prot_F-serratus_M_contig1368.2684.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1368.2684.1
Unique Nameprot_F-serratus_M_contig1368.2684.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length180
Homology
BLAST of mRNA_F-serratus_M_contig1368.2684.1 vs. uniprot
Match: A0A835YQP7_9STRA (SGF29 C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQP7_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 3.320e-10
Identity = 39/132 (29.55%), Postives = 60/132 (45.45%), Query Frame = 0
Query:   14 SLEVIPAILCVCARWMRSPILAVDVARWMRDGSLPFKGCFMHFPESVKMGLGLARHFFMPSTVPSP-------------------QHISNLADRLAAMLGLELPPLNVLAVARRLVDGMGMPAPVLSAVETL 126
            ++E+  A+  + ARW+R  +L +DVAR   DG+LP+   +   P +++  +   R FF P   P+                      I  LA+R A   G ++PPLN   V  RL   +G+P  VL     L
Sbjct:  462 TMELAAALTYLAARWLRLGVLPIDVARXXXDGTLPYINAYERLPSALRDAVRPIRTFFRPQNAPTAAQXXXXXXXXXXXXXXXXXNQIMFLAERFAMAAGADMPPLNAHLVGARLAQALGLPQTVLDTYNAL 593          
BLAST of mRNA_F-serratus_M_contig1368.2684.1 vs. uniprot
Match: A0A200QEW8_9MAGN (Uncharacterized protein n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QEW8_9MAGN)

HSP 1 Score: 56.6 bits (135), Expect = 3.840e-6
Identity = 34/111 (30.63%), Postives = 56/111 (50.45%), Query Frame = 0
Query:   16 EVIPAILCVCARWM-----RSPILAVDVARWMRDGSLPFKGCFM----HF-PESVKMGLGLARHFFMPSTVPSPQHISNLADRLAAMLGLELPPLNVLAVARRLVDGMGMP 116
            ++IP   C+   ++     R  IL  D+ +W  +G LP+   F+    HF P S    L  +   F PS V   + + + A  +A  +GL+LPP+N  A+ARR +  + +P
Sbjct:  225 KIIPLSSCLAVSFLACHVSREAILPTDILKWSLEGKLPYLNAFLNIEKHFGPPSTTCPLS-SSFMFRPSQVVGSRELESQAGSIAQRIGLQLPPVNFYAIARRYLKQLQLP 334          
BLAST of mRNA_F-serratus_M_contig1368.2684.1 vs. uniprot
Match: UPI000E6FEBFC (TATA box-binding protein-associated factor RNA polymerase I subunit B-like n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FEBFC)

HSP 1 Score: 54.3 bits (129), Expect = 2.300e-5
Identity = 36/110 (32.73%), Postives = 53/110 (48.18%), Query Frame = 0
Query:   12 PLSLEVIPAILCVCARWMRSPILAVDVARWMRDGSLPFKGCFMHFPE-----SVKMGLGLARHFFMPSTVPSPQHISNLADRLAAMLGLELPPLNVLAVARRLVDGMGMP 116
            PLSL +  +I  +     R PIL  D+ +W  DG LPF   F    +     S K  L      F P  +   + + + A  +A  +GLELPP+N  A+ARR +  + +P
Sbjct:  218 PLSLSL--SICYLACHIAREPILPTDIVKWAHDGKLPFLNAFDRIGKVFGNPSAKCPLSTDT-MFRPFKIIGWRELESQAGYIAECIGLELPPVNFSALARRYLKQLQLP 324          
BLAST of mRNA_F-serratus_M_contig1368.2684.1 vs. uniprot
Match: A0A8J4GS33_9CHLO (Uncharacterized protein n=5 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GS33_9CHLO)

HSP 1 Score: 53.9 bits (128), Expect = 3.270e-5
Identity = 28/92 (30.43%), Postives = 49/92 (53.26%), Query Frame = 0
Query:   29 MRSPILAVDVARWMRDGSLPFKGCFMHFPESVKMG-LGLARHFFMPSTVPSPQHISNLADRLAAMLGLELPPLNVLAVARRLVDGMGMPAPV 119
            +R P+  +DV RW  D SLP++   +     ++   + ++       T P+P  +   A  +AA+LG E+PPLNV  +  ++ D +G+P  V
Sbjct:  235 LRMPVTPMDVVRWAYDQSLPYQDLRVRATPLIERAPVHVSGRLLQTPTAPNPTLLLAGAVEMAALLGFEIPPLNVDGLLVKMTDSLGLPRAV 326          
BLAST of mRNA_F-serratus_M_contig1368.2684.1 vs. uniprot
Match: A0A4P9Y551_9FUNG (Uncharacterized protein n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y551_9FUNG)

HSP 1 Score: 53.5 bits (127), Expect = 4.270e-5
Identity = 20/52 (38.46%), Postives = 32/52 (61.54%), Query Frame = 0
Query:   13 LSLEVIPAILCVCARWMRSPILAVDVARWMRDGSLPFKGCFMHFPESVKMGL 64
            L L+    +L +  RW+R P+LAVD+ RW  +GSLP+   + + P S+  G+
Sbjct:  286 LQLQTTLGVLLLACRWLRCPVLAVDILRWATEGSLPYLDAYTYLPSSLMEGM 337          
BLAST of mRNA_F-serratus_M_contig1368.2684.1 vs. uniprot
Match: A0A6D2KTZ9_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KTZ9_9BRAS)

HSP 1 Score: 52.8 bits (125), Expect = 7.950e-5
Identity = 34/101 (33.66%), Postives = 56/101 (55.45%), Query Frame = 0
Query:   12 PLSLEVIPAILCVCARWMRSPILAVDVARWMRDGSLPFKGCFMHFPESVKMGLGLA------RHFFMPSTVPSPQHISNLADRLAAMLGLELPPLNVLAVA 106
            PLS  +  + L VC +  R+P+L  D+ RW+ +GS+P++ CF+   E  KMG   A      R  F    + S Q + + A  +A ++GL LPP+++  +A
Sbjct:  244 PLSSSLAISFL-VCHK-ARAPVLPTDIVRWVEEGSVPYRTCFLKIQE--KMGARSAACPVEARIMFGVDEIISAQSLESRAASVADIIGLVLPPVDLNGIA 340          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1368.2684.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A835YQP7_9STRA3.320e-1029.55SGF29 C-terminal domain-containing protein n=1 Tax... [more]
A0A200QEW8_9MAGN3.840e-630.63Uncharacterized protein n=1 Tax=Macleaya cordata T... [more]
UPI000E6FEBFC2.300e-532.73TATA box-binding protein-associated factor RNA pol... [more]
A0A8J4GS33_9CHLO3.270e-530.43Uncharacterized protein n=5 Tax=Volvox reticulifer... [more]
A0A4P9Y551_9FUNG4.270e-538.46Uncharacterized protein n=1 Tax=Piptocephalis cyli... [more]
A0A6D2KTZ9_9BRAS7.950e-533.66Uncharacterized protein n=1 Tax=Microthlaspi errat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033599RNA polymerase I transcription initiation factor TAF1B/Rrn7PANTHERPTHR31576TATA box-binding protein-associated factor RNA polymerase I subunit Bcoord: 20..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1368contigF-serratus_M_contig1368:35849..43114 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1368.2684.1mRNA_F-serratus_M_contig1368.2684.1Fucus serratus malemRNAF-serratus_M_contig1368 35848..43114 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1368.2684.1 ID=prot_F-serratus_M_contig1368.2684.1|Name=mRNA_F-serratus_M_contig1368.2684.1|organism=Fucus serratus male|type=polypeptide|length=180bp
KAQKVPGYTVPPLSLEVIPAILCVCARWMRSPILAVDVARWMRDGSLPFK
GCFMHFPESVKMGLGLARHFFMPSTVPSPQHISNLADRLAAMLGLELPPL
NVLAVARRLVDGMGMPAPVLSAVETLACFSVGNPCAPNPATARKRAFRRV
QGKRPVRSKKTAVTSSPGVSGGGSGSGSKG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033599TAF1B/Rrn7