prot_F-serratus_M_contig137.2719.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig137.2719.1
Unique Nameprot_F-serratus_M_contig137.2719.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length149
Homology
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BLAST of mRNA_F-serratus_M_contig137.2719.1 vs. uniprot
Match: D8LH60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH60_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 3.630e-48
Identity = 85/107 (79.44%), Postives = 98/107 (91.59%), Query Frame = 0 
Query:    1 HAAEHERQRRIKIVEAMDREEHQERLTRRAWALSAMDEEQRRRAGQQFLLSIQGTNWFQETISSVDLDYEVVCPYSSLGCRHICLRTELEEHLAKNCRFIHEPDDSN 107
            HAAEHERQRR+KI+E MDREEH+ERL RRAWALSAMDEEQRRR  Q+FLLSIQGTNWFQ TIS++DLDYE+ CPYSSLGCRHICLRTEL++HLAK+C+F  EP+ S+
Sbjct:  108 HAAEHERQRRMKILEGMDREEHRERLARRAWALSAMDEEQRRRGSQEFLLSIQGTNWFQGTISTLDLDYEICCPYSSLGCRHICLRTELDKHLAKDCQFNKEPESSD 214
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BLAST of mRNA_F-serratus_M_contig137.2719.1 vs. uniprot
Match: A0A7S1U6N2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U6N2_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 8.750e-18
Identity = 44/99 (44.44%), Postives = 58/99 (58.59%), Query Frame = 0 
Query:    1 HAAEHERQRRIKIVEAMDREEHQERLTRRAWALSAMDEEQRRRAGQQFLLSIQGTNWFQETISSVDLDYEVVCPYSSLGCRHICLRTELEEHLAKNCRF 99
            H  E ER RR++ ++ MDR   +E+  RR WAL A+ +EQ  R    FL  +  T WF   +SS D DYEV+CP+S LGC+  C R EL+ H    C F
Sbjct:    4 HVMELERDRRVRELKEMDRSAEEEQRQRRNWALRAVMQEQANRVQDTFLQEVMNTQWFDSILSSYDQDYEVMCPFSMLGCQFRCTRDELDAHFL-TCEF 101
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BLAST of mRNA_F-serratus_M_contig137.2719.1 vs. uniprot
Match: A0A7R9UCX2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCX2_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 2.210e-12
Identity = 40/116 (34.48%), Postives = 65/116 (56.03%), Query Frame = 0 
Query:    1 HAAEHERQRRIKIVEAMDREEHQERLTRRAWALSAMDEEQRRRAGQQFLLSIQGTNWFQETISSVDLDYEVVCPYSSLGCRHICLRTELEEH--------LAKNCRFIHEPDDSNY 108
            H  E ER RR++ +E ++    +E+  RR+WA+  + +EQ  R  + FL  +  T WF   +S+ +  YEV+CPYS LGC+  C   EL++H        L+KN     +P+++ Y
Sbjct:  177 HVMELERDRRLQELEQIEERAEEEQQQRRSWAIRMVMQEQANRVQEMFLQEVVNTQWFDSILSTYEESYEVMCPYSMLGCQFRCKLEELDDHFLVCEFCDLSKNDLVRQDPEETAY 292
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig137.2719.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LH60_ECTSI3.630e-4879.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1U6N2_9STRA8.750e-1844.44Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7R9UCX2_9STRA2.210e-1234.48Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 119..146
e-value: 5.2E-5
score: 25.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig137contigF-serratus_M_contig137:505406..506932 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig137.2719.1mRNA_F-serratus_M_contig137.2719.1Fucus serratus malemRNAF-serratus_M_contig137 505406..506932 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig137.2719.1 ID=prot_F-serratus_M_contig137.2719.1|Name=mRNA_F-serratus_M_contig137.2719.1|organism=Fucus serratus male|type=polypeptide|length=149bp
HAAEHERQRRIKIVEAMDREEHQERLTRRAWALSAMDEEQRRRAGQQFLL
SIQGTNWFQETISSVDLDYEVVCPYSSLGCRHICLRTELEEHLAKNCRFI
HEPDDSNYSDTQVYASEYEVVCPNTILGCDHSCSRSSLAQHLDTCRFAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD