prot_F-serratus_M_contig138.2756.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig138.2756.1
Unique Nameprot_F-serratus_M_contig138.2756.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length113
Homology
BLAST of mRNA_F-serratus_M_contig138.2756.1 vs. uniprot
Match: K8ZBR0_NANGC (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8ZBR0_NANGC)

HSP 1 Score: 77.0 bits (188), Expect = 3.870e-14
Identity = 34/56 (60.71%), Postives = 44/56 (78.57%), Query Frame = 0
Query:   23 PEEGLYEESRVHENLVWRREVSRGRGLYNGGSTCFLNATLQCLAFLPPLAQHFLEE 78
            PE+G++ ES++H  + W R    G GLYN G+TCFLNATLQCLA+LPPLAQ+FL +
Sbjct:  112 PEKGIFPESKIHPLMTWIRVERVGPGLYNLGNTCFLNATLQCLAYLPPLAQYFLSK 167          
BLAST of mRNA_F-serratus_M_contig138.2756.1 vs. uniprot
Match: A0A4D9CS17_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CS17_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 4.120e-14
Identity = 34/56 (60.71%), Postives = 44/56 (78.57%), Query Frame = 0
Query:   23 PEEGLYEESRVHENLVWRREVSRGRGLYNGGSTCFLNATLQCLAFLPPLAQHFLEE 78
            PE+G++ ES++H  + W R    G GLYN G+TCFLNATLQCLA+LPPLAQ+FL +
Sbjct:  112 PEKGIFPESKIHPLMTWIRVERVGPGLYNLGNTCFLNATLQCLAYLPPLAQYFLSK 167          
BLAST of mRNA_F-serratus_M_contig138.2756.1 vs. uniprot
Match: W7TEV7_9STRA (Ubiquitin carboxyl-terminal hydrolase 36 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEV7_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 4.120e-14
Identity = 34/56 (60.71%), Postives = 44/56 (78.57%), Query Frame = 0
Query:   23 PEEGLYEESRVHENLVWRREVSRGRGLYNGGSTCFLNATLQCLAFLPPLAQHFLEE 78
            PE+G++ ES++H  + W R    G GLYN G+TCFLNATLQCLA+LPPLAQ+FL +
Sbjct:  112 PEKGIFPESKIHPLMTWIRVERVGPGLYNLGNTCFLNATLQCLAYLPPLAQYFLSK 167          
BLAST of mRNA_F-serratus_M_contig138.2756.1 vs. uniprot
Match: A0A6H5JJN5_9PHAE (USP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJN5_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 1.740e-12
Identity = 47/116 (40.52%), Postives = 64/116 (55.17%), Query Frame = 0
Query:    3 VTGGRRTSTLIKRAEEVVGLPEEG--LYEESRVHENLVWRREVSRGRGLYNGGSTCFLNATLQCLAFLPPLAQHFLEEDYKAMP---ASSSKTSVGKRQQAPSRDVLVIVGNLIKQ 113
            V GG     L + AE+ +GLP  G  LY +S++   L W++    G GL N G+TCFLNATLQCL++LPPLAQH L   Y   P   AS     +G  ++    ++L  +    KQ
Sbjct:  223 VAGG--VDDLARLAEKKIGLPPPGKELYLDSKIKACLQWKQVHRMGPGLRNLGNTCFLNATLQCLSYLPPLAQHLLNGFYGHGPQGIASRGPRPMGGFREFTKVEILAAMEQHTKQ 336          
BLAST of mRNA_F-serratus_M_contig138.2756.1 vs. uniprot
Match: A0A6H5JKG0_9PHAE (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG0_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 2.320e-12
Identity = 37/76 (48.68%), Postives = 49/76 (64.47%), Query Frame = 0
Query:    7 RRTSTLIKRAEEVVGLP--EEGLYEESRVHENLVWRREVSRGRGLYNGGSTCFLNATLQCLAFLPPLAQHFLEEDY 80
            R    L +RAE+ + LP  ++ LY ES+V  NL WR     G GL N G+TC+LN+ LQCL+++PPLAQH L   Y
Sbjct:   92 RDIDELARRAEKDIRLPTKQQELYPESQVRPNLTWRWPCQIGVGLENMGNTCYLNSILQCLSYVPPLAQHLLNGGY 167          
BLAST of mRNA_F-serratus_M_contig138.2756.1 vs. uniprot
Match: D8LD98_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD98_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 3.140e-12
Identity = 37/76 (48.68%), Postives = 48/76 (63.16%), Query Frame = 0
Query:    7 RRTSTLIKRAEEVVGLP--EEGLYEESRVHENLVWRREVSRGRGLYNGGSTCFLNATLQCLAFLPPLAQHFLEEDY 80
            R    L + AE+ + LP  E+ LY ES+V  NL WR     G GL N G+TC+LN+ LQCL+++PPLAQH L   Y
Sbjct:   92 RDIEELARHAEKDIRLPTKEQELYPESQVRPNLTWRWPCQIGVGLENMGNTCYLNSILQCLSYVPPLAQHLLNGSY 167          
BLAST of mRNA_F-serratus_M_contig138.2756.1 vs. uniprot
Match: A0A7S2Y1N8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1N8_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 5.240e-9
Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 0
Query:   17 EEVVGLP--EEGLYEESRVHENLVWRREVSR-GRGLYNGGSTCFLNATLQCLAFLPPLAQHFL 76
            E+ VGLP   + +++    +E L W+    R G GLYN G++C+LNATLQCLA++PPLAQH L
Sbjct:   18 EQEVGLPPPSKSIFQLDPFYEWLQWKGGPRRPGPGLYNLGNSCYLNATLQCLAYVPPLAQHLL 80          
BLAST of mRNA_F-serratus_M_contig138.2756.1 vs. uniprot
Match: A0A835YLY7_9STRA (USP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLY7_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 8.220e-9
Identity = 31/60 (51.67%), Postives = 37/60 (61.67%), Query Frame = 0
Query:   37 LVWRREVSRGRGLYNGGSTCFLNATLQCLAFLPPLAQHFLEEDYKAMPASSSKTSVGKRQ 96
            L WR     G GL N G+TCFLNATLQCL + PPL QH L   Y A PA++ +   G+ Q
Sbjct:    1 LEWRELSKVGPGLQNLGNTCFLNATLQCLLYCPPLVQHLLNHKYGA-PAAAQQAHHGRAQ 59          
BLAST of mRNA_F-serratus_M_contig138.2756.1 vs. uniprot
Match: S4RIA5_PETMA (USP domain-containing protein n=5 Tax=Petromyzon marinus TaxID=7757 RepID=S4RIA5_PETMA)

HSP 1 Score: 58.2 bits (139), Expect = 1.310e-8
Identity = 24/45 (53.33%), Postives = 33/45 (73.33%), Query Frame = 0
Query:   36 NLVWRREVSRGRGLYNGGSTCFLNATLQCLAFLPPLAQHFLEEDY 80
            +L W  +V +G GL N G+TCFLNATLQCLA+ PPL  + L +++
Sbjct:    1 SLRWENDVGKGAGLRNLGNTCFLNATLQCLAYTPPLVNYLLLQEH 45          
BLAST of mRNA_F-serratus_M_contig138.2756.1 vs. uniprot
Match: S4RZI2_PETMA (USP domain-containing protein n=1 Tax=Petromyzon marinus TaxID=7757 RepID=S4RZI2_PETMA)

HSP 1 Score: 58.2 bits (139), Expect = 1.310e-8
Identity = 24/45 (53.33%), Postives = 33/45 (73.33%), Query Frame = 0
Query:   36 NLVWRREVSRGRGLYNGGSTCFLNATLQCLAFLPPLAQHFLEEDY 80
            +L W  +V +G GL N G+TCFLNATLQCLA+ PPL  + L +++
Sbjct:    1 SLRWENDVGKGAGLRNLGNTCFLNATLQCLAYTPPLVNYLLLQEH 45          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig138.2756.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
K8ZBR0_NANGC3.870e-1460.71Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nann... [more]
A0A4D9CS17_9STRA4.120e-1460.71Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nann... [more]
W7TEV7_9STRA4.120e-1460.71Ubiquitin carboxyl-terminal hydrolase 36 n=1 Tax=N... [more]
A0A6H5JJN5_9PHAE1.740e-1240.52USP domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6H5JKG0_9PHAE2.320e-1248.68Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ecto... [more]
D8LD98_ECTSI3.140e-1248.68Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ecto... [more]
A0A7S2Y1N8_9STRA5.240e-950.79Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A835YLY7_9STRA8.220e-951.67USP domain-containing protein (Fragment) n=1 Tax=T... [more]
S4RIA5_PETMA1.310e-853.33USP domain-containing protein n=5 Tax=Petromyzon m... [more]
S4RZI2_PETMA1.310e-853.33USP domain-containing protein n=1 Tax=Petromyzon m... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 47..94
e-value: 7.9E-8
score: 32.1
NoneNo IPR availableGENE3D3.90.70.10coord: 41..111
e-value: 8.5E-11
score: 43.4
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00972USP_1coord: 48..63
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 47..113
score: 10.577
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 39..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig138contigF-serratus_M_contig138:705403..708756 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig138.2756.1mRNA_F-serratus_M_contig138.2756.1Fucus serratus malemRNAF-serratus_M_contig138 705403..708757 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig138.2756.1 ID=prot_F-serratus_M_contig138.2756.1|Name=mRNA_F-serratus_M_contig138.2756.1|organism=Fucus serratus male|type=polypeptide|length=113bp
ALVTGGRRTSTLIKRAEEVVGLPEEGLYEESRVHENLVWRREVSRGRGLY
NGGSTCFLNATLQCLAFLPPLAQHFLEEDYKAMPASSSKTSVGKRQQAPS
RDVLVIVGNLIKQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf