prot_F-serratus_M_contig138.2758.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig138.2758.1
Unique Name	prot_F-serratus_M_contig138.2758.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	327

Homology

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BLAST of mRNA_F-serratus_M_contig138.2758.1 vs. uniprot
Match: D8LDC0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDC0_ECTSI)

HSP 1 Score: 237 bits (605), Expect = 5.910e-72
Identity = 161/333 (48.35%), Postives = 200/333 (60.06%), Query Frame = 0

Query:    1 MVFQEIYKEPDFRSMGQSVVRTAMALNESVAFVLAQMTLDGQRAAESDLQLKTDLTKQRHENGRLTMQLRNQNASMEQKLREADHKLRLREKELVDLQEAYKEKSRKCQAWEKAYGNLRSQADRGSGRGGFTPPESPRAGVLRGSNGSYGIHNGEHGAGSGGRGATPMQQRQESPQRNAFGDGGSSQ-RPDEHSSSLRTRTFLGRGGEHSSVASIGGRPSAGA-----SWSMSRPSTYRGGG----SGDRDGSPILRTHQAPGGFSHSITPSPTFPAPP-MTSGRSATKRPETPLAVRGYYSRNTSPSNRAGGTNSGGVASAVRGRFFPMSKS 322
            +VF+E  KEP+  S  Q+ +RTA   NE++ F+ +QM L+ QR AE+   LK ++ K +HE GR+TMQ+RNQNA+ +QK RE +HKLR+R KELVDLQEAYKEK+RKCQAWEKAY NLRSQ    S  GGFTPPESPRAG +RG +GS+   NG  G     +G                G G +   RP +          +G    HSS   + G  + G      SW + RP+T RGG     +GDR  SP+LR     G  SHS+TPSPTF A   M+ GR A KRPETP+ VRGYYSRN SP NR+ G   GG   A    FFP SK+
Sbjct:   86 IVFEEALKEPNHHSSSQAALRTAELANETLGFLFSQMLLENQRGAEATSVLKGEVAKLKHEQGRVTMQMRNQNAAADQKHREMEHKLRVRTKELVDLQEAYKEKNRKCQAWEKAYANLRSQTTDPSRGGGFTPPESPRAGAMRGPSGSF---NGGQGGSMQHQGPXXXXXXXXXXXXXXXGLGVAGMPRPGDR---------IGTNSPHSSNRGVAGYAAGGGRSSRPSWPIPRPNTSRGGSGNGATGDRV-SPMLRPRDGQGHSSHSVTPSPTFSAQQGMSGGRFAPKRPETPMEVRGYYSRNASPGNRSSGA--GGGVGARSSSFFPSSKA 403

[Close]

BLAST of mRNA_F-serratus_M_contig138.2758.1 vs. uniprot
Match: A0A6H5JFE1_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFE1_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 2.800e-34
Identity = 73/121 (60.33%), Postives = 93/121 (76.86%), Query Frame = 0

Query:    4 QEIYKEPDFRSMGQSVVRTAMALNESVAFVLAQMTLDGQRAAESDLQLKTDLTKQRHENGRLTMQLRNQNASMEQKLREADHKLRLREKELVDLQEAYKEKSRKCQAWEKAYGNLRSQADR 124
            QE  KEP++ S  Q+ +RTA   NE++ F+ +QM L+ QR AE+   LK ++ K +HE GR+TMQ+RNQNA+ +QK RE +HKLR+R KELVDLQEAYKEK+RKCQAWEKAY NLRSQ  R
Sbjct:  152 QEALKEPNYHSSSQAALRTAELANETLGFLFSQMLLESQRGAEATSLLKGEVAKLKHEQGRVTMQMRNQNAAADQKQREMEHKLRVRTKELVDLQEAYKEKNRKCQAWEKAYANLRSQGRR 272

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig138.2758.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig138.2758.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LDC0_ECTSI	5.910e-72	48.35	RING-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A6H5JFE1_9PHAE	2.800e-34	60.33	RING-type domain-containing protein n=1 Tax=Ectoca...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 66..114

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig138	contig	F-serratus_M_contig138:727599..731341 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig138.2758.1	mRNA_F-serratus_M_contig138.2758.1	Fucus serratus male	mRNA	F-serratus_M_contig138 727012..732555 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig138.2758.1 ID=prot_F-serratus_M_contig138.2758.1|Name=mRNA_F-serratus_M_contig138.2758.1|organism=Fucus serratus male|type=polypeptide|length=327bp
MVFQEIYKEPDFRSMGQSVVRTAMALNESVAFVLAQMTLDGQRAAESDLQ
LKTDLTKQRHENGRLTMQLRNQNASMEQKLREADHKLRLREKELVDLQEA
YKEKSRKCQAWEKAYGNLRSQADRGSGRGGFTPPESPRAGVLRGSNGSYG
IHNGEHGAGSGGRGATPMQQRQESPQRNAFGDGGSSQRPDEHSSSLRTRT
FLGRGGEHSSVASIGGRPSAGASWSMSRPSTYRGGGSGDRDGSPILRTHQ
APGGFSHSITPSPTFPAPPMTSGRSATKRPETPLAVRGYYSRNTSPSNRA
GGTNSGGVASAVRGRFFPMSKSNTLF*