prot_F-serratus_M_contig137.2722.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig137.2722.1
Unique Nameprot_F-serratus_M_contig137.2722.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length262
Homology
BLAST of mRNA_F-serratus_M_contig137.2722.1 vs. uniprot
Match: D8LH60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH60_ECTSI)

HSP 1 Score: 268 bits (686), Expect = 1.360e-80
Identity = 148/239 (61.92%), Postives = 167/239 (69.87%), Query Frame = 0
Query:   18 SRRITSLGDEQPSKGHGKNVFDVFWDRPQQQYWLGSRTARAILMEDFYAGAP-PLHESDKQPFRQHLRTDHLGQATRIPEACGSSQVPPPSPPPLPQPQVVAEGAVSTMAAPRSPYITSGEEPILGDLLLDFLHLFGEDFDAAREGFSVRGGGFRFRCHDKPPHPQAGDPIVIEDPLNCMNNVGRSSYCIGQVQRAFFEALTTLKAAMVRVNQDGKEVLASGTINSSLKGNTGLLRHIC 255
            +R   +L +++ ++  G       WDRP+QQYWLGSRTARA LM+DFYAGAP P   + K    + +R   + Q          S VPPP  PPLP+P  V E A   M AP SPYI SGEEP+LG+LLLDFLHLFGEDFD  REGFSVRGGGFRF  HD PPHPQA DPIVIEDPLNCMNNVGRSS+ IGQVQR FFEA TTLKA  VRVNQDG+EVL S T       NTG+LRHIC
Sbjct:  639 ARAANALNEQEKTQASGGGRISS-WDRPRQQYWLGSRTARATLMQDFYAGAPAPAPPASKL---EQVRDSSIIQ----------SSVPPP--PPLPEP--VVETASHPMMAPMSPYIMSGEEPVLGELLLDFLHLFGEDFDMGREGFSVRGGGFRFCVHDHPPHPQASDPIVIEDPLNCMNNVGRSSFGIGQVQRIFFEARTTLKATTVRVNQDGREVLGSDT------HNTGILRHIC 853          
BLAST of mRNA_F-serratus_M_contig137.2722.1 vs. uniprot
Match: A0A6H5KSB0_9PHAE (PAP-associated domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSB0_9PHAE)

HSP 1 Score: 211 bits (537), Expect = 1.430e-65
Identity = 116/174 (66.67%), Postives = 127/174 (72.99%), Query Frame = 0
Query:   61 MEDFYAGAP-PLHESDKQPFRQHLRTDHLGQATRIPEACGSSQVPPPSPPPLPQPQVVAEGAVSTMAAPRSPYITSGEEPILGDLLLDFLHLFGEDFDAAREGFSVRGGGFRFRCHDKPPHPQAGDPIVIEDPLNCMNNVGRSSYCIGQVQRAFFEALTTLKAAMVRVNQDGKE 233
            M+DFYAGAP P   + K    + +R   + Q          S VPPP  PPLP+P  V E A   M AP SPYI SGEEP+LG+LLLDFLHLFGEDFD  REGFSVRGGGFRF  HD PPHPQA DPIVIEDPLNCMNNVGRSS+ IGQVQR FFE LTTLKA +VRVNQDG+E
Sbjct:    1 MQDFYAGAPAPAPPASKL---EQVRDSSIIQ----------SSVPPP--PPLPEP--VVETASHPMMAPMSPYIMSGEEPVLGELLLDFLHLFGEDFDMGREGFSVRGGGFRFCVHDHPPHPQASDPIVIEDPLNCMNNVGRSSFGIGQVQRIFFEVLTTLKATIVRVNQDGRE 157          
BLAST of mRNA_F-serratus_M_contig137.2722.1 vs. uniprot
Match: A0A7S2SK54_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SK54_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.850e-19
Identity = 46/86 (53.49%), Postives = 59/86 (68.60%), Query Frame = 0
Query:  141 LGDLLLDFLHLFGEDFDAAREGFSVRGGGFRFRCHDKPPHPQAGDPIVIEDPLNCMNNVGRSSYCIGQVQRAFFEALTTLKAAMVR 226
            LG+LL+DFL  +G +F A  EGFSVR GGFRF      PHPQA DP+VIEDP+N + NVGR+ Y   Q+QR F  A + L+  ++R
Sbjct:  593 LGELLVDFLRFWGSEFKAGDEGFSVRHGGFRFSLFGTLPHPQASDPVVIEDPINVITNVGRTCYKFTQLQRLFASAHSRLRDGLLR 678          
BLAST of mRNA_F-serratus_M_contig137.2722.1 vs. uniprot
Match: A0A7S2SJ60_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJ60_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 3.100e-19
Identity = 46/86 (53.49%), Postives = 59/86 (68.60%), Query Frame = 0
Query:  141 LGDLLLDFLHLFGEDFDAAREGFSVRGGGFRFRCHDKPPHPQAGDPIVIEDPLNCMNNVGRSSYCIGQVQRAFFEALTTLKAAMVR 226
            LG+LL+DFL  +G +F A  EGFSVR GGFRF      PHPQA DP+VIEDP+N + NVGR+ Y   Q+QR F  A + L+  ++R
Sbjct:  896 LGELLVDFLRFWGSEFKAGDEGFSVRHGGFRFSLFGTLPHPQASDPVVIEDPINVITNVGRTCYKFTQLQRLFASAHSRLRDGLLR 981          
BLAST of mRNA_F-serratus_M_contig137.2722.1 vs. uniprot
Match: UPI001D080094 (non-canonical poly(A) RNA polymerase protein Trf4-1-like isoform X1 n=4 Tax=Coccinellini TaxID=263631 RepID=UPI001D080094)

HSP 1 Score: 62.0 bits (149), Expect = 2.430e-7
Identity = 42/107 (39.25%), Postives = 55/107 (51.40%), Query Frame = 0
Query:  128 PRSPYITSGEEPILGDLLLDFLHLFGEDFDAAREGFSVRGGGFRFRCHDKPPHPQAG---DPIVIEDPLNCMNNVGRSSYCIGQVQRAFFEALTTLKAAMVRVNQDG 231
            PR  Y+ +G    LG LL++F  LFG  F+  + G  +R GG      D       G     + IEDPL   N++GRSSY I QV+RAF  A + L  AM   +Q G
Sbjct:  291 PRPDYLKNGN---LGVLLIEFFELFGRKFNYMKTGIRIRDGGQYINKEDMQKEMIDGYRPSLLCIEDPLLPSNDIGRSSYGILQVKRAFEYAYSVLTNAMHPFSQFG 394          
BLAST of mRNA_F-serratus_M_contig137.2722.1 vs. uniprot
Match: A0A8J4XMZ1_CHIOP (Non-canonical poly(A) RNA polymerase protein Trf4-1 n=2 Tax=Chionoecetes opilio TaxID=41210 RepID=A0A8J4XMZ1_CHIOP)

HSP 1 Score: 57.4 bits (137), Expect = 9.540e-7
Identity = 34/95 (35.79%), Postives = 51/95 (53.68%), Query Frame = 0
Query:  133 ITSGEEPILGDLLLDFLHLFGEDFDAAREGFSVRGGGFRFRCHDKP---PHPQAGDPIVIEDPLNCMNNVGRSSYCIGQVQRAFFEALTTLKAAM 224
            ++  ++  LG +++ F + +G  F   + G SV  GG   R  D P   P      P+ I+DPL   N+VGRSSY I  VQ+AF  A + L+ A+
Sbjct:   10 VSEEDQQDLGRVVVRFFNFYGHVFPYTK-GISVLKGGRYLRIEDVPTEMPGNHRRSPLCIQDPLTLSNDVGRSSYRIWDVQKAFQHAFSVLRLAL 103          
BLAST of mRNA_F-serratus_M_contig137.2722.1 vs. uniprot
Match: A0A7S2LG55_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LG55_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.790e-6
Identity = 40/110 (36.36%), Postives = 55/110 (50.00%), Query Frame = 0
Query:  132 YITSGEEPILGDLLLDFLHLFGEDFDAAREGFSVRGGGFRFRCH--DKPPH---PQAGDPIVIEDPLNCMNNVGRSSYCIGQVQRAFFEALTTLKAAMVRVNQDGKEVLA 236
            Y  SG+   LG LLLDFL L+G DF+    G SVR  G+ F     DK  +   P     I +E+PL+   +VG  +Y I  + R F  A  TL A +    ++   +LA
Sbjct:  400 YGGSGQHFNLGSLLLDFLELYGLDFNYVTTGISVRHDGYYFPKGQLDKKEYFWQPNRPSSIAVENPLDPTMDVGAGAYRIQMISRVFDHAFKTLLAYVSEPMEETDSILA 509          
BLAST of mRNA_F-serratus_M_contig137.2722.1 vs. uniprot
Match: UPI001E2794F7 (terminal nucleotidyltransferase 4B-like isoform X2 n=1 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E2794F7)

HSP 1 Score: 58.5 bits (140), Expect = 3.190e-6
Identity = 39/100 (39.00%), Postives = 51/100 (51.00%), Query Frame = 0
Query:  128 PRSPYITSGEEPILGDLLLDFLHLFGEDFDAAREGFSVRGGGFRFRCHDKPPHPQAG---DPIVIEDPLNCMNNVGRSSYCIGQVQRAFFEALTTLKAAM 224
            PR  Y+  G    LG LL++F  LFG  F+  + G  +R GG      D       G     + IEDPL   N++GRSSY I QV+RAF  A + L  A+
Sbjct:  217 PRPDYLKHGN---LGVLLIEFFELFGRKFNYMKTGIRIRDGGKYINKEDMQKEMIDGYRPSLLCIEDPLLPSNDIGRSSYGILQVKRAFEYAYSVLTNAV 313          
BLAST of mRNA_F-serratus_M_contig137.2722.1 vs. uniprot
Match: F1LEU4_ASCSU (DNA polymerase sigma n=1 Tax=Ascaris suum TaxID=6253 RepID=F1LEU4_ASCSU)

HSP 1 Score: 55.5 bits (132), Expect = 1.130e-5
Identity = 34/90 (37.78%), Postives = 53/90 (58.89%), Query Frame = 0
Query:  141 LGDLLLDFLHLFGEDFDAAREGFSVRGGGFRFRCHD----KPPHPQAGDPIVIEDPLNCMNNVGRSSYCIGQVQRAFFEALTTLKAAMVR 226
            +G LLL+FL L+G++F+  +    +RGGG  + C +    +   P +   + IEDPL   N++GR S+ I  V++AF  AL TL A  +R
Sbjct:    1 MGMLLLNFLQLYGQEFNYMKTALRIRGGG-AYVCKEEMLTRMSRP-SNSMLCIEDPLQPGNDIGRCSHNILFVRQAFEHALCTLCAVFIR 88          
BLAST of mRNA_F-serratus_M_contig137.2722.1 vs. uniprot
Match: UPI001F07F5E6 (terminal nucleotidyltransferase 4A-like isoform X1 n=2 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F07F5E6)

HSP 1 Score: 56.6 bits (135), Expect = 1.720e-5
Identity = 35/87 (40.23%), Postives = 47/87 (54.02%), Query Frame = 0
Query:  141 LGDLLLDFLHLFGEDFDAAREGFSVRGGGFRFRCHDKPPHPQAGDP---IVIEDPLNCMNNVGRSSYCIGQVQRAFFEALTTLKAAM 224
            LG LL++FL L+G DF+  R G  V+ GG      D       G+    + IEDPL   N+VGRSSY + QV++ F  A   L  A+
Sbjct:  401 LGILLIEFLELYGRDFNYLRTGIRVKNGGAYLAKDDMVKSMTNGNRPSMLCIEDPLQPGNDVGRSSYGVLQVKQVFDYAYMVLSHAV 487          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig137.2722.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D8LH60_ECTSI1.360e-8061.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSB0_9PHAE1.430e-6566.67PAP-associated domain-containing protein n=1 Tax=E... [more]
A0A7S2SK54_9STRA2.850e-1953.49Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2SJ60_9STRA3.100e-1953.49Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
UPI001D0800942.430e-739.25non-canonical poly(A) RNA polymerase protein Trf4-... [more]
A0A8J4XMZ1_CHIOP9.540e-735.79Non-canonical poly(A) RNA polymerase protein Trf4-... [more]
A0A7S2LG55_9STRA2.790e-636.36Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
UPI001E2794F73.190e-639.00terminal nucleotidyltransferase 4B-like isoform X2... [more]
F1LEU4_ASCSU1.130e-537.78DNA polymerase sigma n=1 Tax=Ascaris suum TaxID=62... [more]
UPI001F07F5E61.720e-540.23terminal nucleotidyltransferase 4A-like isoform X1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.1410.10coord: 81..241
e-value: 1.5E-18
score: 69.0
NoneNo IPR availablePANTHERPTHR23092POLY(A) RNA POLYMERASEcoord: 140..254
NoneNo IPR availableSUPERFAMILY81631PAP/OAS1 substrate-binding domaincoord: 108..224
IPR002058PAP/25A-associatedPFAMPF03828PAP_assoccoord: 141..194
e-value: 8.3E-7
score: 29.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig137contigF-serratus_M_contig137:511577..513785 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig137.2722.1mRNA_F-serratus_M_contig137.2722.1Fucus serratus malemRNAF-serratus_M_contig137 511497..514042 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig137.2722.1 ID=prot_F-serratus_M_contig137.2722.1|Name=mRNA_F-serratus_M_contig137.2722.1|organism=Fucus serratus male|type=polypeptide|length=262bp
MGTFAAHPRHTDSHGINSRRITSLGDEQPSKGHGKNVFDVFWDRPQQQYW
LGSRTARAILMEDFYAGAPPLHESDKQPFRQHLRTDHLGQATRIPEACGS
SQVPPPSPPPLPQPQVVAEGAVSTMAAPRSPYITSGEEPILGDLLLDFLH
LFGEDFDAAREGFSVRGGGFRFRCHDKPPHPQAGDPIVIEDPLNCMNNVG
RSSYCIGQVQRAFFEALTTLKAAMVRVNQDGKEVLASGTINSSLKGNTGL
LRHICNLDEVT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002058PAP_assoc