRNA_F-serratus_M_contig1393.2833.1 vs. uniprot
Match: A0A7S3UVP2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVP2_HETAK)

HSP 1 Score: 125 bits (313), Expect = 4.820e-29
Identity = 57/106 (53.77%), Postives = 82/106 (77.36%), Query Frame = 0
Query:  765 RDKELVGSIPKDREELFAYEINWQVVEAHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFILTKLGQRAPPQTILDELKLVLEEDAAVFMTKMWRMLVFCTLRVQERA 870
            + K LV  IPK++  LFAY + W VV+ H+II+SK++ WIVKKI+E+LGEEE+TL +FI +KL   A P++IL+ELKLVL++DA +FM K+WRML+F  L++   +
Sbjct:   90 KQKALVDRIPKEKAALFAYPVAWAVVDEHDIIKSKLKAWIVKKIVEFLGEEEETLIDFICSKLISHADPESILEELKLVLDDDAEIFMVKLWRMLIFHVLKLSSSS 195          
BLAST of mRNA_F-serratus_M_contig1393.2833.1 vs. uniprot
Match: K3WIU2_GLOUD (PWI domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WIU2_GLOUD)

HSP 1 Score: 118 bits (296), Expect = 4.460e-24
Identity = 56/102 (54.90%), Postives = 73/102 (71.57%), Query Frame = 0
Query:  767 KELVGSIPKDREELFAYEINWQVVEAHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFILTKLGQRAPPQTILDELKLVLEEDAAVFMTKMWRMLVFCTLRVQE 868
            K L+  IP +  ELF+Y I+W  V+ H I+ +KM PW+ KKIIEYLGEEE TL EFIL KL QRA P+ IL EL+LVL++DA VF+  +WR L F  +R ++
Sbjct:  452 KSLIEQIPTETTELFSYPIDWMAVDKHKIVAAKMAPWVAKKIIEYLGEEEPTLIEFILKKLDQRAKPEEILTELQLVLDDDAEVFVKLLWRKLAFEAIRSEQ 553          
BLAST of mRNA_F-serratus_M_contig1393.2833.1 vs. uniprot
Match: A0A6B2L9W9_9EUKA (PWI domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L9W9_9EUKA)

HSP 1 Score: 112 bits (280), Expect = 2.230e-23
Identity = 52/100 (52.00%), Postives = 72/100 (72.00%), Query Frame = 0
Query:  767 KELVGSIPKDREELFAYEINWQVVEAHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFILTKLGQRAPPQTILDELKLVLEEDAAVFMTKMWRMLVFCTLRV 866
            K L+  IP ++E LFAY I+W +VE   I++ KMRPW+ KKI+E L EEE TL E+I  KL   + PQ ILD+L++VL+++A+ F+ KMWRML+F  L V
Sbjct:  219 KTLIDQIPVEKEALFAYVIDWAIVEEKQIVEQKMRPWVTKKIVELLDEEEPTLIEYICKKLCDHSSPQDILDQLQVVLDDEASAFVIKMWRMLIFNMLNV 318          
BLAST of mRNA_F-serratus_M_contig1393.2833.1 vs. uniprot
Match: A0A813JGK3_POLGL (Hypothetical protein (Fragment) n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JGK3_POLGL)

HSP 1 Score: 105 bits (262), Expect = 2.710e-23
Identity = 47/101 (46.53%), Postives = 72/101 (71.29%), Query Frame = 0
Query:  769 LVGSIPKDREELFAYEINWQVVEAHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFILTKLGQRAPPQTILDELKLVLEEDAAVFMTKMWRMLVFCTLRVQER 869
            L+  +P D+++ F +EI+WQ V  HNII+ K+RPW+ KK+ E+LG EE+ + EFI+ K+  ++ P+ IL EL+  L+++A  F  KMWRML+F  LRV+ R
Sbjct:    7 LIKQVPTDKKKAFEFEIDWQCVHDHNIIEKKLRPWVKKKVTEFLGNEEQGMIEFIMRKVTAQSKPEGILAELEGFLDDEAENFTLKMWRMLIFEVLRVKAR 107          
BLAST of mRNA_F-serratus_M_contig1393.2833.1 vs. uniprot
Match: L8H642_ACACA (PWI domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H642_ACACA)

HSP 1 Score: 116 bits (291), Expect = 3.810e-23
Identity = 50/111 (45.05%), Postives = 79/111 (71.17%), Query Frame = 0
Query:  758 VEKKGKARDKELVGSIPKDREELFAYEINWQVVEAHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFILTKLGQRAPPQTILDELKLVLEEDAAVFMTKMWRMLVFCTLRVQE 868
            ++K+ +   K++V  IP  + +LF ++++W +V+   I+Q +M+PW+ KKI+EYLGEEE TL EF+L K+     PQ ILD+L  VLE++A VF+ K+WRML+F  +R Q+
Sbjct:  573 IKKEREEEAKQIVAMIPASKADLFNFQLSWDIVDEAEIVQKRMKPWVTKKIVEYLGEEEATLIEFVLAKMSNHMAPQEILDQLAFVLEDEAEVFVIKLWRMLIFEMIRAQK 683          
BLAST of mRNA_F-serratus_M_contig1393.2833.1 vs. uniprot
Match: A0A7S0I375_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I375_9EUKA)

HSP 1 Score: 103 bits (258), Expect = 9.120e-23
Identity = 46/95 (48.42%), Postives = 68/95 (71.58%), Query Frame = 0
Query:  767 KELVGSIPKDREELFAYEINWQVVEAHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFILTKLGQRAPPQTILDELKLVLEEDAAVFMTKMWRMLVF 861
            K+L+G+IP  R+EL+A  + W  VE   ++ +K+RPW+ KK+ E +GEEE TL EF++ KLG+R P + I +ELK VL++DA     K+WRML+F
Sbjct:    3 KQLIGTIPTKRDELYATPVGWDAVERGGLLAAKIRPWLGKKVAELMGEEEDTLVEFVVGKLGERQPAEAIEEELKKVLDDDAEGLCVKLWRMLLF 97          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1393.2833.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJT5_ECTSI9.330e-16959.29Splicing factor PWI domain-containing protein / RN... [more]
A0A7S2CNP4_9STRA1.730e-3359.43Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835Z4I4_9STRA3.200e-3166.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2XWQ2_9STRA5.100e-3156.73Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3UVP2_HETAK4.820e-2953.77Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
K3WIU2_GLOUD4.460e-2454.90PWI domain-containing protein n=1 Tax=Globisporang... [more]
A0A6B2L9W9_9EUKA2.230e-2352.00PWI domain-containing protein n=1 Tax=Arcella inte... [more]
A0A813JGK3_POLGL2.710e-2346.53Hypothetical protein (Fragment) n=2 Tax=Polarella ... [more]
L8H642_ACACA3.810e-2345.05PWI domain containing protein n=1 Tax=Acanthamoeba... [more]
A0A7S0I375_9EUKA9.120e-2348.42Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 601..622
NoneNo IPR availableCOILSCoilCoilcoord: 428..469
NoneNo IPR availableGENE3D1.20.1390.10coord: 756..869
e-value: 2.4E-37
score: 129.3
NoneNo IPR availablePANTHERPTHR18806RBM25 PROTEINcoord: 483..863
coord: 118..485
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 209..282
e-value: 1.9E-8
score: 44.1
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 210..279
e-value: 1.2E-5
score: 25.1
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 208..286
score: 10.343
IPR002483PWI domainSMARTSM00311pwi_2coord: 792..865
e-value: 5.9E-20
score: 82.3
IPR002483PWI domainPFAMPF01480PWIcoord: 799..861
e-value: 1.5E-13
score: 50.8
IPR002483PWI domainPROSITEPS51025PWIcoord: 778..870
score: 32.457
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 207..259
e-value: 3.2E-11
score: 45.4
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 260..281
e-value: 3.2E-11
score: 45.4
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 200..290
IPR036483PWI domain superfamilySUPERFAMILY101233PWI domaincoord: 789..860

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1393contigF-serratus_M_contig1393:43794..52179 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1393.2833.1mRNA_F-serratus_M_contig1393.2833.1Fucus serratus malemRNAF-serratus_M_contig1393 43066..52241 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1393.2833.1 ID=prot_F-serratus_M_contig1393.2833.1|Name=mRNA_F-serratus_M_contig1393.2833.1|organism=Fucus serratus male|type=polypeptide|length=871bp
MQGGGPPRPPGGHGPHNGGGYGVPPGYNQGGYFPGAPPPRVMWGAGPGMG
RGMGPGQGGPVPGWGGGVMGPGMGRGMGPGMGPGMGPGMGHAGPGWGGRP
GMGMGGGHGMGMGGMGGMGINNQQGMASRGGGAGGPVMGTVAPRPPPTRL
PPNLPALQRMGTPGSSGEPSPKGPGRGSDSSGLKKSYSRFSSPASVDSSS
RGSGSISINVYVGKLKPEVDNYLVEDLLACCGRVDKWNRAVDPSTDLPKA
FGFCTYRTAEAAAVSVQVLNDLELAGQAILVKVGKKEQPSLEAFLSPKDE
EAAKKHQTLLDTVKTKIQNVLYRHGERSRPEGAAANDGDINASSGRISPS
TSTGRSPSRDGKDASSRGREDDDGGSGGAQPAATKPKPKKDWVRFDGAAM
LLSSAGWSDDEDEEKEELITSEIEKFRQKQAERDKKLEDERRQELQRKIK
EAQRREKQKEEDAKEKDKIARDREAREMVAMAAMQSRESKEKESLGERGS
GGRSSVDRDRESERRRGRSRSRSRSRSRERERKRGRRSSDRDRERSSDRD
RERSSDRYRDGDRDRERDRVRDRDNEDRSRDRDRGDRGAVDKERNGRAER
NRDLEREEMDAKRAARAKLAEEEMHKRRLAVLSALETAGHDDDDDEYADG
AADREVRERAGGRFVSVRRDGEGSRSSEGNGAVSGVVNERQREEMRRRRA
VLAALGEDVPDSEDEQEQEIEQEKASEEEAGTAAAAETVEDDADANTEAE
EPKAPAVVEKKGKARDKELVGSIPKDREELFAYEINWQVVEAHNIIQSKM
RPWIVKKIIEYLGEEEKTLTEFILTKLGQRAPPQTILDELKLVLEEDAAV
FMTKMWRMLVFCTLRVQERA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR002483PWI_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf
IPR036483PWI_dom_sf