prot_F-serratus_M_contig139.2816.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig139.2816.1
Unique Nameprot_F-serratus_M_contig139.2816.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length92
Homology
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BLAST of mRNA_F-serratus_M_contig139.2816.1 vs. uniprot
Match: D7FRA2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRA2_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 3.910e-28
Identity = 55/90 (61.11%), Postives = 68/90 (75.56%), Query Frame = 0 
Query:    2 GVPGGAYFDVLVVCLSAQVVGLFSSYGWYIYLLIPGYYSSVAAYWAFRQLSRWVGSQQPESGSEETSAKEQKRLAKKERKAARGPKFRVR 91
            GV GGAYFDV  VC++ Q+V  FS+YG YIY+L+PGYY+ +A YW FR+L  WV SQQ  + SEE SA + KR AKKERKAAR P+ R+R
Sbjct:  100 GVGGGAYFDVFAVCVAGQLVSTFSAYGTYIYMLVPGYYACLAGYWVFRKLGGWVRSQQELNASEEPSAADLKRQAKKERKAARAPRVRMR 189
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig139.2816.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRA2_ECTSI3.910e-2861.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008506SRP-independent targeting protein 2/TMEM208PFAMPF05620TMEM208_SND2coord: 8..82
e-value: 1.1E-10
score: 41.5
IPR008506SRP-independent targeting protein 2/TMEM208PANTHERPTHR13505FAMILY NOT NAMEDcoord: 6..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..48
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 49..91
NoneNo IPR availableTMHMMTMhelixcoord: 26..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig139contigF-serratus_M_contig139:584605..585307 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig139.2816.1mRNA_F-serratus_M_contig139.2816.1Fucus serratus malemRNAF-serratus_M_contig139 584498..586000 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig139.2816.1 ID=prot_F-serratus_M_contig139.2816.1|Name=mRNA_F-serratus_M_contig139.2816.1|organism=Fucus serratus male|type=polypeptide|length=92bp
MGVPGGAYFDVLVVCLSAQVVGLFSSYGWYIYLLIPGYYSSVAAYWAFRQ
LSRWVGSQQPESGSEETSAKEQKRLAKKERKAARGPKFRVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008506SND2/TMEM208