prot_F-serratus_M_contig137.2699.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig137.2699.1
Unique Nameprot_F-serratus_M_contig137.2699.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length569
Homology
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BLAST of mRNA_F-serratus_M_contig137.2699.1 vs. uniprot
Match: D8LH58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH58_ECTSI)

HSP 1 Score: 297 bits (760), Expect = 2.180e-90
Identity = 186/473 (39.32%), Postives = 267/473 (56.45%), Query Frame = 0 
Query:   96 RPNHWYRQFILLALKSAVGEVGRYLEIKQTRGKGLSAASRELDHRRRAQALQSQLGPLADLVLSSHPDKVNAEAVGRFLDRSQEE-SGTGATLALALLDMGWSMPAPIRPKLGDRVFAAVYEALRRYGLFTRYGALHPPDARLPLVEIEPQRFDASMLESPVFKALEFGTSAASAS----IGILVVGFVFFVCASLSGDVTMTTYAFLFMSALIFEREVLNGAVFNELVNLLRPGLADVASVHEAGHVAMSYLVGCPISTYSLGGLASLKQGADMGSRASCTVIDPELAIARQSFPDESLSWTMDTMEPPTAGSVARDALLTQRVSRKLTPGDESDARLLEDEPLTVMEGEDAGRDESSEIEPDPGQYTMVNRFALSAMGGTVGETLVNGFGMGGRQDQLDLRYTLKSLWPSIPVSDIENTRKWAVTVGLDVLRDDGEAIRLLARNMRETRGLGRLFLDLEASLTRSDYSCTS 563
            R N  YRQ ++LA+KS      RYL    +     S   R L+     +A+Q+ +G L D VLS  PD+ NAEA+ R LDR +E+  G GATLAL  LD  W +PAPIRP +G     AVYEALRR+G+FTR+G +  PD  L   E  P+  +  M +SP+FKA +F T A S S    IG  +V  + +V +   G V  +    L ++ + FEREVL+ A+++E +  ++P L  + S HEAGHVA +YL G P++TY+LGGL SL+ G ++G   SC +I+ EL+ AR   P+E L+      EP              R+  ++T   E  ARL     L     E   +D  +  + + G++ M NR AL++MGG  GE + NGF +GG  D  ++R   K LWP +   D+  T KWA    L + + +  A+ LLA+NMRE R +GRL LDL+ SLT +++  ++
Sbjct:   75 RVNPVYRQMVVLAVKSGAAGAARYLN--PSGESSTSTGKRALN-----KAVQAHVGQLMDAVLSPAPDEENAEAIKRILDRCEEQHKGAGATLALGYLDTVWWLPAPIRPAIGALAILAVYEALRRFGVFTRFGMVKLPDTELAPTETVPEPVEG-MEDSPIFKAAQFETDARSLSYYTLIGAFLVSTMSYVISGGDGQVAWS--GMLLLTFVAFEREVLHSALYSEAIIRVQPMLTQLTSAHEAGHVAAAYLTGLPVATYTLGGLGSLQHGDEVGCGPSCNIINAELSTARIWLPEELLTGPASEPEP--------------RLEARMTYPWEDPARLQNLVELDFSSSEIPHKDRVAPFDTE-GRHAMSNRMALTSMGGIAGEMMANGFDVGGGADYFNMRRRFKGLWPYMSQDDLRRTEKWAFLENLKIFKAERTAMELLAKNMRERRPIGRLMLDLDRSLTSTEFELSA 522
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig137.2699.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LH58_ECTSI2.180e-9039.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33471FAMILY NOT NAMEDcoord: 194..546
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 271..298
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 25..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 299..568
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 38..270
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 33..37
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.471
NoneNo IPR availableTMHMMTMhelixcoord: 266..288

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig137contigF-serratus_M_contig137:78421..83557 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig137.2699.1mRNA_F-serratus_M_contig137.2699.1Fucus serratus malemRNAF-serratus_M_contig137 76800..83705 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig137.2699.1 ID=prot_F-serratus_M_contig137.2699.1|Name=mRNA_F-serratus_M_contig137.2699.1|organism=Fucus serratus male|type=polypeptide|length=569bp
MKHRFIHYSIWCWLTRRRISARHQLVSLVLCTARSSAFISSTRVSTRATC
YSYYASRQATARVAMTSDFDTEQHRQPKIASEDKDTEQTERCRTRRPNHW
YRQFILLALKSAVGEVGRYLEIKQTRGKGLSAASRELDHRRRAQALQSQL
GPLADLVLSSHPDKVNAEAVGRFLDRSQEESGTGATLALALLDMGWSMPA
PIRPKLGDRVFAAVYEALRRYGLFTRYGALHPPDARLPLVEIEPQRFDAS
MLESPVFKALEFGTSAASASIGILVVGFVFFVCASLSGDVTMTTYAFLFM
SALIFEREVLNGAVFNELVNLLRPGLADVASVHEAGHVAMSYLVGCPIST
YSLGGLASLKQGADMGSRASCTVIDPELAIARQSFPDESLSWTMDTMEPP
TAGSVARDALLTQRVSRKLTPGDESDARLLEDEPLTVMEGEDAGRDESSE
IEPDPGQYTMVNRFALSAMGGTVGETLVNGFGMGGRQDQLDLRYTLKSLW
PSIPVSDIENTRKWAVTVGLDVLRDDGEAIRLLARNMRETRGLGRLFLDL
EASLTRSDYSCTSQVENT*
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