prot_F-serratus_M_contig1381.2768.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1381.2768.1
Unique Nameprot_F-serratus_M_contig1381.2768.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length315
Homology
BLAST of mRNA_F-serratus_M_contig1381.2768.1 vs. uniprot
Match: A0A6H5JND9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JND9_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 1.510e-65
Identity = 149/333 (44.74%), Postives = 189/333 (56.76%), Query Frame = 0
Query:    1 MSGTNRLRRFDLGNKAIEGIFDRSLAGAIVTIASVTLMSVLVISELVAYIKVDTSSHMAVSDFHDHEMVTVRLRATFPFIECKDLEVVADNAWGGPRNSGAIAVDLKPATRSERKPFHQRKSGALAVPRRRSGSGKGSGFARSARDEPRSCETVLRGWPSKGIGGGKQI---------GSQGCSGAQ--RHAHSPRLELPSVGLRGRREGSASRKQVCFGAGAGDRKVLVEGGADLAQACSR---GRGEVVHVLGKRRVYSRERN-----GGGNFLLGVEFAYDFSPVMVRYVDTRKSLLEFITSVCAIVGGVYTVSGLFVRGLFGVWRKKQD 314
            M   +RLRRFDLG KA++G+ D+SL GA+V+IASVTLM+VLVISEL+AYIKVDTSSHMAV+DFH+H+ VT RL ATFPF+ECKDLEVV D+  GG  NS A++V  +PA+++ER PF Q + G L             G     R        V+   PS+ I  G+ +         G +  +G       H      P  G  G    S +R      AG+G    LV+    +     R   G     H       +  E +        + LLGVEF+YDF+ VMV+Y DTR+S+ E ITSVCAIVGG+YTVSGLFVRGL  V  KK D
Sbjct:    1 MFTASRLRRFDLGQKAVQGVLDKSLVGALVSIASVTLMAVLVISELLAYIKVDTSSHMAVADFHEHDAVTARLHATFPFVECKDLEVVTDHPQGGVPNSEAVSVHKRPASKTERYPF-QPQGGGLGCTL--------DGTVTVERAAGTIMIHVMHHDPSRVIFTGRFLARTKGETRSGPKAVAGQNMTHKIHDFGFGPPVKGPVGVGRNSLARSTFVSEAGSG----LVKYSLKVVPIFHRRMHGAEVNTHTYSSNVAFVPEADVLQDLSSSSLLLGVEFSYDFTSVMVKYTDTRRSMFELITSVCAIVGGIYTVSGLFVRGLQVVSPKKHD 320          
BLAST of mRNA_F-serratus_M_contig1381.2768.1 vs. uniprot
Match: A0A7S2UYF2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYF2_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 2.030e-16
Identity = 97/328 (29.57%), Postives = 150/328 (45.73%), Query Frame = 0
Query:    7 LRRFDLGNKAIEGIFDRSLAGAIVTIASVTLMSVLVISELVAYIKVDTSSHMAVSDFHD--HEMVTVRLRATFPFIECKDLEVVADNAWGGPRNSGAIAVDLKPATRSERKPFHQRKSGALAVPRRRSGSGKGSGFARSARDEPRSCETVLRGWPSKGIGGGKQIGSQGCSGAQRHAHSPRLELPSVGLRGRREGSASR-KQVCFGAGAGDRKVL----VEGGADLAQACS---RGRG----EV-----------VHVLGKRRVYSRERN-----GGGNFL--LGVEFAYDFSPVMVRYVDTRKSLLEFITSVCAIVGGVYTVSGLFV 302
            ++  D  +K +  I +++ AGA+V+IAS+ +M++L+ISE+  Y KVD  SHM VS   +   +   V L  TFP + C+DL++  +N  GG       A  +K  + S+     Q K   + +            F   AR +     TV        +GG   I S+      R        L ++ L   + G+      V      GD K+L    + G   L  AC+    G G    EV            H + +   YS   N      G + L  LG+E +YDFSP+MV YV+ ++S+ +F+T++CAI+GGV+T S L V
Sbjct:    7 MKSLDGFSKPMADIQEKTTAGAVVSIASLAIMALLLISEIWLYFKVDVVSHMGVSHLKEGMEQPFDVHLHITFPHMRCEDLDLRVENLKGGD-----AADVMKMLSSSKTLDMRQSKPNEVVL------------FKDEARFKMNETCTVEGSLKLPRVGGSIDIASR------RKPVDIASLLSALFLNTAQLGNVPNVSHVIHELWFGD-KILGGDQMAGSLPLKDACNAVDHGSGLFRYEVKIVPTTYEWLHTHRVKEHYQYSVVENFVKDSAGISSLSTLGLEISYDFSPIMVEYVEQKQSIFQFLTNLCAIMGGVFTTSSLLV 310          
BLAST of mRNA_F-serratus_M_contig1381.2768.1 vs. uniprot
Match: A0A7S2AXB8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AXB8_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.730e-14
Identity = 93/326 (28.53%), Postives = 137/326 (42.02%), Query Frame = 0
Query:    7 LRRFDLGNKAIEGIFDRSLAGAIVTIASVTLMSVLVISELVAYIKVDTSSHMAV-SDFHDHEMVTVRLRATFPFIECKDLEVVADNAWGGPRNSGAIAVDLKPATRSERKPFHQRKSGALAVPRRRSGSGKGSGFARSARDEPRSCETVLRGWPSKGIGGGKQIGSQGCSGAQRHAHSPRLELPS-----VGLRGRREG---SASRKQVCFGAGAGDRKVLVEGGADLAQACSRGRGE----------VVHVLGKRRVYSRERNGGGNFLL-------------GVEFAYDFSPVMVRYVDTRKSLLEFITSVCAIVGGVYTVSGL 300
            L++FD+  KA++G+  R+L GAI+T+AS TL+ +L  SEL+ +  V T  HM V S   D   V + L ATFP + C    +  +   G P      ++   P                          G+G             C   L+G    G  GG    S G +G      SP L+L S      GL G  +G   S +   + FG     R   +E   ++    S   G+          V   L +  VYS + +    F+              G+ F YDF PVMV Y + + S+L+F+T +C I+GG++TVSGL
Sbjct:    5 LKKFDVHVKALDGVRKRTLPGAILTLASSTLIVLLCFSELLVFSSVKTVHHMTVDSAAADRPSVRISLHATFPHLACDSTNLEVEATRGDPTMDVVNSIVKTPV-------------------------GEGG------------CS--LKGELLVGKVGGNFHISTGMAGLPS---SPMLQLSSGLMSATGLMGSFKGVNMSHTIHHLSFGPKFPGRSNPLE---EVTNVVSTDVGQYQFHIKVIPTVYKYLRRSPVYSNQYSLSEQFVKLDLMSALKASSAPGIFFYYDFYPVMVEYDEEKVSILQFLTRICGIIGGIFTVSGL 285          
BLAST of mRNA_F-serratus_M_contig1381.2768.1 vs. uniprot
Match: A0A6A5C3X2_NAEFO (Uncharacterized protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5C3X2_NAEFO)

HSP 1 Score: 69.7 bits (169), Expect = 1.160e-9
Identity = 35/74 (47.30%), Postives = 49/74 (66.22%), Query Frame = 0
Query:  238 HVLGKRRVYSRERNGGGNFLLGVEFAYDFSPVMVRYVDTRKSLLEFITSVCAIVGGVYTVSGLFVRGLFGVWRK 311
            HV  K R++        N + GV F YD SP+MV   + RKSL++F+TS+CAI+GGV+TVS L  R L+GV ++
Sbjct:  342 HVRPKNRLHP-------NVVPGVFFIYDLSPIMVHMKEDRKSLIQFLTSLCAIIGGVFTVSALLDRILYGVEKR 408          
BLAST of mRNA_F-serratus_M_contig1381.2768.1 vs. uniprot
Match: A0A836CMU7_9STRA (Endoplasmic reticulum vesicle transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMU7_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 2.480e-9
Identity = 32/57 (56.14%), Postives = 40/57 (70.18%), Query Frame = 0
Query:  259 GVEFAYDFSPVMVRYVDTRKSLLEFITSVCAIVGGVYTVSGLFVRGLFGVWRK-KQD 314
            GV FAYDF+PVMV   +  +  L F+TS CAIVGGV+T+SGL V  + GV R  K+D
Sbjct:   59 GVHFAYDFTPVMVHREEDAEGFLNFLTSTCAIVGGVFTMSGLLVGLIHGVRRTAKRD 115          
BLAST of mRNA_F-serratus_M_contig1381.2768.1 vs. uniprot
Match: A0A6L5D0S6_9INSE (Uncharacterized protein n=1 Tax=Ephemera danica TaxID=1049336 RepID=A0A6L5D0S6_9INSE)

HSP 1 Score: 67.8 bits (164), Expect = 3.770e-9
Identity = 29/49 (59.18%), Postives = 40/49 (81.63%), Query Frame = 0
Query:  253 GGNFLLGVEFAYDFSPVMVRYVDTRKSLLEFITSVCAIVGGVYTVSGLF 301
            G N + G+ F+Y+ SP+MVRY +T KSL  F+T+VCA+VGGVYTV+G+F
Sbjct:  274 GDNGMPGIFFSYELSPMMVRYTETEKSLGHFLTNVCAMVGGVYTVAGIF 322          
BLAST of mRNA_F-serratus_M_contig1381.2768.1 vs. uniprot
Match: A0A7S1CC96_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CC96_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 3.830e-9
Identity = 29/49 (59.18%), Postives = 42/49 (85.71%), Query Frame = 0
Query:  252 GGGNFLLGVEFAYDFSPVMVRYVDTRKSLLEFITSVCAIVGGVYTVSGL 300
            GGG    GV F ++FSPVMVR V+T++++L+F+TS+CAIVGGV+TV+G+
Sbjct:  235 GGGVQPAGVYFKFEFSPVMVRVVETKRTVLQFLTSICAIVGGVFTVAGM 283          
BLAST of mRNA_F-serratus_M_contig1381.2768.1 vs. uniprot
Match: A0A7S2H164_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H164_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 3.950e-9
Identity = 92/324 (28.40%), Postives = 129/324 (39.81%), Query Frame = 0
Query:    9 RFDLGNKAIEGIFDRSLAGAIVTIASVTLMSVLVISELVAYIKVDTSSHMAVSDFHD----HEMVTVRLRATFPFIECKDLEVVADNAWGGPRNSGAIAVDLKPATRSERKPFHQ-----RKSGALAVPRRRSGSGK-GSGFARSARDEPRSCETVLRGWPSKGIGGG-----KQIGSQGCSGAQRHAHS----------PRLELPSVGLRGRREGSASRKQVCFGAGAGDRKVLVEGGADLAQA-CSRGRGEVVHVLGKRRVYSRERNGGGNFLLGVEFAYDFSPVMVRYVDTRKSLLEFITSVCAIVGGVYTVSGLFVRGLF 306
            +FD   K +EG+  R+  GAI+T+ S  L+ VL+ SEL  +  V+T  HM V            V + L ATF  + C D+ +  +   G   +     VD  P      +   +     R  G L V       GK G  F  SAR       T L     +G+GGG       +G          +H+          P +  P   +         + Q          KV+      L +A     +  +     K  ++S  R    N   GV F YDF P+MV Y D + S LEFIT VC I+GGV+TVS L + G F
Sbjct:   39 QFDRHLKTMEGVRRRTSCGAIMTLLSSALVFVLIASELAVFFNVETVHHMTVDSIGQGTKKEPPVVITLHATFHHLPCDDVHIEIEATRGETTDEFVDKVDKFPIEYKAEEGAPEVVAGCRLDGTLNV-------GKVGGNFHISARGNIHLGMTSL----FQGLGGGLIRMNAPMGGGNPFQGVNLSHTIHELSFGDSFPGMSNPLTDVFNLVPTDVGQYQFHL-------KVIPTLYKFLRKAPIITNQYSLSEQFVKLDIFSVLR---ANSPAGVYFYYDFYPIMVEYHDEKPSFLEFITRVCGIIGGVFTVSSL-IDGAF 340          
BLAST of mRNA_F-serratus_M_contig1381.2768.1 vs. uniprot
Match: A0A7J7KU19_BUGNE (ERGIC3 n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7KU19_BUGNE)

HSP 1 Score: 63.5 bits (153), Expect = 4.250e-9
Identity = 29/61 (47.54%), Postives = 41/61 (67.21%), Query Frame = 0
Query:  253 GGNFLLGVEFAYDFSPVMVRYVDTRKSLLEFITSVCAIVGGVYTVSGLFVRGLFGVWRKKQ 313
            G   L G  F Y+FSP+MV+Y + R+SL  F+TS+CAI+GGV+TV+GL    ++   R  Q
Sbjct:   42 GETGLPGTFFIYEFSPMMVKYKEKRRSLFHFLTSLCAIIGGVFTVAGLIDAAIYHSVRSIQ 102          
BLAST of mRNA_F-serratus_M_contig1381.2768.1 vs. uniprot
Match: A7RGX6_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RGX6_NEMVE)

HSP 1 Score: 67.0 bits (162), Expect = 4.680e-9
Identity = 30/64 (46.88%), Postives = 42/64 (65.62%), Query Frame = 0
Query:  253 GGNFLLGVEFAYDFSPVMVRYVDTRKSLLEFITSVCAIVGGVYTVSGLFVRGLFG---VWRKKQ 313
            GG  L  + F YD SP+ V+Y++ R+ L  FIT+VCAIVGG +TV+G+    +F    +WRK Q
Sbjct:  219 GGQMLPAIWFRYDLSPITVKYIERRQPLYHFITTVCAIVGGTFTVAGIIDSAVFTASEMWRKHQ 282          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1381.2768.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JND9_9PHAE1.510e-6544.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2UYF2_9STRA2.030e-1629.57Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2AXB8_9STRA1.730e-1428.53Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A6A5C3X2_NAEFO1.160e-947.30Uncharacterized protein n=2 Tax=Naegleria TaxID=57... [more]
A0A836CMU7_9STRA2.480e-956.14Endoplasmic reticulum vesicle transporter n=1 Tax=... [more]
A0A6L5D0S6_9INSE3.770e-959.18Uncharacterized protein n=1 Tax=Ephemera danica Ta... [more]
A0A7S1CC96_9STRA3.830e-959.18Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S2H164_9STRA3.950e-928.40Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7J7KU19_BUGNE4.250e-947.54ERGIC3 n=1 Tax=Bugula neritina TaxID=10212 RepID=A... [more]
A7RGX6_NEMVE4.680e-946.88Predicted protein n=1 Tax=Nematostella vectensis T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012936Endoplasmic reticulum vesicle transporter, C-terminalPFAMPF07970COPIIcoated_ERVcoord: 250..300
e-value: 4.0E-11
score: 43.2
IPR039542Endoplasmic reticulum vesicle transporter, N-terminalPFAMPF13850ERGIC_Ncoord: 7..89
e-value: 7.8E-13
score: 48.6
NoneNo IPR availablePANTHERPTHR10984ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEINcoord: 254..305
coord: 4..161
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 272..282
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 51..251
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 252..271
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 283..306
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 25..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 307..314
NoneNo IPR availableTMHMMTMhelixcoord: 28..50
NoneNo IPR availableTMHMMTMhelixcoord: 280..302

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1381contigF-serratus_M_contig1381:26571..38088 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1381.2768.1mRNA_F-serratus_M_contig1381.2768.1Fucus serratus malemRNAF-serratus_M_contig1381 26571..38088 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1381.2768.1 ID=prot_F-serratus_M_contig1381.2768.1|Name=mRNA_F-serratus_M_contig1381.2768.1|organism=Fucus serratus male|type=polypeptide|length=315bp
MSGTNRLRRFDLGNKAIEGIFDRSLAGAIVTIASVTLMSVLVISELVAYI
KVDTSSHMAVSDFHDHEMVTVRLRATFPFIECKDLEVVADNAWGGPRNSG
AIAVDLKPATRSERKPFHQRKSGALAVPRRRSGSGKGSGFARSARDEPRS
CETVLRGWPSKGIGGGKQIGSQGCSGAQRHAHSPRLELPSVGLRGRREGS
ASRKQVCFGAGAGDRKVLVEGGADLAQACSRGRGEVVHVLGKRRVYSRER
NGGGNFLLGVEFAYDFSPVMVRYVDTRKSLLEFITSVCAIVGGVYTVSGL
FVRGLFGVWRKKQD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012936Erv_C
IPR039542Erv_N