prot_F-serratus_M_contig139.2800.1 (polypeptide) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig139.2800.1 vs. uniprot
Match: A0A6H5L4T7_9PHAE (TFIIB-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4T7_9PHAE) HSP 1 Score: 294 bits (752), Expect = 1.140e-94 Identity = 152/276 (55.07%), Postives = 202/276 (73.19%), Query Frame = 0
Query: 1 MNAFREYSMRCSDCKDATDIYFDARSGDVICRECGVVMGERLIDDGQEWRTFSTDDHAGRADPSRCGDAVSPLLSAESNMNTFIEGGNNKKQTGRLQKAEGMAAKESTSEVALRA-CFARVREIAHNLGLPSSIQEDACLLLRKVEDKGLFKVKRDPRGKAMCAAVTYITCRTWSVSRSMKDVSKAVDIPLRDVNKACKHVFKNMDIDKG-AVRGTHLIPELCNKLEVPAFITMAAQNVAQKASKLDLVGGMMPSAVAAAAVLLVCSLWKPAACRD 274
M+ + +M C +C +DIY D R+G++ICR C VV+GER IDDG EW+T++ D + GRADP+RCG A SPLLSA+S MNT IEGG + K T +LQK +GMA KES SE AL+ F +VRE + LGL ++QE ACLLLRK ED GLFKVK+ RG A+C AVT +TCR W ++MK++S ++ L+ +NKA K + N++I++ ++RG H IP LC+KL +P F+++AA++ AQ+AS+ DLV GM PSAVAAAAVLLVCS W PAAC D
Sbjct: 1 MDRYMGSTMFCKECVAESDIYVDPRAGEIICRTCAVVIGERCIDDGAEWQTYAEDSNNGRADPNRCGAAASPLLSAKSGMNTLIEGGQDSKLTAKLQKLQGMAVKESASERALKMDFFGKVREFGNRLGLTHAMQEHACLLLRKAEDSGLFKVKKAERGVAICVAVTLLTCRQWRRGQTMKEMSTMFNVSLKALNKAVKKL-SNLEIERAPSLRGEHHIPLLCDKLGLPPFVSVAARHAAQQASRWDLVDGMKPSAVAAAAVLLVCSCWNPAACGD 275
BLAST of mRNA_F-serratus_M_contig139.2800.1 vs. uniprot
Match: A0A835YX77_9STRA (TFIIB-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX77_9STRA) HSP 1 Score: 140 bits (352), Expect = 3.320e-35 Identity = 91/260 (35.00%), Postives = 145/260 (55.77%), Query Frame = 0
Query: 11 CSDCKDATDIYFDARSGDVICRECGVVMGERLIDDGQEWRTFSTDDHAGRADPSRCGDAVSPLLSAESNMNTFIEGGNNKKQTGRLQKAEGMAAKESTSEV--ALRACFARVREIAHNLGLPSSIQEDACLLLRKVEDKGLFKVKRDPRGKAMCAAVTYITCRTWSVSRSMKDVSKAVDIPLRDVNKACKHVFKNM---DIDKGA---VRGTHLIPELCNKLEVPAFITMAAQNVAQKASKLDLVGGMMPSAVAAAAVLL 262
C +C+ + DI D +GD+ICR CG+V+ +R+I+D EWRT++ DD + DPSRC A L T+++GGN K L A A K + + + A+ A + +I LG+ I++ A LL++++ G F+ K G AMCAAV YI + R+ +++ A ++ R+V KA KH +++ D+ A + G HL+P LC+ L VP ++ AA+ +A + ++L L+ G+ P VAAAA L
Sbjct: 10 CPECR-SRDIVIDFGAGDIICRGCGLVVADRMIEDTAEWRTYADDDR-NKGDPSRCSGA----LEVGFGSTTYLKGGN-KSNASSLNAACITADKLAGAGITKAMLAALENLDDIGQRLGVSREIRQAAAHLLKQLDKGGRFRRKSGAGGSAMCAAVLYIALKRHRAGRTFGEMAPAANVDKREVAKAYKHASRHLPPPSNDEAADALILGEHLVPRLCDALGVPQ-VSQAAKEIATQCAELSLIDGIKPQVVAAAATWL 261
BLAST of mRNA_F-serratus_M_contig139.2800.1 vs. uniprot
Match: H3HBD3_PHYRM (TFIIB-type domain-containing protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=H3HBD3_PHYRM) HSP 1 Score: 136 bits (342), Expect = 4.790e-34 Identity = 86/260 (33.08%), Postives = 136/260 (52.31%), Query Frame = 0
Query: 11 CSDCKDATDIYFDARSGDVICRECGVVMGERLIDDGQEWRTFSTDDHAGR-ADPSRCGDAVSPLLSAESNMNTFIE----GGNNKKQTGRLQKAEGMAAKESTSEVALRACFARVREIAHNLGLPSSIQEDACLLLRKVEDKGLFKVKRDPRGKAMCAAVTYITCRTWSVSRSMKDVSKAVDIPLRDVNKACKHVFKNMDIDKGAVRGTHLIPELCNKLEVPAFITMAAQNVAQKASKLDLVGGMMPSAVAAAAVLLVCS 265
C +C A D+ D +GDV+CR CG+++GER+IDD EWRTF+ DD G A SR GD L++ S ++ GG +GR K +++ + ++ +R++E+A +L LP I E A + + E +G+ R P +M AV +I CR +RS+K+ +A +P R + K+ + + +DID + C++L +P M A VA+KA L+L G P AVAA+ + LV +
Sbjct: 10 CRECGSA-DVVTDFSAGDVVCRSCGMILGERIIDDSPEWRTFANDDRGGDPAAKSRVGDVADARLNSLSLTTYLVDPKKGGGGGDADSGRKHKRPNISS-DCAKVKRMQRNMSRIQEVADSLSLPKKIVEIALDVYAEAEKQGVNM--RGPERDSMAVAVLFIACRKAGNARSLKEFEEASGVPKRRIGKSFMSLQRRLDIDVKQATTDEYVQRFCSRLGLPNKTQMIAHAVAKKADSLELSNGQPPVAVAASVIYLVAA 265
BLAST of mRNA_F-serratus_M_contig139.2800.1 vs. uniprot
Match: A0A024GL73_9STRA (TFIIB-type domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024GL73_9STRA) HSP 1 Score: 132 bits (333), Expect = 8.760e-33 Identity = 90/268 (33.58%), Postives = 140/268 (52.24%), Query Frame = 0
Query: 7 YSMRCSDCKDATDIYFDARSGDVICRECGVVMGERLIDDGQEWRTFSTDDHAG-RADPSRCG--------DAVSPLLSAESNMNTFIEGGNNKKQTGRLQKAEGMAAKESTSEVALRACFARVREIAHNLGLPSSIQEDACLLLRKVEDKGLFKVKRDPRGKAMCAAVTYITCRTWSVSRSMKDVSKAVDIPLRDVNKACKHVFKNMDIDKGAVRGTHLIPELCNKLEVPAFITMAAQNVAQKASKLDLVGGMMPSAVAAAAVLLVCS 265
Y+ C DC + DI D +GDV+CR CG+V+GER++DD EWRTFS DD G A SR G +A + +S ++ N QT RL K KES + + R+REI+ L LP I E A + ++ E KG+ R P +++ AAV +I CR +R++K++ A + + + K+ + K ++ D T+ + C++L +PA + A +VA+KA L L G P+A+AA+ + LV +
Sbjct: 4 YAQSCVDC-GSDDIVTDYGAGDVVCRNCGIVLGERIVDDTPEWRTFSNDDRGGDAASKSRVGQLEDQGIENATLTTILVDSTLDKI----NGNTQTTRLPKLN----KESANIRRKQNMTNRIREISETLSLPKIIVECAMQVYQEAERKGILI--RGPEKESVAAAVVFIACRQAGHARTLKELEGASGVMKKKIGKSFLILKKQLNFDFQQATTTNYVERFCSRLGLPAKTQVIAHDVAKKAQTLGLTDGKSPTALAASVIYLVAA 260
BLAST of mRNA_F-serratus_M_contig139.2800.1 vs. uniprot
Match: A0A8J4ZHJ2_9CHEL (Transcription initiation factor IIB n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J4ZHJ2_9CHEL) HSP 1 Score: 133 bits (334), Expect = 1.130e-32 Identity = 89/267 (33.33%), Postives = 142/267 (53.18%), Query Frame = 0
Query: 2 NAFREYSMRCSDCKDATDIYFDARSGDVICRECGVVMGERLIDDGQEWRTFSTDDHAGRADPSRCGDAVSPLLSAESNMNTFIEGGNNKKQTGRLQKAEGMAAKE------STSEVALRACFARVREIAHNLGLPSSIQEDACLLLRKVEDKGLFKVKRDPRGKAMCAAVTYITCRTWSVSRSMKDVSKAVDIPLRDVNKACKHVFKNMDIDKGAVRGTHLIPELCNKLEVPAFITMAAQNVAQKASKLDLVGGMMPSAVAAAAVLL 262
N F + C A I D R+GD+IC+ECG+V+G+R++D G EWRTFS ++ +DPSR G A +PLL+ S+++T I G TG E AK +TS+ AL + F + + + LP +I + A L ++V D K R A+ +A YI CR V R+ K++ I +++ + K V K ++ + + + C+ L++P+ + AA ++AQKA +LD+V G P +VAAAA+ +
Sbjct: 20 NQFNSSQLMCPQHPSAALIE-DYRAGDMICQECGLVVGDRVVDVGSEWRTFSNEN--ANSDPSRVGSAENPLLNG-SDLSTVIGRG-----TGNASFDENGVAKYQNRRSMNTSDRALISAFREISNMCDRINLPKTITDRANNLFKQVHDG---KTLRGRCNDAIASACLYIACRQEGVPRTFKEICAISRISKKEIGRCFKLVLKALETNVNLITSGDFMSRFCSNLQLPSSVQRAATHIAQKAVELDVVSGRSPISVAAAAIYM 274
BLAST of mRNA_F-serratus_M_contig139.2800.1 vs. uniprot
Match: A0A8K1CU27_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CU27_PYTOL) HSP 1 Score: 131 bits (330), Expect = 2.560e-32 Identity = 86/263 (32.70%), Postives = 141/263 (53.61%), Query Frame = 0
Query: 7 YSMRCSDCKDATDIYFDARSGDVICRECGVVMGERLIDDGQEWRTFSTDDHAGR-ADPSRCGDAVSPLLSAESNMNTFI---EGGNNKKQTGRLQKAEGMAAKESTSEVALRACFARVREIAHNLGLPSSIQEDACLLLRKVEDKGLFKVKRDPRGKAMCAAVTYITCRTWSVSRSMKDVSKAVDIPLRDVNKACKHVFKNMDIDKGAVRGTHLIPELCNKLEVPAFITMAAQNVAQKASKLDLVGGMMPSAVAAAAVLLVCS 265
++ RC C + D+ D +GD++CRECG+++GER++DD EWR F+ DD G A SR G+A+ L + S + TF+ + + + R + G+ ES + A+++E+A L LP I E A + + E KG+ R P ++M AV +I CR +RS+K+ + A IP + K+ + KN++++ + C++L +P M A +VA+KA +L L G P+AVAA+ V LV +
Sbjct: 6 FTERCGAC-GSMDVVTDFGAGDIVCRECGLILGERIVDDSPEWRNFANDDRGGDPAAKSRVGEAMDHRLDSAS-LTTFLVDTKPSSKGAEGDRPHRRPGLKT-ESARVRRMEGMLAKIQEVADALALPKVIVEVAMDVYAEAEKKGVSM--RGPEKESMPVAVLFIACRKSGNARSLKEFAAASGIPKNRIGKSFMVLSKNLNLEMTQATTEEYVRRFCSRLGLPTKTQMIANDVAKKADELGLSTGKSPNAVAASVVYLVAA 263
BLAST of mRNA_F-serratus_M_contig139.2800.1 vs. uniprot
Match: UPI0006451B5A (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006451B5A) HSP 1 Score: 130 bits (328), Expect = 9.790e-32 Identity = 85/263 (32.32%), Postives = 148/263 (56.27%), Query Frame = 0
Query: 8 SMRCSDCKDAT-DIYFDARSGDVICRECGVVMGERLIDDGQEWRTFSTDDHAGRADPSRCGDAVSPLLSAESNMNTFIEGGNNKKQTGRLQKAEGMAAKESTSEVALRACFARVREIAHNLGLPSSIQEDACLLLRKVEDKGLFKVKRDPRGKAMCAAVTYITCRTWSVSRSMKDV-SKAVDIPLRDVNKACKHVFKNMD--IDKGAVRGTHLIPELCNKLEVPAFITMAAQNVAQKASKLDLVGGMMPSAVAAAAVLLVCSL 266
++ C CK+ DI D GD+ICRECGVV+G+R++D+ EWRTFS + G +DP+R G +PLLS +S ++T I GN+K +G L + + A S L F + + ++GLP + + A L +++EDK K + AA YI CR ++R+ K++ + + ++ +D+N+ K + +++ ++ A+ + C L++P I AA++V++ A++L +V G P +VAAA++ +V L
Sbjct: 30 NVTCPVCKNPDPDIVEDYARGDLICRECGVVIGDRIVDEHSEWRTFSNSESTG-SDPNRVGGPTNPLLS-DSGLSTVIGKGNSK-DSGALSRMQNRGALASGDRTLLNG-FKEISRMGDHMGLPQMVMDTANELYKQMEDKKSLKGRS---ADGFLAASLYIACRLKGITRTFKEICALSNNVSKKDLNRCYKLMKESLSTKVNLQAISTEDFMTRFCVNLQLPKEIKQAAEHVSRTATELGIVAGKNPISVAAASIYMVSQL 285
BLAST of mRNA_F-serratus_M_contig139.2800.1 vs. uniprot
Match: A0A8D3A2J0_SCOMX (Transcription initiation factor IIB n=4 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A8D3A2J0_SCOMX) HSP 1 Score: 129 bits (325), Expect = 1.760e-31 Identity = 90/256 (35.16%), Postives = 136/256 (53.12%), Query Frame = 0
Query: 9 MRCSDCKDATDIYFDARSGDVICRECGVVMGERLIDDGQEWRTFSTDDHAGRADPSRCGDAVSPLLSAESNMNTFIEGGNNKKQTGRLQKAEGMAAK-ESTSEVALRACFARVREIAHNLGLPSSIQEDACLLLRKV-EDKGLFKVKRDPRGKAMCAAVTYITCRTWSVSRSMKDVSKAVDIPLRDVNKACKHVFKNMDIDKGAVRGTHLIPELCNKLEVPAFITMAAQNVAQKASKLDLVGGMMPSAVAAAAVLL 262
+ C D DA + D R+GD+IC ECG+V+G+R+ID G EWRTFS + DPSR GDA +PLL+ ++ T I G K + + +S+S+ A+ F +R +A + LP+ I + L ++V E K L D A+ A YI CR V R+ K++ I + + + K + K +DI + L+P C+ L +P + MAA +A+KA +LDLV G P +VAAAA+ +
Sbjct: 15 VHCPDHPDAI-LVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNE--KALKDPSRVGDAQNPLLNG-GDLTTMISKGTGAASFDECGKPKYQNRRTKSSSDRAMLNAFEEIRTMADRIHLPAIIIDRTNNLFKQVYEQKSLKGHAHD----AIATACLYIACRQEGVPRTFKEICAVSPISKKKIGRCFKLILKMLDISLDLINPGDLMPRFCSNLGLPKPVRMAANFIARKAVELDLVPGRSPISVAAAAIYM 262
BLAST of mRNA_F-serratus_M_contig139.2800.1 vs. uniprot
Match: T1KYS9_TETUR (Transcription initiation factor IIB n=1 Tax=Tetranychus urticae TaxID=32264 RepID=T1KYS9_TETUR) HSP 1 Score: 128 bits (321), Expect = 4.740e-31 Identity = 86/268 (32.09%), Postives = 145/268 (54.10%), Query Frame = 0
Query: 3 AFREYSMRCSDCKDATDIYFDARSGDVICRECGVVMGERLIDDGQEWRTFSTDDHAGRADPSRCGDAVSPLLSAESNMNTFI------EGGNNKKQTGRLQKAEGMAAKESTSEVALRACFARVREIAHNLGLPSSIQEDACLLLRKVEDKGLFKVKRDPRGKAMCAAVTYITCRTWSVSRSMKDVSKAVDIPLRDVNKACKHVFKNMDIDKGAVRGTHLIPELCNKLEVPAFITMAAQNVAQKASKLDLVGGMMPSAVAAAAVLLVC 264
++R+ + C + DAT I D R+GD+IC ECG+V+G+R+ID G EWRTFS + ADPSR G A +PL+ ++++T I G K + + Q S+SE +L F + ++A + L +I E A LL ++V D K + + A+ +A YI+CR V R+ K++ + +++ + K + K ++ + + + C+ L + + I AA ++A+KA +LD+V G P +VAAAA+ + C
Sbjct: 2 SYRKAKIGCREHPDATLIE-DYRAGDMICSECGLVVGDRVIDVGSEWRTFSNE--KANADPSRVGAAENPLME-NNDLSTIIARAEPNSSGEGFKYSSKKQM--------SSSERSLLNGFKEISDMADKINLAKTIVERANLLFKQVHDSRTTKGRSND---AIASACLYISCRQEGVPRTFKEICAVSKVSKKEIGRCFKLILKALETNVDTITTGDFMVRFCSNLGLSSAIQKAATHIARKAVELDIVPGRSPISVAAAAIYMAC 254
BLAST of mRNA_F-serratus_M_contig139.2800.1 vs. uniprot
Match: A0A484EHJ0_BRELC (TFIIB-type domain-containing protein n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A484EHJ0_BRELC) HSP 1 Score: 127 bits (320), Expect = 6.770e-31 Identity = 85/259 (32.82%), Postives = 135/259 (52.12%), Query Frame = 0
Query: 11 CSDCKDATDIYFDARSGDVICRECGVVMGERLIDDGQEWRTFSTDDHAGR-ADPSRCGDAVSPLLSAESNMNTFIEGGNNKKQTGRLQKAEGMAAKESTSEVALRAC---FARVREIAHNLGLPSSIQEDACLLLRKVEDKGLFKVKRDPRGKAMCAAVTYITCRTWSVSRSMKDVSKAVDIPLRDVNKACKHVFKNMDIDKGAVRGTHLIPELCNKLEVPAFITMAAQNVAQKASKLDLVGGMMPSAVAAAAVLLVCS 265
C +C + D+ D +GDV+CR CG+++GER+IDD EWRTF+ DD G A SR GD L + S ++T++ + KK G ++ S+ ++ AR++E+A L LP I E A + E + + R P ++M AV +I CR S +RS+K+ +A IP R + K+ + + + ++ + C++L +P M A VAQKA +L+L G P AVAA+ + LV +
Sbjct: 10 CREC-GSKDVVTDFSAGDVVCRGCGMILGERIIDDSPEWRTFANDDRGGDPAAKSRVGDVADARLDSLS-LSTYLV--DPKKSGGGADSSKHKRPNISSDSAKVKRMQRNMARIQEVADYLSLPKKIVEVALDIYADAEKQEINM--RGPERESMAVAVLFIACRKASNARSLKEFEEASGIPKRRIGKSFMSLQRQLKLEVKQATTEEYVQRFCSRLGLPNKTQMIAHTVAQKADRLELSNGQPPVAVAASVIYLVAA 262 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig139.2800.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_F-serratus_M_contig139.2800.1 ID=prot_F-serratus_M_contig139.2800.1|Name=mRNA_F-serratus_M_contig139.2800.1|organism=Fucus serratus male|type=polypeptide|length=329bpback to top |