prot_F-serratus_M_contig1364.2674.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1364.2674.1
Unique Nameprot_F-serratus_M_contig1364.2674.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length273
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1364.2674.1 vs. uniprot
Match: D7G8Y1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Y1_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 1.860e-46
Identity = 88/190 (46.32%), Postives = 120/190 (63.16%), Query Frame = 0 
Query:   51 SWEEDFKQKHAESSLHMAFLHANTWQRDSIVMRMGGYDGFHVLVGLFLVLLLEALFSFDPTGFESVWASNAFLATLVCGTACGVFTIVSTAMIKGKLQRLMIRDLASLNVQQRDRQGRAARLDRLVHKWEAEAHDRQFQPACISYEWYNG---------VRLESPKWVPRALTHPRALKMYGFLSFVAMI 231
            SWE+ FK KH E      FL+AN WQR++I  R+   DGF  L+GLF+VL+LE ++SFDP+ F S    +AFLA LV G +CGVF I S  M++ KLQRLM+RD+A+L VQQ   +   + LD L+ +W+A +  RQFQPACISY+WY+G          ++ S  W P     PR+L  +  L+F A +
Sbjct:   18 SWEDRFKDKHPE------FLNANLWQREAIETRINAQDGFLFLIGLFVVLMLENMWSFDPSTFTSETRLDAFLALLVFGASCGVFAIFSMTMVRLKLQRLMVRDIAALKVQQVTGRANRSLLDGLLARWKASSAQRQFQPACISYDWYHGGGMNTSSFPTKILSKNWNPSC---PRSLVKFAVLAFAATV 198
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1364.2674.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8Y1_ECTSI1.860e-4646.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 89..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 120..143
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 272..273
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..88
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 109..119
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 244..248
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 144..220
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 249..271
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 221..243
NoneNo IPR availableTMHMMTMhelixcoord: 121..143
NoneNo IPR availableTMHMMTMhelixcoord: 221..243
NoneNo IPR availableTMHMMTMhelixcoord: 248..270
NoneNo IPR availableTMHMMTMhelixcoord: 89..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1364contigF-serratus_M_contig1364:114001..126949 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1364.2674.1mRNA_F-serratus_M_contig1364.2674.1Fucus serratus malemRNAF-serratus_M_contig1364 114001..126949 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1364.2674.1 ID=prot_F-serratus_M_contig1364.2674.1|Name=mRNA_F-serratus_M_contig1364.2674.1|organism=Fucus serratus male|type=polypeptide|length=273bp
MIIDNGTNNTSDALNLHGDYSRVYRRIRSSIMSATNSNNSSGSSLPPRVM
SWEEDFKQKHAESSLHMAFLHANTWQRDSIVMRMGGYDGFHVLVGLFLVL
LLEALFSFDPTGFESVWASNAFLATLVCGTACGVFTIVSTAMIKGKLQRL
MIRDLASLNVQQRDRQGRAARLDRLVHKWEAEAHDRQFQPACISYEWYNG
VRLESPKWVPRALTHPRALKMYGFLSFVAMIASFGVAVAIRIADSKGMAW
SLFFVVVVGVAAIFPVIFVLLTA
back to top