prot_F-serratus_M_contig1358.2650.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1358.2650.1
Unique Nameprot_F-serratus_M_contig1358.2650.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length61
Homology
BLAST of mRNA_F-serratus_M_contig1358.2650.1 vs. uniprot
Match: D7G6V7_ECTSI (Protein kish n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6V7_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 1.240e-27
Identity = 45/56 (80.36%), Postives = 52/56 (92.86%), Query Frame = 0
Query:    1 MICICTYIRGYRRGIFDVEDGSRHGLRGVCWKASRVGERLSPYVSASLLVMAVHVL 56
            +IC+CTY+RGYR+GIFDVEDGS  GLRG+CWKA+RVGERLSPYVSA+LLVMA  VL
Sbjct:   17 LICVCTYVRGYRKGIFDVEDGSHSGLRGLCWKAARVGERLSPYVSAALLVMAGRVL 72          
BLAST of mRNA_F-serratus_M_contig1358.2650.1 vs. uniprot
Match: A0A835YW34_9STRA (Protein kish n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW34_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 1.150e-19
Identity = 36/59 (61.02%), Postives = 45/59 (76.27%), Query Frame = 0
Query:    1 MICICTYIRGYRRGIFD--VEDGSRHGLRGVCWKASRVGERLSPYVSASLLVMAVHVLF 57
            +IC CTY+RG+R GIFD   E     G +G+CWK SR+GER+SPYVS S L+MAVH+LF
Sbjct:   17 LICTCTYLRGFRSGIFDNSAEPHRHTGFKGLCWKFSRIGERISPYVSVSCLLMAVHILF 75          
BLAST of mRNA_F-serratus_M_contig1358.2650.1 vs. uniprot
Match: F0WK68_9STRA (Protein kish n=2 Tax=Albugo TaxID=65356 RepID=F0WK68_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.460e-15
Identity = 32/59 (54.24%), Postives = 42/59 (71.19%), Query Frame = 0
Query:    2 ICICTYIRGYRRGIFD--VEDGSRHGLRGVCWKASRVGERLSPYVSASLLVMAVHVLFF 58
            IC C+YIR     +FD   + G   GL G+CWKASR+GER SPYV+ +L++MA+H LFF
Sbjct:   18 ICTCSYIRAKFPTVFDRNQQPGKHEGLSGLCWKASRIGERKSPYVAGALILMALHTLFF 76          
BLAST of mRNA_F-serratus_M_contig1358.2650.1 vs. uniprot
Match: F0Y3L9_AURAN (Protein kish n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3L9_AURAN)

HSP 1 Score: 71.2 bits (173), Expect = 7.480e-15
Identity = 33/70 (47.14%), Postives = 41/70 (58.57%), Query Frame = 0
Query:    1 MICICTYIRGYRRGIFD------------VEDGSRHGLRGVCWKASRVGERLSPYVSASLLVMAVHVLFF 58
            +IC CTY+R  R  +FD            +    R G+RG CWKASR+GERLSPYVS  +  MA H+L F
Sbjct:   17 IICTCTYVRAMRPSVFDGGLSADDLASPHLSYKRRSGIRGACWKASRIGERLSPYVSVVVAAMAFHILLF 86          
BLAST of mRNA_F-serratus_M_contig1358.2650.1 vs. uniprot
Match: K3X7N3_GLOUD (Protein kish n=4 Tax=Pythiaceae TaxID=4782 RepID=K3X7N3_GLOUD)

HSP 1 Score: 70.5 bits (171), Expect = 1.200e-14
Identity = 34/60 (56.67%), Postives = 40/60 (66.67%), Query Frame = 0
Query:    2 ICICTYIRGYRRGIFD--VEDGSRHGLRGVCWKASRVGERLSPYVSASLLVMAVHVLFFA 59
            IC CTYIR     IFD   + G   GL G+CWKASR+GER SPYV+  L+VMA H L F+
Sbjct:   18 ICTCTYIRMKFPTIFDRGQQPGKHEGLSGLCWKASRIGERKSPYVAGVLVVMAFHTLLFS 77          
BLAST of mRNA_F-serratus_M_contig1358.2650.1 vs. uniprot
Match: A0A024TZQ1_9STRA (Protein kish n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024TZQ1_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.230e-14
Identity = 36/61 (59.02%), Postives = 40/61 (65.57%), Query Frame = 0
Query:    1 MICICTYIRGYRRGIFDVED--GSRHGLRGVCWKASRVGERLSPYVSASLLVMAVHVLFFA 59
            +IC CTYIR     IFD     G   G  G+CWKASR+GER S YV+A LL MAVH LFFA
Sbjct:   17 IICTCTYIRLKMPTIFDRGQLPGKHEGFTGLCWKASRIGERKSEYVAALLLAMAVHRLFFA 77          
BLAST of mRNA_F-serratus_M_contig1358.2650.1 vs. uniprot
Match: D0NVB3_PHYIT (Protein kish n=18 Tax=Peronosporaceae TaxID=4777 RepID=D0NVB3_PHYIT)

HSP 1 Score: 69.3 bits (168), Expect = 3.420e-14
Identity = 33/60 (55.00%), Postives = 42/60 (70.00%), Query Frame = 0
Query:    2 ICICTYIRGYRRGIFDVED--GSRHGLRGVCWKASRVGERLSPYVSASLLVMAVHVLFFA 59
            IC CTYI+     +FD     G   GL G+CWKASR+GER S YV+++L+VMAVH LFF+
Sbjct:   18 ICTCTYIKMKFPTLFDRGQLPGKHEGLGGLCWKASRIGERKSQYVASALVVMAVHTLFFS 77          
BLAST of mRNA_F-serratus_M_contig1358.2650.1 vs. uniprot
Match: A0A6G0XHW2_9STRA (Protein kish n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHW2_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 7.080e-14
Identity = 34/62 (54.84%), Postives = 39/62 (62.90%), Query Frame = 0
Query:    1 MICICTYIRGYRRGIFD--VEDGSRHGLRGVCWKASRVGERLSPYVSASLLVMAVHVLFFAG 60
            +IC CT+IR     IFD   E G   G  G+CWKASR+GER S YV+  LL MAVH L FA 
Sbjct:   17 VICTCTFIRMKMPTIFDRGQEPGKHEGFTGLCWKASRIGERKSEYVALMLLAMAVHRLLFAA 78          
BLAST of mRNA_F-serratus_M_contig1358.2650.1 vs. uniprot
Match: A0A8J5IYH4_9STRA (Protein kish n=2 Tax=Phytophthora TaxID=4783 RepID=A0A8J5IYH4_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 7.900e-14
Identity = 33/60 (55.00%), Postives = 41/60 (68.33%), Query Frame = 0
Query:    2 ICICTYIRGYRRGIFDVED--GSRHGLRGVCWKASRVGERLSPYVSASLLVMAVHVLFFA 59
            IC CTYI+     +FD     G   GL G+CWKASR+GER S YV+ +L+VMAVH LFF+
Sbjct:   37 ICTCTYIKMKFPTLFDRGQLPGKHEGLGGLCWKASRIGERKSQYVAGALVVMAVHTLFFS 96          
BLAST of mRNA_F-serratus_M_contig1358.2650.1 vs. uniprot
Match: A0A1E7FGH4_9STRA (Protein kish n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FGH4_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 8.420e-14
Identity = 33/57 (57.89%), Postives = 38/57 (66.67%), Query Frame = 0
Query:    1 MICICTYIRGYRRGIFDVEDGSRHGLRGVCWKASRVGERLSPYVSASLLVMAVHVLF 57
            MIC   Y+R  R GIFD   G+R G  G CWK SRVGER+SP+V A  L MA +VLF
Sbjct:   17 MICTSCYLRELRPGIFD---GNRTGFGGFCWKMSRVGERMSPFVGAGCLFMAAYVLF 70          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1358.2650.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6V7_ECTSI1.240e-2780.36Protein kish n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A835YW34_9STRA1.150e-1961.02Protein kish n=1 Tax=Tribonema minus TaxID=303371 ... [more]
F0WK68_9STRA1.460e-1554.24Protein kish n=2 Tax=Albugo TaxID=65356 RepID=F0WK... [more]
F0Y3L9_AURAN7.480e-1547.14Protein kish n=1 Tax=Aureococcus anophagefferens T... [more]
K3X7N3_GLOUD1.200e-1456.67Protein kish n=4 Tax=Pythiaceae TaxID=4782 RepID=K... [more]
A0A024TZQ1_9STRA1.230e-1459.02Protein kish n=5 Tax=Aphanomyces TaxID=100860 RepI... [more]
D0NVB3_PHYIT3.420e-1455.00Protein kish n=18 Tax=Peronosporaceae TaxID=4777 R... [more]
A0A6G0XHW2_9STRA7.080e-1454.84Protein kish n=1 Tax=Aphanomyces euteiches TaxID=1... [more]
A0A8J5IYH4_9STRA7.900e-1455.00Protein kish n=2 Tax=Phytophthora TaxID=4783 RepID... [more]
A0A1E7FGH4_9STRA8.420e-1457.89Protein kish n=1 Tax=Fragilariopsis cylindrus CCMP... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009653Protein kishPFAMPF06842DUF1242coord: 1..31
e-value: 6.9E-9
score: 35.4
NoneNo IPR availablePANTHERPTHR13229:SF2PROTEIN KISH-Acoord: 1..57
NoneNo IPR availablePANTHERPTHR13229FAMILY NOT NAMEDcoord: 1..57
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..59
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 60..60
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..39
NoneNo IPR availableTMHMMTMhelixcoord: 40..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1358contigF-serratus_M_contig1358:227395..228004 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1358.2650.1mRNA_F-serratus_M_contig1358.2650.1Fucus serratus malemRNAF-serratus_M_contig1358 226765..234603 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1358.2650.1 ID=prot_F-serratus_M_contig1358.2650.1|Name=mRNA_F-serratus_M_contig1358.2650.1|organism=Fucus serratus male|type=polypeptide|length=61bp
MICICTYIRGYRRGIFDVEDGSRHGLRGVCWKASRVGERLSPYVSASLLV
MAVHVLFFAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009653Ksh1